Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 138 1e-27
seq496362 122 1e-22
seq504380 113 6e-20
seq448634 93.3 5e-14
seq478780 84.2 3e-11
>seq44246
Length=4029
Score = 138 bits (152), Expect = 1e-27
Identities = 948/1498 (63%), Gaps = 57/1498 (4%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||| |||| || |||| ||||| | ||||| || | |
Sbjct 349 CCGCAGCACATGCTCATGAGGGTGTCGGTCGGAATCCACAAGACGGATATCGACGCCGCC 408
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || | | || | || ||||| |||||| | || || |||||
Sbjct 409 ATCGAGACCTACAACCTGCTCTCGGAGAAGTG-GTTCACCCACGCCTCCCCCACGCTCTT 467
Query 111731 CAACGCTGGTACACCAA--GACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788
|||||| || || ||| | || || | ||||| || ||||| | | | |||||
Sbjct 468 CAACGCAGGAAC--CAACCGGCCTCAGCTCTCCAGCTGCTTCCTGCTCACCATGAAGGAC 525
Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848
|| ||| | ||||| |||| ||| || | | ||||| | ||||| |||| |||
Sbjct 526 GACAGCATCGAGGGCATCTACGACACGCTGAAGCAGTGTGCACTCATCTCCAAGTCGGCA 585
Query 111849 GGTGGTATCGGGATGCACATCCATGATG--TCAGAGCCAACAAGTCTCGTATTAGAGGTA 111906
|| || ||||| || | || | || || || ||| | | || || |
Sbjct 586 GGAGGAATCGGTGTGGCCGTCA--GCTGCATCCGATCCACCGGGAGCTACATCGCCGGCA 643
Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966
| || || | || | || | | || ||||| | || | ||| |||||| ||||
Sbjct 644 CCAACGGCAACTCCAACGGGCTGGTCCCCATGCTGAGGGTCTACAACAACACAGCACGCT 703
Query 111967 ATGTAAACCAAGCTGGGCGTCG-CAAGGGATCTATCGCAGTC------TATCTTGAGCCA 112019
|||| |||| ||||| | |||| || | ||| || || || |||||
Sbjct 704 ATGTCGACCA----GGGCGGCAACAAGCGACCCGGCGCCTTCGCCATGTACCTGGAGCCG 759
Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079
|||||| || | | || ||||| ||| || ||| | || || |||||| |
Sbjct 760 TGGCACTTTGACGTGTTCGACTTCCTGGAGCTGAAGAAGAAC-ACGGGGA--AGGAGGAG 816
Query 112080 CGGTG---CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136
| | | | | |||||||||| || | ||||| || || || ||||||||||| ||
Sbjct 817 CAGAGAGCCAGAGATCTCTTCTACGGCTTGTGGATCCCCGACCTGTTCATGAAGAGGGT- 875
Query 112137 GAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA- 112192
|||||| | | |||||||| | ||||| | || ||||| || |||
Sbjct 876 --GGAGAGCAACCAGGACTGGTCTCTGATGTGTCCCAGCGAGAGCCCCGGGCTGGACGAG 933
Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252
||| | ||| ||||||||||| |||||||| | || ||| || | |||| |
Sbjct 934 TGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCCAATATGAGCGGGAGGGCCGGGTCAA 992
Query 112253 TGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311
||| |||| ||| | |||||| | || || || |||| || || ||| | |
Sbjct 993 -GCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCATCGAGTCCCAGACGGAGTCGG 1051
Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371
| || || || ||||| |||||||||||||| ||| ||||| || || |||| |||
Sbjct 1052 GCACGCCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGG 1111
Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAG 112430
| |||||| | ||||||||| || |||||| | |||| | ||| ||||||
Sbjct 1112 GAACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTTGAATACTCCAG-TGGCGATGAG 1170
Query 112431 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 112490
||||||||||| || || || ||||||||| || ||| || || ||| |
Sbjct 1171 GTCGCTGTGTGTAATCTGGCCTCCATCGCTCTCAACATGTACGTCACCCCCGAG---CGG 1227
Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550
|| ||||| | | ||||| | || || ||| || || ||||| ||||
Sbjct 1228 ACTTTTGACTTCAAGAAACTGGAGTCTGTGACCAAAGTGATCGTGAAGAACCTGAACAAG 1287
Query 112551 GTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACAC 112607
| || || | || || ||||| || ||| | | || | || || | | | |||
Sbjct 1288 ATCATAGAGATTAACTTCTACCCGGTGCCCGAGGCCGATC---AGTCCAACAAGCGCCAC 1344
Query 112608 CGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA 112667
| || || ||| |||| ||||| || || || || | ||||| || || || |
Sbjct 1345 AGGCCGATCGGTATCGGCGTCCAGGGCCTGGCCGACGCCTTCATCCTGATGCGTTACCCC 1404
Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727
||||| | ||| || || | || | || |||||||| || || |||||
Sbjct 1405 TTTGAAAGCCCCGAGGCCCAGCTGCTGAACATCCAGATCTTTGAGACCATCTACTACGCC 1464
Query 112728 GCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 112787
|| || ||||| || | || |||| | | || || || || || | ||||
Sbjct 1465 GCCCTGGAGGCCAGCTGCGAACTGGCCGCCGAGCTGGGCCCCTACGACACGTACGAGG-- 1522
Query 112788 TCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTT 112844
|||| | ||| |||||| | || || | || ||||||| || || | |||
Sbjct 1523 -CTCCCCCGTCAGCAAGGGCATCCTCCAGTACGACATGTGGG-AGAAGACGCCCACCGAC 1580
Query 112845 CACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903
| | |||| ||| ||| || ||||| ||| || | || | | ||||| ||
Sbjct 1581 CTGTGGGACT-GGAAGCTGCTGAAGGAGAAGATCGCCAAGCACGGCGTGAGGAACAGCCT 1639
Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963
|| |||| || ||||| || ||||||||||| || ||| |||| || || || | | |
Sbjct 1640 GCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCAT 1699
Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023
|| ||||||| | |||||||| | | ||| | |||||||| ||| ||
Sbjct 1700 CGAGGCCTACACCAGCAACATCTACACCCGCCGGGTCCTGTCAGGAGAGTTCCAGATCGT 1759
Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
|||| ||||| | | ||||| | |||| || || ||| | |||| ||||||
Sbjct 1760 CAACCCCCATCTGCTCAAGGACCTGACGGAGAGAGGGCTGTGGGGCGAGGAGATGAAG 1817
>seq496362
Length=882
Score = 122 bits (134), Expect = 1e-22
Identities = 334/504 (66%), Gaps = 16/504 (3%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
|||||||| ||||| | ||| | ||| | ||||| |||| ||||| | | |||
Sbjct 118 TGGACTGCCGAAGAAATTGATTTGTCACAAGATTTAAACGACTGGAATAACAAGTTGAAT 177
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| | ||| | | || || ||| |||| | ||||| || || | || || ||||||
Sbjct 178 AAAGACGAACAATACTTTATCAAACACATTTTAGCATTTTTCGCCGCTTCAGACGGAATT 237
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGAT-C 101992
|| ||| ||| | | | ||||||| |||| ||||||| ||||||||| || |
Sbjct 238 GTAAATGAAAATCTTGCTGAAAACTTTGTAAATGAAGTGCAATATGCTGAAGCGAAATTC 297
Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051
|||||||| || || | |||| ||| ||| | || | || || || | |
Sbjct 298 TTTCTATG-GTTTCCAAATCATGATGGAAAATATTCACAGCGAAACGTATTCCTTGTTAA 356
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAAGCCATCCAAACA 102110
| |||| ||| | || || | || ||||| ||| | | | || || ||| ||
Sbjct 357 TCGACACTTATGTAAAAGACGAAGCAGAGAA--AGCCGATTTATTCAACGCATTAGAAGT 414
Query 102111 GTTCCATG-TATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169
|| | || ||| ||||||||||||| ||||| || | ||| ||||| || |
Sbjct 415 TTTTCCTGCTATCAAAAAGAAAGCGGACTGGGCAATTCAATGGATTGATTCAGA------ 468
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
||| || || |||||| | | || ||||| || || || || |||||||| ||| |
Sbjct 469 TTCTTTCGCAGAGCGATTGATTGCTTTTGCAGCAGTGGAAGGAATTTTCTTCTCAGGTGC 528
Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
|| || | |||| ||| | || || |||||| | |||||||| | ||||| ||
Sbjct 529 TTTTTGTTCCATTTTCTGGTTGAAAAAACGAGGTTTGATGCCAGGATTGACATTCTCAAA 588
Query 102290 CGAGCTTATCTCTCGTGACGAGGG 102313
||| | || ||||||||||| ||
Sbjct 589 CGAATTGATTTCTCGTGACGAAGG 612
>seq504380
Length=601
Score = 113 bits (124), Expect = 6e-20
Identities = 266/391 (68%), Gaps = 22/391 (6%)
Strand=Plus/Plus
Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CG 16029
|||||||||||||| || ||| | ||||| | || || || || |||||||| |
Sbjct 14 TCAAAACCATCCATTTCGACCAATAATTGGTTCAGTGTCTGCTCACGCTCATCATTACCA 73
Query 16030 CTGGC-ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 16088
| | | |||||| ||| | || || || |||||||| |||||||| |||| |
Sbjct 74 CCGCCCATACCAGAGCCAC---GATGACGACCGACCGCATCAATTTCATCAATAAAGATG 130
Query 16089 ATGCATGGT----TGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 16144
|| || || | |||| || | ||| || | ||| |||||||| ||| ||
Sbjct 131 ATACAAGGCGCGCTCTTTTTAGCCTG----TTCGAACATATCGCGTACACGTGAGGCACC 186
Query 16145 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAG 16203
||||| ||||||||||| ||||| | | | | | |||| || ||| || || ||||
Sbjct 187 GACACCGACAAACATCTCAACAAAATCAGAACCTG-AGATTGAGAAGAACGGCACTTTAG 245
Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 16263
|||||| |||||||||| ||| | | || ||||| |||||||| ||| | | |
Sbjct 246 CTTCACCAGCAATGGCTCTGGCTAACAAGGTTTTACCGGTACCTGGAGGACCTACCATTA 305
Query 16264 GGGCACCTCGTGGAATCTTGGCGCCA--CTTCCAAAGTATCTCTCA-GGTTGCTTAAGAA 16320
| ||| ||||||||| | || ||| ||| || || | ||| ||| || ||| ||
Sbjct 306 AGATACCACGTGGAATCGTCGCACCAAGCTTGGTAA--ATTTATCAGGGTCGCGTAA-AA 362
Query 16321 AATCCACAATCTCTTCCAATTCATCTTTGGC 16351
| || || | || ||| ||| ||||||||
Sbjct 363 ACTCGACCACTTCGACCACTTCTTCTTTGGC 393
>seq448634
Length=577
Score = 93.3 bits (102), Expect = 5e-14
Identities = 222/327 (68%), Gaps = 18/327 (6%)
Strand=Plus/Minus
Query 15932 GCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCA---AAACCATCCATCTC 15988
||| || ||||| || || || | ||||||| |||||| || ||||||||||| ||
Sbjct 545 GCGGTTAGTTGCAGCAATAACGATAATACCT---TCGTTACCACCAAAACCATCCATTTC 489
Query 15989 TGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCACCAGC 16045
| | ||||| | ||||| || ||||| || || ||| | | |||||| | |
Sbjct 488 GACTAGCATTTGGTTTAGCGTTTGCTCACGTTCGTCGTTACCGCCGCCCATACCAGCGCC 429
Query 16046 ACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT--TGATTT 16103
|| ||| || || ||||| || |||||||| |||| || || ||| || |||
Sbjct 428 AC---GTTTACGACCTACAGCATCTATTTCATCAATAAAGATAATACAGGGTGATGCTTT 372
Query 16104 TCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCC 16163
| ||| || || | ||| ||||| || |||||||||||||||||||| ||
Sbjct 371 TTT--AGCTTGCTCGAACATATCTCGTACGCGAGATGCGCCCACACCAACAAACATTTCA 314
Query 16164 ACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCG 16222
||||||| | | ||| || | | ||| || || || | |||||| |||| ||||
Sbjct 313 ACAAAGTCCGAACCAGAA-ATAGTAAAGAACGGCACTTTTGCTTCACCAGCAACGGCTTT 255
Query 16223 GGCGAGAAGAGTCTTACCCGTACCTGG 16249
|| || | || ||||| ||||| ||
Sbjct 254 AGCAAGTAACGTTTTACCTGTACCAGG 228
>seq478780
Length=440
Score = 84.2 bits (92), Expect = 3e-11
Identities = 139/196 (71%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTT--GATTTTCGCGAGCGACTT 16116
|| || |||||||| ||||| || |||| ||| || ||| |||||| ||| ||
Sbjct 439 CCTACAGCATCAATTTCATCGATAAAGATGATACAAGGTGCAGATTTTTT--AGCTTGTT 382
Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176
|||| | ||| || ||||| || || ||||| |||||||| |||||||| | |
Sbjct 381 CAAACATATCACGCACACGAGATGCACCAACACCGACAAACATTTCCACAAAATCAGAAC 322
Query 16177 CGGAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235
| ||| || | | ||| || || ||||||||||| ||||| || || || | ||
Sbjct 321 CTGAA-ATGGTAAAGAATGGCACCTTAGATTCACCAGCAATAGCCTTCGCTAGTAAGGTT 263
Query 16236 TTACCCGTACCTGGCT 16251
||||| ||||||||||
Sbjct 262 TTACCTGTACCTGGCT 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616664882841440
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