Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 201 1e-46
seq506238 118 1e-21
>seq449735
Length=3187
Score = 201 bits (222), Expect = 1e-46
Identities = 322/461 (70%), Gaps = 6/461 (1%)
Strand=Plus/Minus
Query 137853 AACAGAGTGATGTAGTCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAACA 137912
|||| || ||||||||||||||||| | ||| |||| || | || | || ||
Sbjct 482 AACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACG 423
Query 137913 CCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAGG 137972
|| ||||| || ||||| | ||||| ||||| || || ||| || |||||||| |
Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363
Query 137973 AGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCACGGACT 138032
||||| || ||||| | ||||| | || ||| |||| || || ||||| ||||| ||
Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303
Query 138033 CCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCCA 138092
|||||||| ||||| ||||| |||||||| | ||| || | ||||||||| ||
Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243
Query 138093 GTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTTA 138152
||||| | |||| || || || | ||| ||||||||| ||||||||||
Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183
Query 138153 ATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCTGATTT---GTTA 138209
||||| || || ||||||| || | ||| | ||||||| ||| || | ||||
Sbjct 182 ATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG---CAGACGAGGTGGCGTTA 126
Query 138210 ATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAGGA 138269
||||| | || || ||| || || | || || || || || || || || ||
Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66
Query 138270 GTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTT 138310
|||||| |||||||||| ||||| || || || ||||||||
Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTTT 25
>seq506238
Length=275
Score = 118 bits (130), Expect = 1e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061
|| || ||||||| | ||||| |||| ||||||| || | || ||||| || ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121
|| ||||| || ||||||||||| | || ||||||||||| || |||| ||| ||||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTC 62171
|| || ||||| | | ||||||||||| | |||||| ||||||||
Sbjct 172 TCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526121176760000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |