Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq449735 178 1e-39 seq509673 125 8e-24 >seq449735 Length=3187 Score = 178 bits (196), Expect = 1e-39 Identities = 347/510 (68%), Gaps = 7/510 (1%) Strand=Plus/Minus Query 142900 TCTTGGTCTTCAAAATAAGAATAATAAAGCTCGCCACCCATTTCATGAGGACTAAACAGG 142959 ||||||||||||||| | | || ||||| ||| || ||| || ||||||| | Sbjct 533 TCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAG 477 Query 142960 GTAATATAATCATTCTTACCGAAACGTTCCATCATCAGGTCGTTTAACTGGATTCCGTAG 143019 ||||| || || | ||| ||||| ||| || | || ||||| | ||||| Sbjct 476 GTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAA 417 Query 143020 TCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGATTT 143079 || | |||||| | ||||| ||||| || || ||| ||||| || || | ||| ||| Sbjct 416 TCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTT 357 Query 143080 TCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCAC 143137 || ||||| |||||||||| || || | ||| || || ||||||||||| | || | Sbjct 356 TCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGC 299 Query 143138 CTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCAGTAT 143197 |||| ||||| |||||| || || || || || || | || |||||| ||| |||| Sbjct 298 CTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTAT 239 Query 143198 GTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTAATAC 143257 | | |||| || ||| ||| | ||| |||||||| ||| ||||||| | Sbjct 238 GGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGC 179 Query 143258 CAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAATAGATT 143317 |||| || ||||||| || | ||||| || |||| | || |||||| || | Sbjct 178 CAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAAT 119 Query 143318 TCAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGTACGTG 143377 || ||| || || || | ||||| || ||||| || || ||||| ||||| Sbjct 118 CAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAA 59 Query 143378 CACCAGCCATAATAGGAGTAGGCAACGAAA 143407 |||| |||||||| || ||||| | |||| Sbjct 58 CACCTGCCATAATTGGCGTAGGTAGTGAAA 29 >seq509673 Length=441 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 143002 TTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTT 143061 |||||||| | ||||| ||||||||||| | |||||| || || || || ||| ||| Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281 Query 143062 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 143121 ||||| || | | |||||||| |||||||| | || ||| | || || || Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341 Query 143122 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 143181 |||||||||| || |||||||| || ||||||||||||| ||||| |||| ||||| Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401 Query 143182 GGAATAACACCAGTATG 143198 || ||| ||| ||||| Sbjct 402 GGGATACAACCCGTATG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544912127067120