Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_013691.1 Length=74901 Score E Sequences producing significant alignments: (Bits) Value seq486019 298 3e-76 seq488807 192 3e-44 seq255804 165 4e-36 >seq486019 Length=823 Score = 298 bits (330), Expect = 3e-76 Identities = 457/653 (70%), Gaps = 10/653 (2%) Strand=Plus/Plus Query 66895 TCCTGAATCAGACGGTCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTG 66954 || ||||| ||||| || || || ||||||||||| | ||| || |||||||| || || Sbjct 165 TCTTGAATTAGACGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTA 224 Query 66955 TCGATCTTCCCTGCTTTGAGTGCGGCCTCGTACTTCTTCTTCACGAAGTCATACGTGAAG 67014 || | ||| ||||| || | || ||| || | || || | ||| | ||| Sbjct 225 TCCACCTTACCTGCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAA 284 Query 67015 CGGTCAGGCCATGCACCCCTGAAGTCCTTCTCCGAGCAAGGGAACTTCTCGCACACAGGG 67074 || |||||||| ||||| || ||||| ||||| ||||| || || | ||||||||| Sbjct 285 CGATCAGGCCACGCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGG 344 Query 67075 TAGACGTTCACCTTCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTA 67134 || ||||| || ||| ||||| ||||| ||||||||||| | ||||| | |||| Sbjct 345 TACACGTTAACTGCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTA 404 Query 67135 AACGGTGTACCTGACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCC 67194 || || |||||||||||||| | | | ||| |||||| | |||||| || | ||| Sbjct 405 AAGGGAGTACCTGACCAGATTACCTTAGAGCGTATTGGGTCTAATGCGTAGTCAATAGCC 464 Query 67195 TTGTATACCGTGTCTTCGATAGACGCGATCACAGTAGGCGAGCGAGCATCTTCGTCCGAA 67254 ||||| || || ||||| | || | || || |||| || | |||||||| ||||| Sbjct 465 TTGTACACTGTATCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGAT 524 Query 67255 ACCAGGTCATCGAGAACCGCAAGTTGCGGACGCTTACCCATCTCCTTCGCACCACGGACA 67314 | | |||||| || || ||||| ||||| ||||||||| || |||||||| ||| Sbjct 525 ATTAAGTCATCTAGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACA 584 Query 67315 CCGGTCTTGGCACCGTAGCCTTTGACGATGAAGATGTTCCCTTCAACGTTGACGAACTTC 67374 |||||||| || || || ||||| ||||| || ||| || |||| ||| || | | Sbjct 585 CCGGTCTTTGCGCCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCC 644 Query 67375 CACCGGATATCGGTGAACTCTGTACCGCCACCAGGAGGCAGGAACTGCTGCAAGAAAGCA 67434 || || ||||| |||||| || | ||| | ||| | || || | Sbjct 645 CAGCGTATATCAGTGAACCTAGT----------GTAGGTACATACTTAAGTAAAAATTCT 694 Query 67435 CTGTTCTCCCAGCGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTGTCGATGGAG 67494 ||| ||||| ||| ||||||||||||| ||||||||||| || ||||| || || Sbjct 695 GAGTTTTCCCAACGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTA 754 Query 67495 TCGGATACATACAGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCGTA 67547 || || ||||||||||| | | || || || || || || | |||||||| Sbjct 755 TCTGAAACATACAGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTA 807 >seq488807 Length=774 Score = 192 bits (212), Expect = 3e-44 Identities = 223/298 (75%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 66909 GTCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCTGC 66968 |||||| || ||||| |||| ||||||| |||||||| || | || | ||| ||||| Sbjct 297 GTCTTCTTCTGACATAATTCTTAGCATCAACTCTTGGTTAAAAGAATCCACCTTACCTGC 238 Query 66969 TTTGAGTGCGGCCTCGTACTTCTTCTTCACGAAGTCATACGTGAAGCGGTCAGGCCATGC 67028 ||| | || ||| | |||| | || |||||||||||||||| |||||||||| Sbjct 237 TTTAACAGCTTTGGTGTATTGCTTCATTACATAGTCATACGTGAAGCGATCAGGCCATGA 178 Query 67029 ACCCCTGAAGTCCTTCTC-CGAGCAAGGGAACTTCTCGCACACAGGGTAGACGTTCACCT 67087 || |||| || ||||| || ||||| || ||||| ||||||||||| || || || | Sbjct 177 GCCTTTGAACTC-TTCTCTCGTACAAGGAAATTTCTCACACACAGGGTACACATTTACGT 119 Query 67088 TCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTAAACGGTGTACCTG 67147 ||| || || ||||| ||||||||||||| || || |||||||||||| ||||||| Sbjct 118 ACCAAGCTCCTGACTCAACTGCTTTGTACAATGGGTCACGGGCGTTAAACGGAGTACCTG 59 Query 67148 ACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCCTTGTATACCGT 67205 ||||||| || | ||| || |||| |||||||||||| || || || || || Sbjct 58 ACCAGATTATTTTAGACTTGGTAGGATGCAATGCGTAATCCACTGCTTTATAAACTGT 1 >seq255804 Length=3791 Score = 165 bits (182), Expect = 4e-36 Identities = 542/833 (65%), Gaps = 17/833 (2%) Strand=Plus/Plus Query 66910 TCTTCATCCGACATGATTCGCAGCATCAGTTCTTGGTTGAACGTGTCGATCTTCCCT--- 66966 || ||||| ||||| ||| | ||||| || ||||| | ||| | | | | ||| Sbjct 2156 TCCTCATCAGACATAATTTGTAGCATAAGCTCTTGATAGAAACCATTCACCATACCTTGA 2215 Query 66967 GCTTTGAGTGCGGCCTCGTACTT--CTTCTTCACGAAGTCATACGTGAAGCGGTCAGGCC 67024 ||| ||||| | | |||| | ||||| || ||||||| ||||| || || Sbjct 2216 GCT---AGTGCCTCTTGGTACATAGCTTCTACAT--AGTCATAATCAAAGCGATCCTCCC 2270 Query 67025 ATGCACCCCTGAAGTCCTTCTCC-GAGCAAGGGAACTTCTCGCACACAGGGTAGACGTTC 67083 |||| || | || || ||||| | ||||| |||||||| || | ||| || || | Sbjct 2271 ATGCTCCTTTAAACTC-TTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACACTT 2329 Query 67084 ACCTTCCAGGCACCGGACTCCACTGCTTTGTACAGAGGATCCTTGGCGTTAAACGGTGTA 67143 || | ||| ||||| || |||| |||| |||| |||||| || || ||||| || ||| Sbjct 2330 ACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAGTA 2389 Query 67144 CCTGACCAGATGATCATGTTGCGGGTTGGGTGCAGTGCGTAATCCACCGCCTTGTATACC 67203 || ||| || || | | ||||| ||||| || | | |||| ||| Sbjct 2390 CCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTACT 2449 Query 67204 GTGTCTTCGATAGACGCGATCACAGTAGGCGAGCGAGCATCTTCGTCCGAAACCAGGTCA 67263 ||||||| |||| || || ||||| || || | || || | ||| | |||| Sbjct 2450 GTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGTCA 2509 Query 67264 TCGAGAACCGCAAGTTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCGGTCTTG 67323 || || | || | || || || |||||||||||||| ||||||| | ||| |||||| Sbjct 2510 TCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCTTG 2569 Query 67324 GCACCGTAGCCTTTGACGATGAAGATGTTCCCTTCAACGTTGACGAACTTCCACCGGATA 67383 ||||| || || || || | ||| | | || | || || |||| ||||| ||| Sbjct 2570 GCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAATA 2629 Query 67384 TCGGTGAACTCTGTACCGCCACCAGGAGGCAGGAACTGCTGCAAGAAAGCACTGTTCTCC 67443 || |||| || | || | ||| || ||| ||| ||||| |||| ||||| Sbjct 2630 TCTGTGAGCT---TTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCC 2686 Query 67444 CAGCGGTACTCCAAGTTCTTCCGCATGTTCTTGACCCCGTTGTCGATGGAGTCGGATACA 67503 || || |||| |||||||| | ||| ||| | ||||| || || || |||||| Sbjct 2687 CAACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACA 2746 Query 67504 TACAGAGCAAGGTCTACCTTCCCGAAACCAGGAAGATCACCGTAGACC-CCGAGGTACAG 67562 ||||| | | | ||||| || || || | ||||| ||| | || || | Sbjct 2747 TACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAA 2806 Query 67563 GAACAGGTATTCCCCCATCAGAGTGGTCTTGGCTGCACCACGGAAAACCATGTTGGCAAT 67622 || ||||| || |||| || || ||||| |||||||||| || | |||||| || | Sbjct 2807 GATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGCTAC 2866 Query 67623 CCGTCGTTCACCACTACCCACCTGGTCCAGCATCCGGTAGTGCAACACCGGAGTCTTGTT 67682 || | |||| | | | || || | |||| |||| | || || | ||| Sbjct 2867 GTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGTT 2926 Query 67683 CTCCTCGCCTTGTCCGCCGTTCACCAACTTGATGAACTGCACGAACT-CAATG 67734 |||||| || | || || || || | ||| || ||| || ||||| ||||| Sbjct 2927 CTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAAGAACTCCAATG 2979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238024134901764