Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_014660.1 Length=167716 Score E Sequences producing significant alignments: (Bits) Value seq495559 111 2e-19 seq500771 107 2e-18 >seq495559 Length=380 Score = 111 bits (122), Expect = 2e-19 Identities = 228/333 (68%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 142497 TACCTCTTTAGGCATATCAAATGACAACTTAACAATTTCTGAATATGTTGCACCATGGAC 142556 ||| |||| || |||||||||||| ||| |||||| |||||||| || || Sbjct 30 TACTTCTTGTGGATTATCAAATGACATTCTAATAATTTCAGAATATGTATTTGAGTGTAC 89 Query 142557 TGTTTCGTTATCGTTGA--TGCGTAATTCAGCTGCAACAATTTCTGAACATGGGTCATAA 142614 | |||||| | |||| ||| | | ||||| |||||||||||| |||||| | | | Sbjct 90 TAGTTCGTT-TGTTTGAATTGCTTGCT-CAGCTTCAACAATTTCTGTACATGGTTGAAAC 147 Query 142615 GGAGCAATCAATACAAAAGGAACTTGAGAAGCAACTGAATCCGTTTCCCATTGCCACATG 142674 || | || ||||||| |||| | ||| |||| ||||| | |||||||||| ||| Sbjct 148 GGTGATATTAATACAAGCGGAAATCTAGATGCAATAGAATCTGCTTCCCATTGCGTCATA 207 Query 142675 ATATTGTAAATCATTGTGTCTGCAACTTTTTTAGGAACACGTTTAAAGTCCGTTAAGCAT 142734 || | | | ||| | || | | | |||| || |||||| || |||||| Sbjct 208 ATGGTTTCTAACATCATATCAGACATATCTTTATCGACTGATTTAAAATCACCAAAGCAT 267 Query 142735 TGTGCAAAATCAAAATCTTGTTCGTCCCAATCAAGAGCCTTCATTTCTTTATAAAGGTCC 142794 | || | | | ||| || | ||| |||||| | | |||||||||||||| | ||| Sbjct 268 TTTGAATAGTTAAATTCATCTTCAGACCAATCTAACGATTTCATTTCTTTATATAAATCC 327 Query 142795 CAGATTTTATCGAAACG-TTTGTTGATAGTATC 142826 || |||||| || | | ||| || |||||||| Sbjct 328 CAAATTTTA-GGATAGGATTTATTTATAGTATC 359 >seq500771 Length=867 Score = 107 bits (118), Expect = 2e-18 Identities = 193/277 (70%), Gaps = 14/277 (5%) Strand=Plus/Minus Query 143555 CCATCCATCAGGCCATTTAGTTTTATGCATCCATGGTGCATTGCCAAACTCTTCGGCAAG 143614 ||| || ||||||| ||||||||||||||||||||| ||| ||||||||||| | | Sbjct 766 CCAGCCTTCAGGCCGTTTAGTTTTATGCATCCATGGCGCAAGTCCAAACTCTTCAGACAT 707 Query 143615 CTCAATAGAAGCTT---CTAAAAGATAGAAATAATGACGTTCCATTACTTTATGAATAAA 143671 | || |||||||| ||||| ||| |||||||| ||| || || ||| ||| Sbjct 706 TTTAAGAGAAGCTTTAACTAAATGAT---AATAATGAGTTTCAGCTAATTCATGCATAGC 650 Query 143672 GTTACGACC---TTCTTGATCATAGAAGTTTTTGTCATTTTTTGCCATCAAGTGTGCCAA 143728 || | || | | ||||| | ||| | ||| ||||||||| | |||| ||| Sbjct 649 TTTTTGGCCAGTAACGTCATCAT---ACTTTAGTTTATTCTTTGCCATCCAATGTG-CAA 594 Query 143729 GT-CAACAACACCAACCCCAGCGTTCATACGTTGTTTTGCAGTAAACGCCACTTGAGGGA 143787 || |||| | |||||| || || | | | | |||| ||| | | || || || | Sbjct 593 GTCCAACGATACCAACACCTGCACTATTTCTACGAGTTGCTGTATATCCAACATGTGGTA 534 Query 143788 ACGGATAATCAGTTTCGTGAATTGCCGTATGAATCAT 143824 | |||||| | ||| |||||||| ||||||||||| Sbjct 533 ATTCATAATCTGCTTCATGAATTGCAGTATGAATCAT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533038637065920