Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_012741.1
Length=171451
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 178 1e-39
seq509673 125 8e-24
>seq449735
Length=3187
Score = 178 bits (196), Expect = 1e-39
Identities = 347/510 (68%), Gaps = 7/510 (1%)
Strand=Plus/Minus
Query 142900 TCTTGGTCTTCAAAATAAGAATAATAAAGCTCGCCACCCATTTCATGAGGACTAAACAGG 142959
||||||||||||||| | | || ||||| ||| || ||| || ||||||| |
Sbjct 533 TCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAG 477
Query 142960 GTAATATAATCATTCTTACCGAAACGTTCCATCATCAGGTCGTTTAACTGGATTCCGTAG 143019
||||| || || | ||| ||||| ||| || | || ||||| | |||||
Sbjct 476 GTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAA 417
Query 143020 TCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGATTT 143079
|| | |||||| | ||||| ||||| || || ||| ||||| || || | ||| |||
Sbjct 416 TCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTT 357
Query 143080 TCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCAC 143137
|| ||||| |||||||||| || || | ||| || || ||||||||||| | || |
Sbjct 356 TCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGC 299
Query 143138 CTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCAGTAT 143197
|||| ||||| |||||| || || || || || || | || |||||| ||| ||||
Sbjct 298 CTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTAT 239
Query 143198 GTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTAATAC 143257
| | |||| || ||| ||| | ||| |||||||| ||| ||||||| |
Sbjct 238 GGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGC 179
Query 143258 CAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAATAGATT 143317
|||| || ||||||| || | ||||| || |||| | || |||||| || |
Sbjct 178 CAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAAT 119
Query 143318 TCAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGTACGTG 143377
|| ||| || || || | ||||| || ||||| || || ||||| |||||
Sbjct 118 CAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAA 59
Query 143378 CACCAGCCATAATAGGAGTAGGCAACGAAA 143407
|||| |||||||| || ||||| | ||||
Sbjct 58 CACCTGCCATAATTGGCGTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 143002 TTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTT 143061
|||||||| | ||||| ||||||||||| | |||||| || || || || ||| |||
Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281
Query 143062 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 143121
||||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341
Query 143122 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 143181
|||||||||| || |||||||| || ||||||||||||| ||||| |||| |||||
Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401
Query 143182 GGAATAACACCAGTATG 143198
|| ||| ||| |||||
Sbjct 402 GGGATACAACCCGTATG 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544912127067120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |