Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_013651.1
Length=38497
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 246 7e-61
>seq512931
Length=538
Score = 246 bits (272), Expect = 7e-61
Identities = 378/534 (71%), Gaps = 25/534 (5%)
Strand=Plus/Plus
Query 36423 CCTGACCACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGT 36482
||||||||| || || || || || |||||| | || || | || ||| |||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 36483 GCAGACATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCGACACAGGCTGCA 36542
|| ||||| ||||||||||||||||||||||| || ||||||| |||||| | |||
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129
Query 36543 AGAGACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCCTAATGGTACT 36602
|| || | ||||| ||||| |||||||| || || || ||| | |||||| | |||||
Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189
Query 36603 ATCATCTACCTTGGTACTCCACAATGCGAAATGACGCTATACAGAGAGCTTGAGAACCGT 36662
||||||||| | || || ||||| ||||||||| || ||||| || |||||| ||||
Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249
Query 36663 GGTTACAAGACTACTATCTGGCCAGCTCGTTATCCTAAAGATATGAATGATTTAGAGACT 36722
|| ||| ||| || |||||||| || || || ||| ||| || ||| | ||| |
Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309
Query 36723 TAC------------GGTAATCGTCTTGCACCAATG---CTTA--AAGATGAACTA-ATG 36764
||| || || || || ||| || |||| | | | || | ||
Sbjct 310 TACTGGCACGCCAAGGGCAAGCG-CT--CACGTCTGGACCTTACCATGCTCAAGGAGCTG 366
Query 36765 GAGAAC--CCTGAAGCTTACTGGTGGCAACCTACTGACCCTGTGCGATTCGATGATGAAG 36822
|| || | |||||| | ||| | ||||| |||||| | ||||||||||||||||
Sbjct 367 GAAGACGACGAGAAGCT--GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAG 424
Query 36823 ACTTACGGGAACGTGAGCTGTCTTATGGTAAAGCTGGTTTTGCTCTACAGTTCATGTTGA 36882
|| | || || || || || || ||||| || | ||| || ||||||||||||||| | |
Sbjct 425 ACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCA 484
Query 36883 ACCCTAACCTGAGTGATGCTGAGAAATACCCTCTGAAGCTTCGTGATTTCATCG 36936
|||| ||||| || || ||||| ||||| ||||||| ||||||| ||||
Sbjct 485 ACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122300809306116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |