Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014660.1
Length=167716
Score E
Sequences producing significant alignments: (Bits) Value
seq495559 111 2e-19
seq500771 107 2e-18
>seq495559
Length=380
Score = 111 bits (122), Expect = 2e-19
Identities = 228/333 (68%), Gaps = 6/333 (2%)
Strand=Plus/Plus
Query 142497 TACCTCTTTAGGCATATCAAATGACAACTTAACAATTTCTGAATATGTTGCACCATGGAC 142556
||| |||| || |||||||||||| ||| |||||| |||||||| || ||
Sbjct 30 TACTTCTTGTGGATTATCAAATGACATTCTAATAATTTCAGAATATGTATTTGAGTGTAC 89
Query 142557 TGTTTCGTTATCGTTGA--TGCGTAATTCAGCTGCAACAATTTCTGAACATGGGTCATAA 142614
| |||||| | |||| ||| | | ||||| |||||||||||| |||||| | | |
Sbjct 90 TAGTTCGTT-TGTTTGAATTGCTTGCT-CAGCTTCAACAATTTCTGTACATGGTTGAAAC 147
Query 142615 GGAGCAATCAATACAAAAGGAACTTGAGAAGCAACTGAATCCGTTTCCCATTGCCACATG 142674
|| | || ||||||| |||| | ||| |||| ||||| | |||||||||| |||
Sbjct 148 GGTGATATTAATACAAGCGGAAATCTAGATGCAATAGAATCTGCTTCCCATTGCGTCATA 207
Query 142675 ATATTGTAAATCATTGTGTCTGCAACTTTTTTAGGAACACGTTTAAAGTCCGTTAAGCAT 142734
|| | | | ||| | || | | | |||| || |||||| || ||||||
Sbjct 208 ATGGTTTCTAACATCATATCAGACATATCTTTATCGACTGATTTAAAATCACCAAAGCAT 267
Query 142735 TGTGCAAAATCAAAATCTTGTTCGTCCCAATCAAGAGCCTTCATTTCTTTATAAAGGTCC 142794
| || | | | ||| || | ||| |||||| | | |||||||||||||| | |||
Sbjct 268 TTTGAATAGTTAAATTCATCTTCAGACCAATCTAACGATTTCATTTCTTTATATAAATCC 327
Query 142795 CAGATTTTATCGAAACG-TTTGTTGATAGTATC 142826
|| |||||| || | | ||| || ||||||||
Sbjct 328 CAAATTTTA-GGATAGGATTTATTTATAGTATC 359
>seq500771
Length=867
Score = 107 bits (118), Expect = 2e-18
Identities = 193/277 (70%), Gaps = 14/277 (5%)
Strand=Plus/Minus
Query 143555 CCATCCATCAGGCCATTTAGTTTTATGCATCCATGGTGCATTGCCAAACTCTTCGGCAAG 143614
||| || ||||||| ||||||||||||||||||||| ||| ||||||||||| | |
Sbjct 766 CCAGCCTTCAGGCCGTTTAGTTTTATGCATCCATGGCGCAAGTCCAAACTCTTCAGACAT 707
Query 143615 CTCAATAGAAGCTT---CTAAAAGATAGAAATAATGACGTTCCATTACTTTATGAATAAA 143671
| || |||||||| ||||| ||| |||||||| ||| || || ||| |||
Sbjct 706 TTTAAGAGAAGCTTTAACTAAATGAT---AATAATGAGTTTCAGCTAATTCATGCATAGC 650
Query 143672 GTTACGACC---TTCTTGATCATAGAAGTTTTTGTCATTTTTTGCCATCAAGTGTGCCAA 143728
|| | || | | ||||| | ||| | ||| ||||||||| | |||| |||
Sbjct 649 TTTTTGGCCAGTAACGTCATCAT---ACTTTAGTTTATTCTTTGCCATCCAATGTG-CAA 594
Query 143729 GT-CAACAACACCAACCCCAGCGTTCATACGTTGTTTTGCAGTAAACGCCACTTGAGGGA 143787
|| |||| | |||||| || || | | | | |||| ||| | | || || || |
Sbjct 593 GTCCAACGATACCAACACCTGCACTATTTCTACGAGTTGCTGTATATCCAACATGTGGTA 534
Query 143788 ACGGATAATCAGTTTCGTGAATTGCCGTATGAATCAT 143824
| |||||| | ||| |||||||| |||||||||||
Sbjct 533 ATTCATAATCTGCTTCATGAATTGCAGTATGAATCAT 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 533038637065920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |