Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 237 2e-57
seq506238 150 2e-31
seq509673 132 5e-26
seq508109 127 2e-24
seq351952 105 8e-18
seq522862 95.1 1e-14
seq128994 95.1 1e-14
seq450559 86.0 7e-12
>seq449735
Length=3187
Score = 237 bits (262), Expect = 2e-57
Identities = 435/633 (69%), Gaps = 12/633 (2%)
Strand=Plus/Plus
Query 41133 TAAACTGTCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTC 41192
|||| | ||| |||||||||| |||||||| ||||| ||||| || || || |||||
Sbjct 24 TAAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAG 83
Query 41193 CAGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCCGC 41252
| ||||| |||| || | ||| || || | ||| | ||||| |||| ||
Sbjct 84 CTCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGC 143
Query 41253 GATCGTGAAATATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCGCGC 41312
|| || ||||| | || |||||||| || || || | ||||| || | |||||| ||
Sbjct 144 AATTGTTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGC 203
Query 41313 TATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAA 41372
||||| | || || ||| ||||| |||||| || ||| || || | ||
Sbjct 204 ACTGGGTAGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAA 263
Query 41373 ACACATTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAAC 41432
||| |||| || ||||||||| ||||| || || || || ||||| || ||||||||
Sbjct 264 GCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAAC 323
Query 41433 CCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCG 41492
| ||| || ||| | |||||| | ||||| ||||||||| | || || |||||||||||
Sbjct 324 CTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCG 383
Query 41493 TGGCGTTGAAGAAAACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAACGATTTGAT 41552
|| ||||| || ||||| | ||||| | || || ||||||||| |||| | | ||
Sbjct 384 CGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAAT 443
Query 41553 GTATAAGCGTTTAATCAATAACGATTACATCACTCTGTTCAGCC---CTGACGTTGCGAA 41609
||| ||||||||| || |||| ||||| || |||| |||| |||| | ||| |
Sbjct 444 GTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATG-TGCCA- 501
Query 41610 TGATCGCCTCTATGACGCGTTCTATCAAGCGGATCAGACTGAGTTTGAAGAACTCTATAC 41669
|||| || || || || | | ||| | |||| |||||||| | || |||
Sbjct 502 ----GGCCTTTACGATGCATTTTTTGAAGACCA--AGAC-GAGTTTGACGCGCTTTATGT 554
Query 41670 CAGTCTGGAAAAAGACCCAGCGGTACGCAAGAAACGTATTAAAGCGGTAGATCTGTTCCA 41729
| ||| ||||| | | | || || ||||| |||||||| | || ||||||
Sbjct 555 AAAATACGAACAAGACGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCTC 614
Query 41730 GTTGCTTGTTCAGGAACGCGCACAGACCGGACG 41762
|| ||| || ||||| ||| ||||| ||
Sbjct 615 AATGTTTGCGCAAGAACGTGCAAGTACCGGTCG 647
>seq506238
Length=275
Score = 150 bits (166), Expect = 2e-31
Identities = 137/173 (79%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 51307 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51366
|||||||| ||||| |||||||| || ||||| || || ||||| |||||||||||||
Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162
Query 51367 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51426
|| || || |||||||| ||||| ||||| || ||||| || || || |||||||||||
Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102
Query 51427 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGA 51479
|| ||| | || || |||||||||| ||||| | | || || ||||||||
Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGA 49
>seq509673
Length=441
Score = 132 bits (146), Expect = 5e-26
Identities = 161/218 (74%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 41326 ATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACG 41385
|| ||||| || ||||| ||||| || |||||| |||| |||| | || ||
Sbjct 439 ATTCGTGGCGGCGAAGCGCAGCATACGGGTTGTATCCCATTCTATAAACTGTTCCAAACT 380
Query 41386 GCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41445
|| ||||||| || || || || ||||| ||||| |||||||| || ||| ||| ||
Sbjct 379 GCTGTTAAATGCTGCTCACAAGGCGGCGTCCGTGGCGGTGCAGCGACGTTGTTTTACCCA 320
Query 41446 ATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41505
| |||||| | |||||||| | |||| |||||||||||||| ||||| |||||
Sbjct 319 TTATGGCATTTAGAAGTTGAGTCATTATTGGTACTGAAAAATAACCGCGGCGTGGAAGAC 260
Query 41506 AACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAA 41543
|||||| | ||||| |||| || ||||||||| ||||
Sbjct 259 AACCGTGTCCGTCATATGGATTACGGCGTACAG-TTAA 223
>seq508109
Length=334
Score = 127 bits (140), Expect = 2e-24
Identities = 211/305 (69%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 90860 CCGCGTCCCTTTTGTTTCAGCCCCAGGAACACAATCGCATTGACTTGTTTCAGTCGCGGA 90919
||||| |||||||| |||| | ||||||||| ||||| || | | ||| ||
Sbjct 305 CCGCGACCCTTTTGCTTCAATGATAAGAACACAATAGCATTTACATTAGCTAATCGTGGG 246
Query 90920 TCATTGCGCACAGCATCAACAACGTTAAACGCATCATCATAGGTTTTAGAGCTAACCATG 90979
||| | || ||| ||| || || ||||||| ||| || | || | |||
Sbjct 245 TCAGTTTTCATAGCTTCAGTTACAGTATACGCATCTTCAATAGTACGACCACTGATCATA 186
Query 90980 AAGTGAAGGTTAATTTGCTGTTGTCCTGCTTCTGCCAGGTTCGCTACCGAGTCGAAAGCG 91039
||||| ||||| ||||||| ||| || || | | | ||| || ||| || ||
Sbjct 185 AAGTGTAGGTTGATTTGCTTTTGACCAGCAGCGGTTAAACGCGCAACACTGTCAAACGCT 126
Query 91040 ACATCGAAGCCAGCATGTTTATAAACCGATACCGCAACAGCCCCAGCAACAGCCGCTAAA 91099
||||| || ||||| ||||||||||| ||||| |||| ||| |||||||| | |||||
Sbjct 125 ACATCAAAACCAGCGTGTTTATAAACTGATACAGCAATAGCACCAGCAACTGATGCTAAT 66
Query 91100 CGCGCTGCAACGTCTTTTGATACATCGGCAATGGTAAGGTTCGGCACAATGCCTTTAGAA 91159
|| ||||| |||| ||| ||||| ||||| || || || || | ||| |||| |||
Sbjct 65 TTAGCAGCAACTTCTTCTGACACATCAGCAATTGTTAGATTTGGGATAATACCTTGTGAA 6
Query 91160 CGCGC 91164
|| ||
Sbjct 5 CGAGC 1
>seq351952
Length=416
Score = 105 bits (116), Expect = 8e-18
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 51307 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51366
|||||||| |||||||||||||| || || || ||| |||| | ||||| ||
Sbjct 203 GAAGGTGGTCAACACTTAAACGTTAATGTAATGAACCGTGAAATGTTATTGGATGCAATG 144
Query 51367 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51426
| ||||||| || || ||||| ||||| || ||||| || || || ||||| || ||
Sbjct 143 GAAAATCCAGATAAGTATCCACAATTAACAATTCGTGTATCGGGTTACGCAGTACGATTT 84
Query 51427 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTA 51486
|| || | ||| | |||||| ||| || || ||| | || |||||||||| || |||
Sbjct 83 AACTCGTTAACTGCAGAACAAAAGCAAGATGTAATCACACGTACCTTTACAGCGACGCTA 24
Query 51487 TAA 51489
|||
Sbjct 23 TAA 21
>seq522862
Length=256
Score = 95.1 bits (104), Expect = 1e-14
Identities = 176/256 (69%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 43522 TCGAACCTGCAATATCAAACCCTGTTGGATACCATTCAGGGGCGCGGCCCTAACCTGGCT 43581
|| |||||| |||||||||| || || || | || ||||| || | |||||| ||||
Sbjct 2 TCAAACCTGAAATATCAAACACTATTAGACTCGATACAGGGTCGTAGTCCTAACATGGCA 61
Query 43582 TTCCTCCCTATCGCTTCCGATGTCTC-GATGGAAACGTGGATCGAAACATGGGCGTTCAG 43640
|| || || |||| ||| | || | | || || ||||||||||| ||| | |||||
Sbjct 62 TTACTTCCGATCGTATCCT-TACCTGAGTTAGAGACATGGATCGAAACCTGGTCCTTCAG 120
Query 43641 TGAAACAATCCATAGCCGCAGTTATACGCACATTCAGCGCAACCTACACATCGACCCGTC 43700
||| || ||||| |||| || || || || |||| || ||| || | ||||||||
Sbjct 121 TGAGACTATCCACAGCCAGAGCTACACACATATTCTTCGTAACATATTCGATGACCCGTC 180
Query 43701 AAAAGAGTTCGATAAAATTCTGCGCAACGAAGCGATCATGAAACGTTCGGCTTCCATGAC 43760
||| | | ||| | ||| | |||| | | ||| |||||| | || | || |
Sbjct 181 TGAAGTGCTAGATGATATTGTCAGCAATGTTGAGATACAGAAACGAGCTGCACCAATCGC 240
Query 43761 AAAATACTACGATGAC 43776
|| || || ||||||
Sbjct 241 AAGCTATTATGATGAC 256
>seq128994
Length=861
Score = 95.1 bits (104), Expect = 1e-14
Identities = 181/265 (68%), Gaps = 4/265 (2%)
Strand=Plus/Minus
Query 43933 GTCAACGCTCTGGAAGCGATCCGCTTCTACGTGTCGTTTACCTTCACGTTCAACTTTGCC 43992
||||| || | |||||||| |||||||| || ||| ||| |||| ||||||
Sbjct 454 GTCAATGCCTTAGAAGCGATTCGCTTCTATGTCAGTTTTGCCTGTTCGTTTGCCTTTGCT 395
Query 43993 GAACAAGGTAAGATGGAAGGTAACGCGAAGATCATGCGTCTGATTGCCCGTGATGAAGCA 44052
|||| || ||||||||||| || || || || || | |||||||||||||||||
Sbjct 394 GAACGTCGTGTTATGGAAGGTAATGCTAAAATTATTCGCTTAATTGCCCGTGATGAAGCC 335
Query 44053 CTTCATCAGAAAGGTACTCAAAGCAAGATCCGACTCTG--GCAAATGGGTAAAGACGACC 44110
| || | || |||| ||| || | ||||| ||| |||||||||||||
Sbjct 334 TTACACCTCAATAGTACACAA--CACATTTTAGCTCTGATGCAGGGTGGTAAAGACGACC 277
Query 44111 CAGAAATGGCAGAAATCGCATTCCAGTATGAAGAGGAAGCGACACAGATTTTCCTTGAAG 44170
||||||||| |||||| || ||| | | | |||||| | | ||| | |||
Sbjct 276 CAGAAATGGGAGAAATTGCTGCTGAGTGTAAGCAAGAAGCGTATGACTTATTCGTCAAAG 217
Query 44171 TATACGAACAGGAAAAAGAATGGGC 44195
||||| ||||||||||||||
Sbjct 216 CGGCGGAACAAGAAAAAGAATGGGC 192
>seq450559
Length=633
Score = 86.0 bits (94), Expect = 7e-12
Identities = 75/91 (82%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 155251 ACCGAAAAAGA-TGTATTCGATGCGTTCCAGTCCTATGAGTATGAAGTGAATACCCTGCA 155309
||||||||||| ||| | || || |||||||| ||| ||||||||||||||| ||||
Sbjct 296 ACCGAAAAAGAGTGTCAT-GACGCATTCCAGTCACTTGAATATGAAGTGAATACCTTGCA 354
Query 155310 TACTGCCAACGGGCAAACCCCGTTTGTTACC 155340
||| || || || ||||| ||||||||||||
Sbjct 355 TACCGCTAATGGCCAAACACCGTTTGTTACC 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561878342900160
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