Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_013647.1
Length=41119
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 156 1e-33
>seq512931
Length=538
Score = 156 bits (172), Expect = 1e-33
Identities = 354/526 (67%), Gaps = 46/526 (9%)
Strand=Plus/Plus
Query 39186 CCGGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACGGGTCAGCTTACTGGTAGCCGT 39245
|| ||||||||||| || || ||||| |||||| |||| || | ||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 39246 GCCGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGTGCC 39305
|| || ||| |||||||||||||||| ||| | ||||| ||||||| || || || |
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127
Query 39306 CGAGAGA--AACTCTGGACGCTTGTTCAGGAGTTCGCCGCACTGTTGAAACCTTTACCGA 39363
| || || | || | ||| || |||| |||| || | |||| ||| ||
Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182
Query 39364 CTAGCCGTGTTATCTATCTGGGTACTCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 39423
| || | ||||| |||| || || |||||||| ||||| ||||||| ||||||||
Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241
Query 39424 AGGACAACCGTGGGTACTCCACCATCATCTGGCCTGCGCAGTATCCTCGCTCCAAAGAGG 39483
||| |||| || ||||| || | ||||||||||| | || ||||| | | ||
Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGG 295
Query 39484 AAGACCT---GTACTA-TGG--CGAC---------------CGACTGGCCC---CTATGC 39519
||||| || ||| ||| || | || |||| || | ||||
Sbjct 296 CTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355
Query 39520 TCCGTAGTGAGTACGATGAGGACAAAGAGGGCCTCAGTAGCCAACCTACCGACCCGGTTC 39579
|| | ||| || || ||| | || || | | | ||||| ||||| |||
Sbjct 356 TC---AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA---AGCCTACAGACCCTATTC 409
Query 39580 GATTCGACTCTATGGACCTTCAGGAACGTGAGGTGGAATATGGCAAAGCTGGCTATACGC 39639
||||||| | ||||| | || || || | ||||||||| | ||||| | |
Sbjct 410 GATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTC 469
Query 39640 TTCAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCC 39685
| ||||||||||||||||||||||| || ||| ||||||||||||
Sbjct 470 TACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130638850388844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |