Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq449735 201 1e-46 seq506238 118 1e-21 >seq449735 Length=3187 Score = 201 bits (222), Expect = 1e-46 Identities = 322/461 (70%), Gaps = 6/461 (1%) Strand=Plus/Minus Query 137853 AACAGAGTGATGTAGTCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAACA 137912 |||| || ||||||||||||||||| | ||| |||| || | || | || || Sbjct 482 AACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACG 423 Query 137913 CCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAGG 137972 || ||||| || ||||| | ||||| ||||| || || ||| || |||||||| | Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363 Query 137973 AGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCACGGACT 138032 ||||| || ||||| | ||||| | || ||| |||| || || ||||| ||||| || Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303 Query 138033 CCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCCA 138092 |||||||| ||||| ||||| |||||||| | ||| || | ||||||||| || Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243 Query 138093 GTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTTA 138152 ||||| | |||| || || || | ||| ||||||||| |||||||||| Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183 Query 138153 ATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCTGATTT---GTTA 138209 ||||| || || ||||||| || | ||| | ||||||| ||| || | |||| Sbjct 182 ATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG---CAGACGAGGTGGCGTTA 126 Query 138210 ATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAGGA 138269 ||||| | || || ||| || || | || || || || || || || || || Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66 Query 138270 GTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTT 138310 |||||| |||||||||| ||||| || || || |||||||| Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTTT 25 >seq506238 Length=275 Score = 118 bits (130), Expect = 1e-21 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061 || || ||||||| | ||||| |||| ||||||| || | || ||||| || || Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111 Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121 || ||||| || ||||||||||| | || ||||||||||| || |||| ||| |||||| Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171 Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTC 62171 || || ||||| | | ||||||||||| | |||||| |||||||| Sbjct 172 TCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526121176760000