Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq509673 143 3e-29 seq449735 102 9e-17 >seq509673 Length=441 Score = 143 bits (158), Expect = 3e-29 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 141354 TTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 141413 ||||| ||||| || || || |||||||| | || ||||| ||||| ||||| ||| Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278 Query 141414 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 141473 || ||||| || | ||| |||||||| ||||||||||| || ||| | || || Sbjct 279 TTTTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCT 338 Query 141474 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 141533 || |||||||||| || |||||||| ||| |||||||||| |||||||| |||| || Sbjct 339 GCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAG 398 Query 141534 AACGGAATAACACCAGTATGCT 141555 || || ||| ||| ||||||| Sbjct 399 AATGGGATACAACCCGTATGCT 420 >seq449735 Length=3187 Score = 102 bits (112), Expect = 9e-17 Identities = 149/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 141347 CATCAGGTTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 141406 ||| || ||||| ||||| || || || || | ||| | | |||||| || ||||| || Sbjct 444 CATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCC 385 Query 141407 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA--ATAA 141464 ||| || || || || | | ||||| ||||| |||||||| | || || | || Sbjct 384 GCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAA 325 Query 141465 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAA 141524 | || || ||||||||||| | || ||||| |||||| |||||| || ||||| || Sbjct 324 G--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAG 267 Query 141525 TGTTTCCAGAACGGAATAACACCAGTATG 141553 || || | || |||||| ||| ||||| Sbjct 266 TGCTTATAAAAAGGAATACAACCCGTATG 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538026456560400