Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_014792.1
Length=169285
Score E
Sequences producing significant alignments: (Bits) Value
seq509673 143 3e-29
seq449735 102 9e-17
>seq509673
Length=441
Score = 143 bits (158), Expect = 3e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 141354 TTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 141413
||||| ||||| || || || |||||||| | || ||||| ||||| ||||| |||
Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278
Query 141414 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 141473
|| ||||| || | ||| |||||||| ||||||||||| || ||| | || ||
Sbjct 279 TTTTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCT 338
Query 141474 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 141533
|| |||||||||| || |||||||| ||| |||||||||| |||||||| |||| ||
Sbjct 339 GCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAG 398
Query 141534 AACGGAATAACACCAGTATGCT 141555
|| || ||| ||| |||||||
Sbjct 399 AATGGGATACAACCCGTATGCT 420
>seq449735
Length=3187
Score = 102 bits (112), Expect = 9e-17
Identities = 149/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 141347 CATCAGGTTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 141406
||| || ||||| ||||| || || || || | ||| | | |||||| || ||||| ||
Sbjct 444 CATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCC 385
Query 141407 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA--ATAA 141464
||| || || || || | | ||||| ||||| |||||||| | || || | ||
Sbjct 384 GCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAA 325
Query 141465 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAA 141524
| || || ||||||||||| | || ||||| |||||| |||||| || ||||| ||
Sbjct 324 G--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAG 267
Query 141525 TGTTTCCAGAACGGAATAACACCAGTATG 141553
|| || | || |||||| ||| |||||
Sbjct 266 TGCTTATAAAAAGGAATACAACCCGTATG 238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538026456560400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |