Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015157.1
Length=125956
Score E
Sequences producing significant alignments: (Bits) Value
seq516866 111 1e-19
>seq516866
Length=361
Score = 111 bits (122), Expect = 1e-19
Identities = 207/300 (69%), Gaps = 12/300 (4%)
Strand=Plus/Minus
Query 125428 TTTGGTGGAACTATCCAAGAGTCGACAGGGTTGAAACTTCTAGATTCACATATTGGTGCA 125487
|||||||| |||| | | || | | ||| || || | || ||| ||| |||||||
Sbjct 356 TTTGGTGGCACTA--CTACAGACAA-AGGTTTTAAGTTACTTGATGAGCATGTTGGTGCC 300
Query 125488 ATCTACGGGGATTCTATCACACTAGAACGCCAAGATGAGATTATCAAGCGTCTTATTACT 125547
|| || || ||| | || || ||| |||||| | |||| | ||||| | || |
Sbjct 299 ATTTATGGCGATGCAATTACTCTACCGCGCCAACGTCAGATATTACAGCGTTTAATGGAT 240
Query 125548 AAAGGTTTTGTTCCTAGTGTTGTATTAGGTATTGGTAGCTACACTTACCAATATGTCACT 125607
||||| |||| ||| || || ||||| |||||| || | ||||| ||||||||
Sbjct 239 AAAGGCTTTGCGTCTAAAGTGGTTTTAGGAATTGGTTCTTATAGCTACCAGTATGTCACC 180
Query 125608 CGTGATACACACGGTTCTGCAGTTAAAGCAACATGT---GTACAAAAAGGTGAAGGTAAT 125664
|||||||| || ||||| ||||||||||| || || || |||| |||| || | |
Sbjct 179 CGTGATACCCATGGTTCAGCAGTTAAAGCTACTAGTGTGGTTAAAAACGGTG-AGCGAGT 121
Query 125665 TACGAACCAATCTTCAAAGACCCTAAGACAGATAAGAGTAAGAAATCTGCAAAGGGGTTA 125724
|| || || ||||| ||||| |||||| || || |||||||| || || |||
Sbjct 120 GGCG-----ATATTTAAAGATCCTAAAACAGATGCGAAGAAAAAATCTGCTAAAGGATTA 66
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 400353784221974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |