Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014036.1
Length=174436
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 221 1e-52
seq506238 141 1e-28
seq508109 123 3e-23
seq522862 107 2e-18
seq434791 91.5 2e-13
seq494957 89.7 6e-13
seq353462 82.4 8e-11
seq128994 82.4 8e-11
>seq449735
Length=3187
Score = 221 bits (244), Expect = 1e-52
Identities = 424/621 (68%), Gaps = 12/621 (2%)
Strand=Plus/Plus
Query 41085 AAACTGTCTCTACCGACTCCAATTATGGCGGGTGTACGTACTCCTACGCGCCAGTTCTCC 41144
||| | || ||||| || ||||||||||| ||||| ||||| || || |||||||| |
Sbjct 25 AAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGC 84
Query 41145 AGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGGTTCTCTTAACGCTGTAACCTCTGCG 41204
|||||| |||| || | || || |||| ||| ||||||| | |||||
Sbjct 85 TCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCA 144
Query 41205 ATCGTGAAGTATATTTCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCA 41264
|| || || || | || |||||||| || ||||| ||||||| || | ||||| |||
Sbjct 145 ATTGTTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCA 204
Query 41265 ATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTTTCTGGAAA 41324
||||| | || || ||| ||||| ||||| ||| |||||||| | ||
Sbjct 205 CTGGGTAGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAG 264
Query 41325 CATATCCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAACA 41384
|| | ||||| || |||||| |||||| || || || || ||||| || || |||||
Sbjct 265 CACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAACC 324
Query 41385 CTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAAA 41444
||| || || | |||||| | ||||| |||||||| | || | || || |||
Sbjct 325 TTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGC 384
Query 41445 GGCGTAGAAGAAAACCGCGTTCGTCATCTTGATTACGGTGTACAGCTTAACCAGTTGATG 41504
|| || || || |||||||| |||||| | |||||||| |||||| |||| | | |||
Sbjct 385 GGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATG 444
Query 41505 TATAAACGCTTAATGAATCGTGATTACATTACGCTGTTTAGTC---CGGATGTTGCTAAC 41561
|| || ||||| || || |||||||| ||||||| | | |||| ||| |
Sbjct 445 TACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATG-TGCCA-- 501
Query 41562 GATCGTCTGTATGATCTGTTCTATGAAGCTGATCAGACTGCATTTGAAGAACTGTATGAA 41621
| || || ||| || | ||||| | |||| | ||||| | || |||| |
Sbjct 502 ---GGCCTTTACGATGCATTTTTTGAAGACCA--AGAC-GAGTTTGACGCGCTTTATGTA 555
Query 41622 AGCCTGGAAAAAGACCCAACTGTTCGTAAGAAACGCATCAAAGCGGTTGACCTGTTCCAA 41681
| ||| ||||| | | ||||||| |||||||| ||||| |||| |||||| |
Sbjct 556 AAATACGAACAAGACGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCTCA 615
Query 41682 CTTTTAGCACAGGAACGCGCA 41702
| || || || ||||| |||
Sbjct 616 ATGTTTGCGCAAGAACGTGCA 636
Score = 87.8 bits (96), Expect = 2e-12
Identities = 193/283 (68%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 42874 TTTTCGAAAGCCTGACGCAAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATC 42933
|||| |||| || | |||| || ||||| || || ||||| || |||||||| ||
Sbjct 1872 TTTTTGAAAAACTAATTGAAAAGCAGCTTTCGTTTTTTTGGCGCCCAGAAGAAGTAGACG 1931
Query 42934 TGTCTACTGACCGTATGCAGTATGCAAAACTTCCTGAACATGAAAAA-ATC-ATTTTCGA 42991
| | ||||| | | | | | | | ||||| |||||||| || ||||| |
Sbjct 1932 TAAGCAAAGACCGCTTAGACTTTCAAGCATTACCTGATCATGAAAAGCATATATTTTTAA 1991
Query 42992 TTCTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGC 43051
| ||| || | |||||||| || | |||| | | || || ||| || ||| | ||
Sbjct 1992 GT--AACTTAAAATATCAAACATTGCTTGATAGCGTACAAGGGCGTTCACCAAACGTGGC 2049
Query 43052 ATTTTTGCCAATTGCATC-CGATGTGAGCATGGAAACCTGGATCGAAACGTGGGCGTTTA 43110
| | || |||| ||| | | ||| | ||||| ||||| ||||||||||||||||
Sbjct 2050 CCTACTACCTATTGTATCGCTACCAGAGT-TAGAAACATGGATAGAAACGTGGGCGTTTA 2108
Query 43111 GTGAAACCATCCACAGCCGTAGTTACACGCATATTCAACGTAA 43153
||||||| || || ||||| |||||||||||| |||||
Sbjct 2109 GTGAAACGATTCATAGCCGCTCGTACACGCATATTATTCGTAA 2151
>seq506238
Length=275
Score = 141 bits (156), Expect = 1e-28
Identities = 135/173 (78%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 51221 GAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCGGTT 51280
|||||||| || ||||||||||| || ||||| || || ||||| | ||||| |||
Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162
Query 51281 GAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGTGCGTTTT 51340
|||| ||||||||||| ||||| ||||| || ||||| || ||||| ||||||||||||
Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102
Query 51341 AACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCCGAACCTTTACAGA 51393
|||||| | || || ||||| || | ||||| | | || || ||||||||
Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGA 49
>seq508109
Length=334
Score = 123 bits (136), Expect = 3e-23
Identities = 143/191 (75%), Gaps = 4/191 (2%)
Strand=Plus/Minus
Query 90689 CATGAAATGAAGGTTGATTTGCTGTTGTCCGGCTTCTGCAAGATTAGC--CACTGAATTA 90746
||| || || ||||||||||||| ||| || || | | | | || ||||| | |
Sbjct 189 CATAAAGTGTAGGTTGATTTGCTTTTGACCAGCAGCGGTTAAACGCGCAACACTG--TCA 132
Query 90747 AACGCTACATCGAATCCAGCATGTTTGTATACTGATACCGCAACAGCCCCAGCAACAGCC 90806
||||||||||| || ||||| ||||| || |||||||| |||| ||| |||||||| |
Sbjct 131 AACGCTACATCAAAACCAGCGTGTTTATAAACTGATACAGCAATAGCACCAGCAACTGAT 72
Query 90807 GCTAAACGCGCTGCAACGTCTTTTGATACATCAGCAATGGTAAGGTTTGGTACAATGCCT 90866
||||| || ||||| |||| ||| ||||||||||| || || ||||| | ||| |||
Sbjct 71 GCTAATTTAGCAGCAACTTCTTCTGACACATCAGCAATTGTTAGATTTGGGATAATACCT 12
Query 90867 TTAGAACGCGC 90877
| ||||| ||
Sbjct 11 TGTGAACGAGC 1
>seq522862
Length=256
Score = 107 bits (118), Expect = 2e-18
Identities = 177/253 (70%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 42993 TCTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGCA 43052
|| ||||| | |||||||| || ||||| | || ||||| ||| | |||||| | |||
Sbjct 2 TCAAACCTGAAATATCAAACACTATTAGACTCGATACAGGGTCGTAGTCCTAACATGGCA 61
Query 43053 TTTTTGCCAATTGCATCCG-ATGTGAGCATGGAAACCTGGATCGAAACGTGGGCGTTTAG 43111
|| | || || | |||| | |||| | || || ||||||||||| ||| | || ||
Sbjct 62 TTACTTCCGATCGTATCCTTACCTGAGT-TAGAGACATGGATCGAAACCTGGTCCTTCAG 120
Query 43112 TGAAACCATCCACAGCCGTAGTTACACGCATATTCAACGTAACTTACACATCGATCCTTC 43171
||| || |||||||||| || ||||| ||||||| |||||| || | || || ||
Sbjct 121 TGAGACTATCCACAGCCAGAGCTACACACATATTCTTCGTAACATATTCGATGACCCGTC 180
Query 43172 TGTACAGTTCGACCAAATCCTTCGCAATGAAGCGATTATGAAACGTTCCGCATCAATGAC 43231
|| | | | || | || | |||||| | ||| |||||| | ||| |||| |
Sbjct 181 TGAAGTGCTAGATGATATTGTCAGCAATGTTGAGATACAGAAACGAGCTGCACCAATCGC 240
Query 43232 ACGGTATTATGAT 43244
| | |||||||||
Sbjct 241 AAGCTATTATGAT 253
>seq434791
Length=745
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 40080 TTTCAGTTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGAT 40139
||||||||| |||| | ||||||||| ||| ||||||||||||| |||
Sbjct 555 TTTCAGTTCTTTGTGGCGGATAATAAACTGTCATGCCAGCTCTATCAGCGTTCAGCAGAT 614
Query 40140 GTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATATTATCGCT 40199
| ||| |||| ||||||| || || ||| |||||| || || || ||||| ||||
Sbjct 615 TTATTCCTAGGTGTGCCGTTTAACATTGCCAGCTATGCCCTACTTACCCATATGGTCGCG 674
Query 40200 GATATTTGCGGGTACGAAGTGGGCGATCTGGTTTGGACTGGTGGTGATGTCCATATCTAT 40259
| ||||| || |||||||| || | | ||||| ||||||||| ||| || |||
Sbjct 675 CAAATTTGTGGTCTAGAAGTGGGGGAATTCATCTGGACAGGTGGTGATTGCCACATTTAT 734
Query 40260 AAAAA 40264
||||
Sbjct 735 CAAAA 739
>seq494957
Length=669
Score = 89.7 bits (98), Expect = 6e-13
Identities = 79/96 (82%), Gaps = 2/96 (2%)
Strand=Plus/Minus
Query 49383 ACAGTTCTAAAAAATATTGGCCCCTTAGCTCAATAGG-TAGAGCTAATCACTCATAATGG 49441
|||||| || |||| |||||||||||||||| | || |||||| | ||||||||| |
Sbjct 164 ACAGTTATACAAAAAGTTGGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCG 105
Query 49442 TTAGGTTCCCGGTTCAAGTCACGGGAGGGGCCACCA 49477
|||||| ||| |||| |||| ||||||||||||||
Sbjct 104 TTAGGTCCCCAGTTCGAGTC-TGGGAGGGGCCACCA 70
>seq353462
Length=332
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/224 (70%), Gaps = 12/224 (5%)
Strand=Plus/Minus
Query 42892 AAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATCTGTCTACTGACCGTATGC 42951
|||| ||||| || ||||| |||||||| |||||||||||| | || ||| ||||||
Sbjct 222 AAAAGCAACTGTCGTTCTTTTGGCGTCCAGAAGAAGTCGATGTATCACGTGATCGTATGG 163
Query 42952 AGTAT-GCAAAACTTCCTGAACATGAA---AAAATCATTTTCGATTCTAACCTACAGTAT 43007
| ||| |||| |||| ||| ||| | ||| || || ||||||| |||||
Sbjct 162 ATTATGGCAATTTGTCCT-CACACGAACAGCATATCTTTATC---AGTAACCTAAAGTAT 107
Query 43008 CAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGCATTTTTGCCAATTGCA 43067
||||| || | || | || || || ||| | || ||| | | | |||||| | | |
Sbjct 106 CAAACGCTACTCGACTCTATCCAAGGTCGTAGCCCAAACGTGGTGCTATTGCCATTGGTA 47
Query 43068 TCCGAT--GTGAGCATGGAAACCTGGATCGAAACGTGGGCGTTT 43109
| |||| ||||| | || || ||||| || |||||| |||||
Sbjct 46 T-CGATTCCTGAGC-TTGAGACATGGATTGAGACGTGGACGTTT 5
>seq128994
Length=861
Score = 82.4 bits (90), Expect = 8e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 42966 CCTGAACATGAAAAAATCATTTTCGATTCTAACCTACAGTATCAAACCCTGTTAGATACC 43025
|||||||||||| || |||||| || || | |||| |||||| ||||||| |
Sbjct 856 CCTGAACATGAACAACATATTTTCTTCTCAAATTTGAAGTACCAAACCTTGTTAGACTCA 797
Query 43026 ATTCAGGGACGTGGGCCTAACCTCGCATTTTTGCCAATTGCATC-CGATGTGAGCATGGA 43084
||||| || || || || | ||||||||||| | | ||| | | ||| ||||
Sbjct 796 ATTCAAGGCCGCTCACCGAATGTGGCATTTTTGCCTTTGGTATCGCTACCTGA-ATTGGA 738
Query 43085 AACCTGGATCGAAACGTGGGCGTTTAGTGAAACCATCCACAGCCGTAGTTACACGCATAT 43144
||| ||||| ||||| ||| ||||| ||||||||| ||| ||| ||||| || ||
Sbjct 737 AACGTGGATTGAAACATGGTCGTTTTCTGAAACCATTCACTCGCGTTCGTACACTCACAT 678
Query 43145 TCAACGTAA 43153
| |||||
Sbjct 677 TATTCGTAA 669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554401382128320
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