Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 174 2e-38
seq475275 170 3e-37
seq450559 125 1e-23
seq250551 116 5e-21
seq507286 114 2e-20
seq511551 102 1e-16
seq509355 100 4e-16
seq516580 86.0 9e-12
seq128994 86.0 9e-12
>seq449735
Length=3187
Score = 174 bits (192), Expect = 2e-38
Identities = 315/457 (69%), Gaps = 4/457 (1%)
Strand=Plus/Minus
Query 129013 GGACTGAACAAGGTAATATAGTCGTCGTTTTTCAACCGTTCTAACATCAGCTTATTGATT 129072
|| || ||||||||||| |||||||| || | || || |||| || ||||| |
Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429
Query 129073 TGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGTTATTCTTGAGC 129132
|| | ||||| || | ||| || | ||||| || ||||| || |||||| || ||
Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369
Query 129133 ACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGCACCGCCG 129192
|| | | ||||| ||||| | ||||| | ||||| | | ||||| || |||||
Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309
Query 129193 CGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAATGGGATA 129252
|| ||||| || || |||||||| || ||||| || || |||| || |||| || |||
Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATA 249
Query 129253 ATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCTCGGCACGAATCGCACCG 129312
||| ||||| | |||| || | |||||| | ||| |||||||| |||
Sbjct 248 CAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCT 189
Query 129313 CCGTTGATGCCGATACCAGCGCGTTTGCTGATA--TAGTCAACGATAGAACTAGCGGTAG 129370
|||| ||||| || || || || |||| |||| || | ||| || | | | ||| |
Sbjct 188 GCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGAGGTGG 131
Query 129371 CGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAACTGCCGAG 129430
|||| || ||| || ||| ||||| || || ||||| ||||||||||| || |
Sbjct 130 CGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTG 71
Query 129431 TCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAG 129467
| || || ||||||||||| | ||| || || || ||
Sbjct 70 TTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAG 34
Score = 127 bits (140), Expect = 3e-24
Identities = 192/270 (71%), Gaps = 10/270 (4%)
Strand=Plus/Minus
Query 126933 GCCCATTCTTTTTCTTGTTCGGCAGCGTCCAGAAAAATCTGAACAGCCTTTGACTCAAGA 126992
||||||||||||||||| || |||||||||| ||| || | || || || | | | |
Sbjct 2628 GCCCATTCTTTTTCTTGCTCTGCAGCGTCCACAAACATTTTAATTGC-TTCGTCGCGGCA 2570
Query 126993 C-GTTTAGCAATATCAACCATTTCTGGGTCATCTTCGCCGTTTTGCCAAGTGCGAATTTG 127051
| | |||| | |||||||||| || |||| |||| |||| | | ||||
Sbjct 2569 CTGCGCGGCAACAATCGCCATTTCTGGATCGTCTTTACCGTCTTGCATAAT----ATTTA 2514
Query 127052 ATA----CTGGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCT 127107
| | ||| ||||| | || | |||||| || ||||| || || || || |
Sbjct 2513 AAATATGCTGAGTGCCAGATAAATGTAGCGCTTCATCGCGGGCAATAAGCTTGATTATTT 2454
Query 127108 TAGCGTTGCCTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACAT 127167
||||||| ||||||||||| | || || ||||||| || | |||||| ||||| ||||
Sbjct 2453 TAGCGTTACCTTCCATCAATTCACGCTCAGCAAACGCAAACGAGCAGGCAAAGCTGACAT 2394
Query 127168 AAAAACGAATCGCTTCCAAAGCGTTTACCG 127197
|||||||||||||||| ||| |||||||
Sbjct 2393 AAAAACGAATCGCTTCTAAAATATTTACCG 2364
>seq475275
Length=1050
Score = 170 bits (188), Expect = 3e-37
Identities = 247/348 (71%), Gaps = 3/348 (1%)
Strand=Plus/Plus
Query 124646 TTCGTCAATGCGATTAATTGTGTTGCCACCATAAATGTGACTTGCAACCTGTGCAATGAT 124705
|||||| || || ||||| ||| | ||||||||||| ||||| || ||||| ||||| ||
Sbjct 1 TTCGTCGATACGGTTAATCGTGGTACCACCATAAATATGACTCGCGACCTGAGCAATAAT 60
Query 124706 TTGAGCAGTAACAGCCGCAGCGGTAGCGATGCTCTTAGGAGTTTCGATCTGTGCATTACC 124765
||| || |||||||| | ||| || | || |||||| | ||| || | ||||||||
Sbjct 61 TTGCGCCGTAACAGCAGTAGCAGTTGAAATAGACTTAGGCGGTTCTATTTCAGCATTACC 120
Query 124766 CATGCGGAACCCACGCTCTAACATGCCGTTGAGATCAATCAACATGCAGTTAAACATTGG 124825
||| || ||| | || ||||||| | |||||| |||||||| |||||||| ||
Sbjct 121 CATTTTAAAACCATGAGTTAGCATGCCGGCCAAATCAATTAACATGCAATTAAACATCGG 180
Query 124826 GAAGAACGGAGAGTAATCAAGATCATGGAAGTGAATAAAACCAGCTTCGTG---TGCTTG 124882
||| || || | ||||| | || || ||||||| || ||| || |||
Sbjct 181 GAAAAAAGGTGCATAATCTAAGTCGTGATAGTGAATTTCGCCTTTTTCATGGGCGGCTAC 240
Query 124883 CAGAACTTCGGTCGGCAGATAGTGCTTTGCAAAGTGCTTGCTTACTATGCCCGCGACTAA 124942
|| | ||| | | | | || | || ||| | ||||| || || ||||| | |||
Sbjct 241 CACATCTTTTGGCAGTAAATGGGTTTTGGCATAATGCTTAGCCACAATACCCGCTAATAA 300
Query 124943 ATCGCGTTGTGTCGGAATAACTTTTGCATCTTTGTTTGCATTCTCATT 124990
||| || || |||||||| ||||| |||||||| || ||||| |||||
Sbjct 301 ATCACGCTGGGTCGGAATGACTTTGGCATCTTTATTGGCATTTTCATT 348
>seq450559
Length=633
Score = 125 bits (138), Expect = 1e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 124645 CTTCGTCAATGCGATTAATTGTGTTGCCACCATAAATGTGACTTGCAACCTGTGCAATGA 124704
||||||| || || ||||| ||| | ||||||||||| || || || ||||| ||||| |
Sbjct 200 CTTCGTCGATACGGTTAATCGTGGTACCACCATAAATATGGCTCGCTACCTGAGCAATAA 141
Query 124705 TTTGAGCAGTAACAGCCGCAGCGGTAGCGATGCTCTTAGGAGTTTCGATCTGTGCATTAC 124764
|||| || |||||||| | || || | || |||||| | ||| || | |||||||
Sbjct 140 TTTGCGCCGTAACAGCAGTGGCAGTTGATATAGACTTAGGCGGTTCTATTTCAGCATTAC 81
Query 124765 CCATGCGGAACCCACGCTCTAACATGCCGTTGAGATCAATCAACATGCAGTTAAACATTG 124824
|||| || ||| | |||||||||| | |||||| | ||||||||||||||| |
Sbjct 80 CCATTTTAAAACCATGAGTTAACATGCCGGCCAAATCAATTAGCATGCAGTTAAACATCG 21
Query 124825 GGAAGAA 124831
|||| ||
Sbjct 20 GGAAAAA 14
>seq250551
Length=853
Score = 116 bits (128), Expect = 5e-21
Identities = 285/423 (67%), Gaps = 8/423 (2%)
Strand=Plus/Minus
Query 123214 ATTACATATGTTTGACACGACGCTGGACTTCGTCCTGTTTG-CCGACGTTAAATGCGCGA 123272
|||| | ||| || || | |||| ||||| | || || |||| |||||||| ||
Sbjct 814 ATTATAAATGCTTCACTCTGCGCTTAACTTCTTGTTGCTTAACCGAAGTTAAATGGTCGC 755
Query 123273 GATCCAGGGTTACCCAAATACCCACAGA-CGCGACGAATAACGTTCA-TCTTACGGTCAT 123330
| | ||| | || ||||| || || | |||||||| |||| || || | | |
Sbjct 754 GCATCTGGGCTGCCTAAATAACCGCACAACGCGACGAGTAACAGACACTCGGCTTGGC-T 696
Query 123331 CGTGATTGCCACACTTCGGACATTCGTATCCTTTAGAAGTAGCGGTAAACTCACCGTTAA 123390
| ||||| ||||| || || || | | || ||| ||| |||||||||| |||
Sbjct 695 CATGATTACCACATTTAGGGCACACAAACCCCTTACTGGTACAATTAAACTCACCAATAA 636
Query 123391 ATCCACATTCAAAACAAACATCAACTGGAGTGTTTGTTCCATAGTACGGAGTGTTCCGAT 123450
| || || || |||| |||||| ||||| || || || || || || | ||
Sbjct 635 AACCGCAATCGTAACACTCATCAATGGGAGTATTGGTGCCGTAATATGGCACTCGGCTAT 576
Query 123451 AAGCATAATCCCAAACTGCTTCGAGTGCTTCCAGATTGTGTTTCATATTCGGATATTCAC 123510
|| ||||||||||| |||||| ||||| | |||||| | ||| || |||||||| |
Sbjct 575 AACTGTAATCCCAAACGTTTTCGAGCGCTTCAATATTGTGCTGCATGTTGGGATATTCGC 516
Query 123511 CGTATGAAATGAAACCACCGGT-ACTA-AGCGGAATGAATTGCTTTTCAAAATCGATCTT 123568
|||| |||| || || || | | | || | || | | | ||||||||| |||||
Sbjct 515 CGTAACAAATAAACCCGCCATTGGCGATGGCTGGAT--AAGGTTGTTCAAAATCAATCTT 458
Query 123569 GTCATACGGATTTGTGTTCATATCCACAGACAGATGGAAGCTGTTTGTGTAATAGTCTTT 123628
||| | |||||| ||| | || ||| | |||||||| || ||||||||| ||||
Sbjct 457 ATCAAAAGGATTTACTTTCTTTTCAACATCTAAGTGGAAGCTATTGGTGTAATAGCCTTT 398
Query 123629 ATC 123631
||
Sbjct 397 GTC 395
>seq507286
Length=366
Score = 114 bits (126), Expect = 2e-20
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 124785 AACATGCCGTTGAGATCAATCAACATGCAGTTAAACATTGGGAAGAACGGAGAGTAATCA 124844
|||||||| | |||||||| ||| ||||||||||| ||||| ||||| || |||||
Sbjct 9 AACATGCCAGCCAAATCAATCAGCATACAGTTAAACATAGGGAAAAACGGCGAATAATCT 68
Query 124845 AGATCATGGAAGTGAATAAAACCAGCTTCGTGTGCTTGCAGAACTTCGGTCGGCAGATAG 124904
| || ||| |||| || ||| ||||| || || | || || | |||| |
Sbjct 69 AAGTCGTGGTAGTGGATCTCACCCGCTTCATGGGCAGCAACCACATCCTTTGGCAAAATA 128
Query 124905 TG-CTTT--GCAAAGTGCTTGCTTACTATGCCCGCGACTAAATCGCGTTGTGTCGGAATA 124961
|| |||| ||| | || || ||||||||||||| |||||| || || ||||| ||
Sbjct 129 TGACTTTTGGCATAATGTTTTGCCACTATGCCCGCGAGTAAATCCCGCTGAGTCGGGATC 188
Query 124962 ACTTTTGCATCTTTGTTTGCATTCTCATT 124990
||||| | |||||| || |||||||||||
Sbjct 189 ACTTTCGAATCTTTATTGGCATTCTCATT 217
>seq511551
Length=634
Score = 102 bits (112), Expect = 1e-16
Identities = 299/458 (65%), Gaps = 12/458 (3%)
Strand=Plus/Minus
Query 124083 AGTGCGATACGCGGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCTTCATGAACT 124142
||||| | ||| || | ||| | | || ||||| | ||||| | || ||| |||
Sbjct 501 AGTGCAACACGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATCAAACACT 442
Query 124143 TCATTACCGGTTTCGTCTTCCCAGCGATGCAAGAAA-CTACGGCATCCCATAGGGAACTT 124201
|| ||||| | ||||| | | | |||| || || | ||| ||||| |||
Sbjct 441 TCCTTACCAGAAGAGTCTTTATA-CTCTCCAAGGAAGCTCCTGCAGCCCATGCTTGCCTT 383
Query 124202 AAAGCTACCAGTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTT 124261
||| | |||||| || ||||| | ||||| || | | || || || |||||||||||
Sbjct 382 AAAACCACCAGTAACCTCTACAATCTTATCGTAGTTGATAATATCAGGGTACATACGCTT 323
Query 124262 GGCAGCGCACTCCAGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTT 124321
|| ||||| || || | |||||| ||| ||| || || |||| |||||
Sbjct 322 ACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTCCTGTTTAAAGTT 263
Query 124322 GTGTCCGTCTTTCAGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTG-- 124379
| |||||||| | | | | ||| || ||||| || | || | ||||||
Sbjct 262 GACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAATACCGCTGT-----CCTCTTTGAT 208
Query 124380 ---CCAAGACCTTTCATCCGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAG 124436
|| | ||||| || || || | || || | || |||||| || | || |||||
Sbjct 207 GCACCTAAGCCTTTAATACGCACCTCAAGGATGGATTTCTGAATTAGCTTAGACTCCCAA 148
Query 124437 CTAGTGCCTAGTCCAAACCCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGA 124496
| ||| |||| ||||| || | || || || || |||| |||||||| | ||| |
Sbjct 147 CAAGTACCTAAACCAAAACCTACCGTACAAAAGGGGCTTTGTCCATTTGCTGTGTGTAAG 88
Query 124497 GTGTTTACCTCATACTCTAGGCTTTGCATTGCATCATA 124534
||||| | || ||||| || ||||| | ||||||||
Sbjct 87 GTGTTAATTTCGTACTCAAGACTTTGGAAAGCATCATA 50
>seq509355
Length=474
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 193689 GCGGGAGGTGGATTTGAACCACCGACCTTTAGCTTATGAGGCTAACGAGATT-CCAGACT 193747
||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||||||
Sbjct 362 GCGGGAGCTGGATTTGAACCAGCGACCTTTAGCTTATGAGGCTAACGAGCTTACCAGACT 303
Query 193748 TCTCCATCCCGC 193759
||| |||||||
Sbjct 302 GCTCTATCCCGC 291
>seq516580
Length=413
Score = 86.0 bits (94), Expect = 9e-12
Identities = 152/221 (69%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 124074 TTTGCGTCGAGTGCGATACGCGGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCT 124133
||||| | ||| || | ||| || ||||| | | |||||||| | || || | ||
Sbjct 75 TTTGCTTTGAGCGCTAAACGAGGTAAGTTGATTGATACAACACCCAAGTTATTACGTCCA 134
Query 124134 TCATGAACTTCATTACCGGTTTC---GTCTTCCCAGCGATGCAAGAAACTACGGCATCCC 124190
|||| ||| | ||| ||| | |||| ||| || | ||| ||| || |||
Sbjct 135 TCATATACTGGTTCACCTGTTACTGGGTCTGACCATTCGTGTAGGAATGAACGACAGCCC 194
Query 124191 ATAGGGAACTTAAAGCTACCAGTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGA 124250
|| ||| |||| || | |||||| ||| || | || || || |||| || ||||||
Sbjct 195 ATTGGGTACTTGAACCCACCAGTAGTTTCAACTAACTTGTCGTAGTTCAAAATATCTGGA 254
Query 124251 TACATACGCTTGGCAGCGCACTCCAGTGCCATCTGTTTGAT 124291
||||||||||||| ||| || || | ||| | |||||||||
Sbjct 255 TACATACGCTTGGTAGCACATTCAACTGCTAACTGTTTGAT 295
>seq128994
Length=861
Score = 86.0 bits (94), Expect = 9e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 126998 AGCAATATCAACCATTTCTGGGTCATCTTCGCCGTTTTGCCA-AGTGCGAATTTGATACT 127056
|||||| || ||||||||||||| |||| || ||| || || || || | |
Sbjct 257 AGCAATTTCTCCCATTTCTGGGTCGTCTTTACCACCCTGCATCAGAGCTAAAATG-TGTT 315
Query 127057 GGGTGCCTTTGAGGTGCAATTGTTCATCACGCGCAATCAGTTTCATGATCTTAGCGTTGC 127116
| || | |||||||| || ||||||||| ||||| | || || ||||| || |
Sbjct 316 GTGTACTATTGAGGTGTAAGGCTTCATCACGGGCAATTAAGCGAATAATTTTAGCATTAC 375
Query 127117 CTTCCATCAAACCGCGTTCGGCAAACGAGAAGGTGCAGGCGAAGCTTACATAAAAACGAA 127176
||||||| | || ||||| ||||| | || | ||||| || || ||||| || ||||
Sbjct 376 CTTCCATAACACGACGTTCAGCAAAGGCAAACGAACAGGCAAAACTGACATAGAAGCGAA 435
Query 127177 TCGCTTCCAAAGCGTTTAC 127195
||||||| || || || ||
Sbjct 436 TCGCTTCTAAGGCATTGAC 454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715995289421760
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