Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_013647.1 Length=41119 Score E Sequences producing significant alignments: (Bits) Value seq512931 156 1e-33 >seq512931 Length=538 Score = 156 bits (172), Expect = 1e-33 Identities = 354/526 (67%), Gaps = 46/526 (9%) Strand=Plus/Plus Query 39186 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39245 || ||||||||||| || || ||||| |||||| |||| || | |||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 39246 GCCGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCC 39305 || || ||| |||||||||||||||| ||| | ||||| ||||||| || || || | Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127 Query 39306 CGAGAGA--AACTCTGGACGCTTGTTCAGGAGTTCGCCGCACTGTTGAAACCTTTACCGA 39363 | || || | || | ||| || |||| |||| || | |||| ||| || Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182 Query 39364 CTAGCCGTGTTATCTATCTGGGTACTCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 39423 | || | ||||| |||| || || |||||||| ||||| ||||||| |||||||| Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 39424 AGGACAACCGTGGGTACTCCACCATCATCTGGCCTGCGCAGTATCCTCGCTCCAAAGAGG 39483 ||| |||| || ||||| || | ||||||||||| | || ||||| | | || Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGG 295 Query 39484 AAGACCT---GTACTA-TGG--CGAC---------------CGACTGGCCC---CTATGC 39519 ||||| || ||| ||| || | || |||| || | |||| Sbjct 296 CTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355 Query 39520 TCCGTAGTGAGTACGATGAGGACAAAGAGGGCCTCAGTAGCCAACCTACCGACCCGGTTC 39579 || | ||| || || ||| | || || | | | ||||| ||||| ||| Sbjct 356 TC---AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA---AGCCTACAGACCCTATTC 409 Query 39580 GATTCGACTCTATGGACCTTCAGGAACGTGAGGTGGAATATGGCAAAGCTGGCTATACGC 39639 ||||||| | ||||| | || || || | ||||||||| | ||||| | | Sbjct 410 GATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTC 469 Query 39640 TTCAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCC 39685 | ||||||||||||||||||||||| || ||| |||||||||||| Sbjct 470 TACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130638850388844