Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq495785 86.0 2e-12 >seq495785 Length=475 Score = 86.0 bits (94), Expect = 2e-12 Identities = 214/320 (67%), Gaps = 5/320 (2%) Strand=Plus/Plus Query 8786 TTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCGGATCTGAAATGCGGGCCACCGAGG 8845 |||||||||| ||| ||||| || ||| | ||| | ||||| | || || Sbjct 69 TTGACTACCTACAGTTGATG-CGTGTGCCCGCGTT--AAGTGAAAACAGAACCTTAGAAA 125 Query 8846 TCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCG 8905 | |||||||| ||||| || | ||| |||| |||||||| | ||| | || | Sbjct 126 TTGCCGAAATTTCGCGGTCATTGAAATCCCTTGCTAAGGAACTTAAATGTCCTGTTATTG 185 Query 8906 CGCTGTCGCAGCTTAATCGAGGGCTCG-AGAATCGCCCAAACAAGCGGCCCGTCATGTCC 8964 | | || |||||||| || | | | || | || | | ||||| || || | || Sbjct 186 CCTTATCACAGCTTAACCGCTCGTTTGGAGCAACGTGCTGATAAGCGCCCAGTTAACTCG 245 Query 8965 GATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGC 9024 ||||| || || || ||| |||| |||||||||||||| | || | ||||| || || Sbjct 246 GATCTACGTGAATCAGGTTCGATTGAGCAGGATGCCGATTTAATTATGTTTATTTATCGT 305 Query 9025 GATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAG 9084 ||||| || |||||| || ||||| | || ||||||||||| || | || Sbjct 306 GATGAAGTTTATAACGATGATTCGCCAGAT-AAAGCACCGCCGAAATCATTATCGGTAAA 364 Query 9085 CAGCGAAACGGGCCGATTGG 9104 || || ||||| || ||||| Sbjct 365 CAACGTAACGGCCCAATTGG 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126749672568792