Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014260.1
Length=172253
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 176 5e-39
seq509673 127 2e-24
seq128994 86.0 7e-12
>seq449735
Length=3187
Score = 176 bits (194), Expect = 5e-39
Identities = 424/632 (67%), Gaps = 11/632 (2%)
Strand=Plus/Minus
Query 144696 TAAATTCGTGCAGTGCCTGAACGTTCAGTCATGAACAATTCGAAGAGGTCACGTGCCTTA 144755
||||| || | || | || |||||| | |||| | ||| || ||| || |||
Sbjct 653 TAAATACGACCGGTACTTGCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTA 594
Query 144756 ATACGTTTCTTACGAATACTAGGGTCTTTTTCTGCAGCTTCATACAATTCACGG-AAACG 144814
|| ||||| |||||||| ||||| ||| | | || | | || | || ||||
Sbjct 593 ATGCGTTTTTTACGAATTGATTCGTCTTGTTC-GTATTTT-ACATAAAGCGCGTCAAACT 536
Query 144815 -GTCTTGGTCTTCGAAATAAGAATGGTAAAGCTCACCGCTCATTTCATGAGGACTAAACA 144873
|||||||||||| ||| | | || |||||| | || ||| || || |||||||
Sbjct 535 CGTCTTGGTCTTCAAAAAATGCATCGTAAAGGCCTG-GCACAT--CAGAGGGGCTAAACA 479
Query 144874 GAGTAATGTAATCATTCTTACCGAAACGTTCCATCATCAGGTCATTCAACTGGATTCCGT 144933
|||||||| || | ||| ||||| ||| || | ||| ||||| | ||||
Sbjct 478 AGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGT 419
Query 144934 AGTCCATATGTCGAATACGGTTTTCATCAACGCCCTTGTTATTTTTCAGAACGAGCAGAT 144993
| || | ||| || | ||||| |||||||| || ||||||||| || || | ||| |
Sbjct 418 AATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGT 359
Query 144994 TTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCC 145051
|||| ||||| |||||||||| || || | ||| || || ||||||||||| | ||
Sbjct 358 TTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACC 301
Query 145052 ACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGT 145111
||||| ||||| |||||| || || || || || || | || |||||| ||| ||
Sbjct 300 GCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGT 241
Query 145112 ATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGAT 145171
||| | |||| || ||| ||| | ||| |||||||| ||| |||| ||
Sbjct 240 ATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAAT 181
Query 145172 ACCAATACCTGCACGTTTAGAAATGTATTCAATTATCGAGTTAGCAGTTTTGTTAATAGA 145231
||||| || ||||||| || | ||||| || || | | || |||||| ||
Sbjct 180 GCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGA 121
Query 145232 TTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGGCGAGTCGGTGTACG 145291
| || |||||| || || | ||||| || ||||| ||||| || || |||||
Sbjct 120 ATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACG 61
Query 145292 CGCTCCAGCCATAATAGGGGTAGGCAACGAAA 145323
| || |||||||| || ||||| | ||||
Sbjct 60 AACACCTGCCATAATTGGCGTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 144917 ATTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCCCTTGTTATT 144976
||| ||||| | ||||| |||||||| || | |||||| || || ||||| ||||||
Sbjct 221 ATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATT 280
Query 144977 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 145036
|||||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 281 TTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGC 340
Query 145037 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 145096
|||||||||| || |||||||| || ||||||||||||| ||||| |||| ||||
Sbjct 341 ACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAA 400
Query 145097 TGGAATAACACCGGTATG 145114
||| ||| ||| |||||
Sbjct 401 TGGGATACAACCCGTATG 418
>seq128994
Length=861
Score = 86.0 bits (94), Expect = 7e-12
Identities = 209/311 (67%), Gaps = 13/311 (4%)
Strand=Plus/Plus
Query 142728 ACCGTCTTTGAACAGGTGAGTGGCCCATTCTTTTTCTTG----GCGGTTAACTTCCATGA 142783
||| |||||||| | || ||||||||||||||||||| || | ||| | ||
Sbjct 170 ACCATCTTTGAATAAGTACTTGGCCCATTCTTTTTCTTGTTCCGCCG----CTTTGACGA 225
Query 142784 AAATATCAACTGCTTCTTGTTCGCACTCTTGAGCAATTTTAACCCATTCGTCGCCATCAG 142843
| | ||| |||||||| | ||||| |||||||| || ||| | | ||
Sbjct 226 ATAAGTCATACGCTTCTTGCTTACACTCAGCAGCAATTTCTCCCATTTCTGGGTCGTCTT 285
Query 142844 TACCAAGTTGAAGCTGACGAATAATGTACTGGGTGCCTTTAAGGTGGAGCTGTTCATCAC 142903
||||| || | | || | ||||| || || | || ||||| | ||||||||
Sbjct 286 TACCACCCTGCATCAGAGCTAAAATGTGTTGTGTACTATTGAGGTGTAAGGCTTCATCAC 345
Query 142904 GTGCAATGAACTTCATAATCTTAGCATTACCTTCCATGATTTCCATGTTCTTATGGAAGT 142963
| ||||| || ||||| ||||||||||||||||| | | | |||| | |||
Sbjct 346 GGGCAATTAAGCGAATAATTTTAGCATTACCTTCCAT-AACACGACGTTC--AGCAAAGG 402
Query 142964 TAAAGGTACATGCGAAAGATACATAAAAACGAATAGCTTCTAGGGCGTTGA-TTACATGC 143022
||| | ||| || ||| ||||| || ||||| ||||||| ||| |||| | |||| |
Sbjct 403 CAAACGAACAGGCAAAACTGACATAGAAGCGAATCGCTTCTAAGGCATTGACTGACAT-C 461
Query 143023 AGGCAAAGATA 143033
| ||| | |||
Sbjct 462 ATGCACAAATA 472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547461668962960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |