Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq79730 197 1e-44
seq439426 150 1e-30
seq340775 134 1e-25
seq300954 113 3e-19
seq413528 107 1e-17
seq280032 107 1e-17
seq509470 98.7 7e-15
seq137853 96.9 3e-14
seq525344 86.0 5e-11
>seq79730
Length=2051
Score = 197 bits (218), Expect = 1e-44
Identities = 935/1469 (64%), Gaps = 16/1469 (1%)
Strand=Plus/Plus
Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308
||| || |||| | || || ||||| || |||||||| | || || || || || |
Sbjct 531 TTTGTCGACGGCGGATACGTTCAGAATGCCGTTGGCATCAATGTCGAAAGTTACCTCCAC 590
Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368
|| || || |||| ||||||| ||||| || | | | ||| | ||||| ||
Sbjct 591 CTGTGGTACACCTCGGGGAGCAGGAGGGATGCCGGCAAGCTCAAACTTGCCCAGGAGGTT 650
Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428
|| || || || | || || ||||| | | || || || ||| || ||
Sbjct 651 GTTGTCCTTGGTCATGGCTCTCTCGCCCTCATACACCTGAATTAGCACACCAGGCTGGTT 710
Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487
||| | || || | || | ||||| ||| || | || || || ||||| | | |
Sbjct 711 ATCAGCGTAGGTGGAGAAGA-TCTGGGTTTGCTTGCTGGGGATAGTGGTGTTGCGTTTGA 769
Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547
| | ||||| | ||||| | || || | ||| ||||| || |||| || || |
Sbjct 770 TTAGCGGCGTCATGACTCCACCAACAGTCTCAATACCCAGAGACAGGGGAGCCACGTCCA 829
Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607
|| | | || ||| | || || ||| | || | || || || || || | |
Sbjct 830 GCAGCAGCAGATCTTGGACGTTCTCTGAAGTGTCTCCCATGAGGATGGCAGCCTGGACTG 889
Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667
| |||||||| || || |||||||| || || | | | | || |||| | | ||||| |
Sbjct 890 CTGCACCATAAGCCACTGCTTCATCTGGGTTGATACTCTTGTTCAGTTCTCTGCCATTAA 949
Query 517668 AAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726
| |||| ||| ||||| || | | || ||||| | | || || ||||| | ||
Sbjct 950 AGAAATCTTGCAAGAACTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACG 1008
Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786
|||||||| | | || ||||||| || ||||| || |||| || || || ||
Sbjct 1009 ATTTCATGGATCATGGACTTATCCATCTTGGAATCTTTTAGGGCTTTCTCCACTGGCTCC 1068
Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846
|| | || || | ||||| || || || || || || || || ||
Sbjct 1069 AGTGTTCCCCTGAAGAGCTCTGAGTTGAGCTCCTCAAAGCGTGCCCTTGT--GATGGAGG 1126
Query 517847 T-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904
| || || || || || || |||| ||| || | |||||| | | || || || |
Sbjct 1127 TGTAGAAGTCGATGCCCTCAAACAGAGAGTCGATTTCAATGCTGGCCTGGGTGCTTGAGG 1186
Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT 517964
| || | | || || | |||||| || || | ||||| | | ||| | || |||
Sbjct 1187 ACAGGGTCCTCTTCGCTCTTTCACAAGCGGTGCGCAGTCTCCTAACTGCTCT--CTTATT 1244
Query 517965 --GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACG 518022
| | | ||| | || | ||||| || || || |||| | | || | ||
Sbjct 1245 TTGGCTGATGTCTTTCTTGTGCTTTCTTTTAAATTCCTCAAGGAAGTGACTGACCATCCG 1304
Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082
||| ||||| || || || || | | || | ||||| || ||| |||| | || |
Sbjct 1305 ATTGTCAAAGTCCTCTCCACCAAGGTGTGTGTCTCCTGCAGTGGCTTTTACCTCAAAGAT 1364
Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142
||||| |||| | || | | || || ||| || ||||| | |||||| || ||
Sbjct 1365 GCCATCCTCAATGGTCAGGATGGACACGTCGAAGGTGCCTCCACCGAGATCAAAGATGAG 1424
Query 518143 TACATTCATTTCTTTGTCTTGGTT-TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
|| || ||| |||| | |||||| | || || |||| || || || || |
Sbjct 1425 CACGTTGCGCTCTCC-TCTTTTTCCTTTATCCAAGCCGTAGGCAATCGCTGCTGCTGTGG 1483
Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261
| || || || || |||| |||||| ||||||| || ||| ||||| ||||||||||
Sbjct 1484 GCTCGTTGATGATCCTCAGAACATTCAGACCAGAGATCACTCCAGCATCCTTAGTGGCTT 1543
Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321
| || || ||||| || ||||| || || || || || || |||| | || | || |
Sbjct 1544 GCCTCTGAGAATCATTGAAATAAGCTGGCACTGTGATGACTGCATTTGAGACCTTTTGTC 1603
Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381
| | || || || | | ||||||||| || | |||||| || |||| || |
Sbjct 1604 CCAGGTAGGCCTCGGCTATCTCCTTCATTTTAACCAAGACCATTGACGAGATTTCCTC-G 1662
Query 518382 GGGAATATTGCTT-GGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 518440
||| | | |||| || |||| || ||| || | || | || || | ||
Sbjct 1663 GGGTAGAAGGCTTTGGTTTCACCTTTATACTCCACCTGAACTTTGGGCTTTCCGTTATCA 1722
Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500
| || || || || ||||| |||||| || || || || | ||||||||| | |
Sbjct 1723 TCGATCACCTTGAAAGGCCAAAGTTTCATGTCGGACTGGACGATGGAGTCATTAAACTTT 1782
Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560
|| || |||| ||| || || ||||| || |||||||| || || || || | || |
Sbjct 1783 CTTCCGATTAGTCGCTTGGCGTCAAATATTGTATTGGTGGGGTTCATGGCGACCTGGTTC 1842
Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620
||||| ||||||||||| || ||||| || |||| | ||||| ||||||||
Sbjct 1843 TTGGCAGCATCTCCAATGAGCCTCTCTGTGTCGCTAAAGGCCACATAGCTGGGAGTTGTC 1902
Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680
| || || || || || || || || || ||||| |||| ||| | || | || |||
Sbjct 1903 CTGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGTTGGAAAACTGCCACGCAA 1962
Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAAT 518709
| | || ||||| ||||| || |||||
Sbjct 1963 GAATAGGTGGTTCCCAAATCTATGCCAAT 1991
>seq439426
Length=530
Score = 150 bits (166), Expect = 1e-30
Identities = 131/163 (80%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219
|||| || ||||| | ||| || |||| || |||||||||||||| || ||||| | |
Sbjct 182 CTTGCTTCTTATCGATACCGTAAGCAAGTGCTGCAGCAGTTGGTTCGTTGATAATACGCT 241
Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279
||||| |||||| ||||| | || |||||||| || ||||| | ||||||||||||||
Sbjct 242 TAACATCAAGACCTGCAATACGACCAGCATCTTTCGTTGCTTGACGTTGTGAATCGTTAA 301
Query 518280 AATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACC 518322
| || |||||||| |||||||| || ||||| ||||||| |||
Sbjct 302 AGTAAGCAGGAACGGTAATAACCGCTTCAGTCACTTCTTCACC 344
>seq340775
Length=450
Score = 134 bits (148), Expect = 1e-25
Identities = 140/182 (77%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 518173 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 518232
|| |||||| || | || || || |||||||| || ||||| | | ||||| ||||||
Sbjct 44 AATACCATAAGCTAGTGCCGCTGCCGTTGGTTCGTTGATAATACGCTTAACATCAAGACC 103
Query 518233 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292
||||| | || ||||||||||| ||||| | |||||||||||||| ||||| |||||
Sbjct 104 CGCAATACGACCAGCATCTTTAGTAGCTTGACGCTGTGAATCGTTAAAGTATGCCGGAAC 163
Query 518293 AGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATT 518350
||||||||| || ||||| || ||| ||| || || ||| ||||||| ||||||
Sbjct 164 AGTAATAACTGCTTCAGTAACAGCTTCACC--TAAAAAGTCTTCAGCCGTTTTCTTCATT 221
Query 518351 TT 518352
||
Sbjct 222 TT 223
Score = 87.8 bits (96), Expect = 1e-11
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302
||| || || || || ||||| |||||||| || || || |||||| | ||||||
Sbjct 47 ACCATAAGCTAGTGCCGCTGCCGTTGGTTCGTTGATAATACGCTTAACATCAAGACCCGC 106
Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362
||| | ||| ||| ||| ||||| | ||||| || ||||| ||||| || |||||
Sbjct 107 AATACGACCAGCATCTTTAGTAGCTTGACGCTGTGAATCGTTAAAGTATGCCGGAACAGT 166
Query 322363 AATAACTGCTTTATTAATAGGTT 322385
||||||||||| | ||| || ||
Sbjct 167 AATAACTGCTTCAGTAACAGCTT 189
>seq300954
Length=1016
Score = 113 bits (124), Expect = 3e-19
Identities = 147/202 (73%), Gaps = 11/202 (5%)
Strand=Plus/Minus
Query 518154 CTTTGTC---TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210
||||||| || ||||| || | || || |||| |||||||| |||||||| || |
Sbjct 838 CTTTGTCGCCTTTTTTTTTTTCCATGCCGTAAGCAAGGGCAGCAGCCGTTGGTTCGTTGA 779
Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270
|||| || || | ||| || || | || |||||||| || ||||| | ||||
Sbjct 778 TAAT-------ACGTTTA-ACCTGCGATACGACCAGCATCTTTCGTTGCTTGGCGCTGTG 727
Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAG 518330
|||||||||| || ||||| || ||||| || || || || ||||||| ||| | ||||
Sbjct 726 AATCGTTAAAGTAAGCAGGTACGGTAATGACTGCTTCTGTCACTTCTTCACCTAGATAAT 667
Query 518331 CGCTTGCCGTTTGTTTCATTTT 518352
| ||| |||| |||||||||
Sbjct 666 CTTCTGCTGTTTTTTTCATTTT 645
>seq413528
Length=500
Score = 107 bits (118), Expect = 1e-17
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || || ||||| |||| || ||||||||||| || || || || | || |||
Sbjct 89 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCGTTGATGATACGCAGCACA 148
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||||||| ||| ||||||||||||||||| | || || || || |||||
Sbjct 149 TTGAGCCCAGCAATGACTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAATAA 208
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|||||||| || || || ||||
Sbjct 209 GCAGGAACCGTGATGACTGCAT 230
>seq280032
Length=493
Score = 107 bits (118), Expect = 1e-17
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || || ||||| |||| || ||||||||||| || || || || | || |||
Sbjct 410 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCGTTGATGATGCGCAGCACA 351
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||||||| ||| ||||||||||||||||| | || || || || |||||
Sbjct 350 TTGAGCCCAGCAATGACTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAATAA 291
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|||||||| || || || ||||
Sbjct 290 GCAGGAACCGTGATGACTGCAT 269
>seq509470
Length=539
Score = 98.7 bits (108), Expect = 7e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 366970 TTTATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAAT 367029
||||| || || || | |||| ||||| || || | || ||||||||||||||| ||
Sbjct 369 TTTATTAAAGATGAAGTGGAAATCGTAGTTGCGACCGTGGCTTTTGGTATGGGTATTGAT 428
Query 367030 AAACCGGATGTTAGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTAT 367089
||||| |||| | |||| | ||||||| | || ||||||||||| || |||
Sbjct 429 AAACCCAATGTACGTTTTGTGGTGCATTATGAAATACCTAAGAATATTGAGTCATACTAT 488
Query 367090 CAAGAAATTGGTAGAGCAGGTCGTGATGG 367118
||||||| ||| |||||||| || |||||
Sbjct 489 CAAGAAACTGGGAGAGCAGGACGAGATGG 517
>seq137853
Length=2661
Score = 96.9 bits (106), Expect = 3e-14
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| | || ||||| || || || ||| | |||| |||||||||||||||||||||
Sbjct 1244 CAAAGACTGTGTTGGTGGGGTTCATGGCAACCTGATTTTTGGCTGCATCTCCAATCAGCC 1303
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
||||| ||||| || | ||||| || || || | || || || ||||| ||||
Sbjct 1304 TCTCTGTATCTGTGAAGGCCACATAGCTGGGTGTGGTCCTGTTGCCCTGGTCATTGGCAA 1363
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| || ||||| || |||| || | ||||| ||||| | || ||||| | ||| |
Sbjct 1364 TGATCTCAACCTTTCCATGCTGGAACACACCAACACAGGAGTAGGTGGTTCCAAGATCGA 1423
Query 518703 TACCAA 518708
||||||
Sbjct 1424 TACCAA 1429
>seq525344
Length=259
Score = 86.0 bits (94), Expect = 5e-11
Identities = 105/141 (74%), Gaps = 7/141 (5%)
Strand=Plus/Minus
Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTAT---TTTAAGAACATCTAAACC 322299
|||||| |||||||| || || |||||||| || || || ||| | |||| | |||
Sbjct 172 ACCGTAGGCAAGAGCCGCAGCTGTTGGTTCGTTGATGATACGTTTTA---CATCAAGACC 116
Query 322300 CGCAATTTTAGCAGAAT-CAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 322358
|||||||||| | | | | |||||||| | |||| |||||||||||| |||||||
Sbjct 115 CGCAATTTTACCCGCGTACTTTTGTTGCTTGACGTTGTGAGTCATTAAAATAAGCTGGTA 56
Query 322359 CAGTAATAACTGCTTTATTAA 322379
| || | ||| |||| | |||
Sbjct 55 CGGTTACAACCGCTTCAGTAA 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3754745259756412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |