Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq495785 86.0 2e-12
>seq495785
Length=475
Score = 86.0 bits (94), Expect = 2e-12
Identities = 214/320 (67%), Gaps = 5/320 (2%)
Strand=Plus/Plus
Query 8786 TTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCGGATCTGAAATGCGGGCCACCGAGG 8845
|||||||||| ||| ||||| || ||| | ||| | ||||| | || ||
Sbjct 69 TTGACTACCTACAGTTGATG-CGTGTGCCCGCGTT--AAGTGAAAACAGAACCTTAGAAA 125
Query 8846 TCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCG 8905
| |||||||| ||||| || | ||| |||| |||||||| | ||| | || |
Sbjct 126 TTGCCGAAATTTCGCGGTCATTGAAATCCCTTGCTAAGGAACTTAAATGTCCTGTTATTG 185
Query 8906 CGCTGTCGCAGCTTAATCGAGGGCTCG-AGAATCGCCCAAACAAGCGGCCCGTCATGTCC 8964
| | || |||||||| || | | | || | || | | ||||| || || | ||
Sbjct 186 CCTTATCACAGCTTAACCGCTCGTTTGGAGCAACGTGCTGATAAGCGCCCAGTTAACTCG 245
Query 8965 GATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGC 9024
||||| || || || ||| |||| |||||||||||||| | || | ||||| || ||
Sbjct 246 GATCTACGTGAATCAGGTTCGATTGAGCAGGATGCCGATTTAATTATGTTTATTTATCGT 305
Query 9025 GATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAG 9084
||||| || |||||| || ||||| | || ||||||||||| || | ||
Sbjct 306 GATGAAGTTTATAACGATGATTCGCCAGAT-AAAGCACCGCCGAAATCATTATCGGTAAA 364
Query 9085 CAGCGAAACGGGCCGATTGG 9104
|| || ||||| || |||||
Sbjct 365 CAACGTAACGGCCCAATTGG 384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126749672568792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |