Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_013651.1 Length=38497 Score E Sequences producing significant alignments: (Bits) Value seq512931 246 7e-61 >seq512931 Length=538 Score = 246 bits (272), Expect = 7e-61 Identities = 378/534 (71%), Gaps = 25/534 (5%) Strand=Plus/Plus Query 36423 CCTGACCACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGT 36482 ||||||||| || || || || || |||||| | || || | || ||| ||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 36483 GCAGACATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCGACACAGGCTGCA 36542 || ||||| ||||||||||||||||||||||| || ||||||| |||||| | ||| Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129 Query 36543 AGAGACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCCTAATGGTACT 36602 || || | ||||| ||||| |||||||| || || || ||| | |||||| | ||||| Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189 Query 36603 ATCATCTACCTTGGTACTCCACAATGCGAAATGACGCTATACAGAGAGCTTGAGAACCGT 36662 ||||||||| | || || ||||| ||||||||| || ||||| || |||||| |||| Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249 Query 36663 GGTTACAAGACTACTATCTGGCCAGCTCGTTATCCTAAAGATATGAATGATTTAGAGACT 36722 || ||| ||| || |||||||| || || || ||| ||| || ||| | ||| | Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309 Query 36723 TAC------------GGTAATCGTCTTGCACCAATG---CTTA--AAGATGAACTA-ATG 36764 ||| || || || || ||| || |||| | | | || | || Sbjct 310 TACTGGCACGCCAAGGGCAAGCG-CT--CACGTCTGGACCTTACCATGCTCAAGGAGCTG 366 Query 36765 GAGAAC--CCTGAAGCTTACTGGTGGCAACCTACTGACCCTGTGCGATTCGATGATGAAG 36822 || || | |||||| | ||| | ||||| |||||| | |||||||||||||||| Sbjct 367 GAAGACGACGAGAAGCT--GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAG 424 Query 36823 ACTTACGGGAACGTGAGCTGTCTTATGGTAAAGCTGGTTTTGCTCTACAGTTCATGTTGA 36882 || | || || || || || || ||||| || | ||| || ||||||||||||||| | | Sbjct 425 ACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCA 484 Query 36883 ACCCTAACCTGAGTGATGCTGAGAAATACCCTCTGAAGCTTCGTGATTTCATCG 36936 |||| ||||| || || ||||| ||||| ||||||| ||||||| |||| Sbjct 485 ACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122300809306116