Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_013691.1
Length=74901
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 298 3e-76
seq488807 192 3e-44
seq255804 165 4e-36
>seq486019
Length=823
Score = 298 bits (330), Expect = 3e-76
Identities = 457/653 (70%), Gaps = 10/653 (2%)
Strand=Plus/Plus
Query 66895 TCCTGAATCAGACGGTCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTG 66954
|| ||||| ||||| || || || ||||||||||| | ||| || |||||||| || ||
Sbjct 165 TCTTGAATTAGACGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTA 224
Query 66955 TCGATCTTCCCTGCTTTGAGTGCGGCCTCGTACTTCTTCTTCACGAAGTCATACGTGAAG 67014
|| | ||| ||||| || | || ||| || | || || | ||| | |||
Sbjct 225 TCCACCTTACCTGCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAA 284
Query 67015 CGGTCAGGCCATGCACCCCTGAAGTCCTTCTCCGAGCAAGGGAACTTCTCGCACACAGGG 67074
|| |||||||| ||||| || ||||| ||||| ||||| || || | |||||||||
Sbjct 285 CGATCAGGCCACGCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGG 344
Query 67075 TAGACGTTCACCTTCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTA 67134
|| ||||| || ||| ||||| ||||| ||||||||||| | ||||| | ||||
Sbjct 345 TACACGTTAACTGCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTA 404
Query 67135 AACGGTGTACCTGACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCC 67194
|| || |||||||||||||| | | | ||| |||||| | |||||| || | |||
Sbjct 405 AAGGGAGTACCTGACCAGATTACCTTAGAGCGTATTGGGTCTAATGCGTAGTCAATAGCC 464
Query 67195 TTGTATACCGTGTCTTCGATAGACGCGATCACAGTAGGCGAGCGAGCATCTTCGTCCGAA 67254
||||| || || ||||| | || | || || |||| || | |||||||| |||||
Sbjct 465 TTGTACACTGTATCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGAT 524
Query 67255 ACCAGGTCATCGAGAACCGCAAGTTGCGGACGCTTACCCATCTCCTTCGCACCACGGACA 67314
| | |||||| || || ||||| ||||| ||||||||| || |||||||| |||
Sbjct 525 ATTAAGTCATCTAGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACA 584
Query 67315 CCGGTCTTGGCACCGTAGCCTTTGACGATGAAGATGTTCCCTTCAACGTTGACGAACTTC 67374
|||||||| || || || ||||| ||||| || ||| || |||| ||| || | |
Sbjct 585 CCGGTCTTTGCGCCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCC 644
Query 67375 CACCGGATATCGGTGAACTCTGTACCGCCACCAGGAGGCAGGAACTGCTGCAAGAAAGCA 67434
|| || ||||| |||||| || | ||| | ||| | || || |
Sbjct 645 CAGCGTATATCAGTGAACCTAGT----------GTAGGTACATACTTAAGTAAAAATTCT 694
Query 67435 CTGTTCTCCCAGCGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTGTCGATGGAG 67494
||| ||||| ||| ||||||||||||| ||||||||||| || ||||| || ||
Sbjct 695 GAGTTTTCCCAACGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTA 754
Query 67495 TCGGATACATACAGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCGTA 67547
|| || ||||||||||| | | || || || || || || | ||||||||
Sbjct 755 TCTGAAACATACAGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTA 807
>seq488807
Length=774
Score = 192 bits (212), Expect = 3e-44
Identities = 223/298 (75%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 66909 GTCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCTGC 66968
|||||| || ||||| |||| ||||||| |||||||| || | || | ||| |||||
Sbjct 297 GTCTTCTTCTGACATAATTCTTAGCATCAACTCTTGGTTAAAAGAATCCACCTTACCTGC 238
Query 66969 TTTGAGTGCGGCCTCGTACTTCTTCTTCACGAAGTCATACGTGAAGCGGTCAGGCCATGC 67028
||| | || ||| | |||| | || |||||||||||||||| ||||||||||
Sbjct 237 TTTAACAGCTTTGGTGTATTGCTTCATTACATAGTCATACGTGAAGCGATCAGGCCATGA 178
Query 67029 ACCCCTGAAGTCCTTCTC-CGAGCAAGGGAACTTCTCGCACACAGGGTAGACGTTCACCT 67087
|| |||| || ||||| || ||||| || ||||| ||||||||||| || || || |
Sbjct 177 GCCTTTGAACTC-TTCTCTCGTACAAGGAAATTTCTCACACACAGGGTACACATTTACGT 119
Query 67088 TCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTAAACGGTGTACCTG 67147
||| || || ||||| ||||||||||||| || || |||||||||||| |||||||
Sbjct 118 ACCAAGCTCCTGACTCAACTGCTTTGTACAATGGGTCACGGGCGTTAAACGGAGTACCTG 59
Query 67148 ACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCCTTGTATACCGT 67205
||||||| || | ||| || |||| |||||||||||| || || || || ||
Sbjct 58 ACCAGATTATTTTAGACTTGGTAGGATGCAATGCGTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 165 bits (182), Expect = 4e-36
Identities = 542/833 (65%), Gaps = 17/833 (2%)
Strand=Plus/Plus
Query 66910 TCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCT--- 66966
|| ||||| ||||| ||| | ||||| || ||||| | ||| | | | | |||
Sbjct 2156 TCCTCATCAGACATAATTTGTAGCATAAGCTCTTGATAGAAACCATTCACCATACCTTGA 2215
Query 66967 GCTTTGAGTGCGGCCTCGTACTT--CTTCTTCACGAAGTCATACGTGAAGCGGTCAGGCC 67024
||| ||||| | | |||| | ||||| || ||||||| ||||| || ||
Sbjct 2216 GCT---AGTGCCTCTTGGTACATAGCTTCTACAT--AGTCATAATCAAAGCGATCCTCCC 2270
Query 67025 ATGCACCCCTGAAGTCCTTCTCC-GAGCAAGGGAACTTCTCGCACACAGGGTAGACGTTC 67083
|||| || | || || ||||| | ||||| |||||||| || | ||| || || |
Sbjct 2271 ATGCTCCTTTAAACTC-TTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACACTT 2329
Query 67084 ACCTTCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTAAACGGTGTA 67143
|| | ||| ||||| || |||| |||| |||| |||||| || || ||||| || |||
Sbjct 2330 ACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAGTA 2389
Query 67144 CCTGACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCCTTGTATACC 67203
|| ||| || || | | ||||| ||||| || | | |||| |||
Sbjct 2390 CCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTACT 2449
Query 67204 GTGTCTTCGATAGACGCGATCACAGTAGGCGAGCGAGCATCTTCGTCCGAAACCAGGTCA 67263
||||||| |||| || || ||||| || || | || || | ||| | ||||
Sbjct 2450 GTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGTCA 2509
Query 67264 TCGAGAACCGCAAGTTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCGGTCTTG 67323
|| || | || | || || || |||||||||||||| ||||||| | ||| ||||||
Sbjct 2510 TCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCTTG 2569
Query 67324 GCACCGTAGCCTTTGACGATGAAGATGTTCCCTTCAACGTTGACGAACTTCCACCGGATA 67383
||||| || || || || | ||| | | || | || || |||| ||||| |||
Sbjct 2570 GCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAATA 2629
Query 67384 TCGGTGAACTCTGTACCGCCACCAGGAGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCC 67443
|| |||| || | || | ||| || ||| ||| ||||| |||| |||||
Sbjct 2630 TCTGTGAGCT---TTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCC 2686
Query 67444 CAGCGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTGTCGATGGAGTCGGATACA 67503
|| || |||| |||||||| | ||| ||| | ||||| || || || ||||||
Sbjct 2687 CAACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACA 2746
Query 67504 TACAGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCGTAGACC-CCGAGGTACAG 67562
||||| | | | ||||| || || || | ||||| ||| | || || |
Sbjct 2747 TACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAA 2806
Query 67563 GAACAGGTATTCCCCCATCAGAGTGGTCTTGGCTGCACCACGGAAAACCATGTTGGCAAT 67622
|| ||||| || |||| || || ||||| |||||||||| || | |||||| || |
Sbjct 2807 GATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGCTAC 2866
Query 67623 CCGTCGTTCACCACTACCCACCTGGTCCAGCATCCGGTAGTGCAACACCGGAGTCTTGTT 67682
|| | |||| | | | || || | |||| |||| | || || | |||
Sbjct 2867 GTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGTT 2926
Query 67683 CTCCTCGCCTTGTCCGCCGTTCACCAACTTGATGAACTGCACGAACT-CAATG 67734
|||||| || | || || || || | ||| || ||| || ||||| |||||
Sbjct 2927 CTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAAGAACTCCAATG 2979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238024134901764
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