Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015157.1 Length=125956 Score E Sequences producing significant alignments: (Bits) Value seq516866 111 1e-19 >seq516866 Length=361 Score = 111 bits (122), Expect = 1e-19 Identities = 207/300 (69%), Gaps = 12/300 (4%) Strand=Plus/Minus Query 125428 TTTGGTGGAACTATCCAAGAGTCGACAGGGTTGAAACTTCTAGATTCACATATTGGTGCA 125487 |||||||| |||| | | || | | ||| || || | || ||| ||| ||||||| Sbjct 356 TTTGGTGGCACTA--CTACAGACAA-AGGTTTTAAGTTACTTGATGAGCATGTTGGTGCC 300 Query 125488 ATCTACGGGGATTCTATCACACTAGAACGCCAAGATGAGATTATCAAGCGTCTTATTACT 125547 || || || ||| | || || ||| |||||| | |||| | ||||| | || | Sbjct 299 ATTTATGGCGATGCAATTACTCTACCGCGCCAACGTCAGATATTACAGCGTTTAATGGAT 240 Query 125548 AAAGGTTTTGTTCCTAGTGTTGTATTAGGTATTGGTAGCTACACTTACCAATATGTCACT 125607 ||||| |||| ||| || || ||||| |||||| || | ||||| |||||||| Sbjct 239 AAAGGCTTTGCGTCTAAAGTGGTTTTAGGAATTGGTTCTTATAGCTACCAGTATGTCACC 180 Query 125608 CGTGATACACACGGTTCTGCAGTTAAAGCAACATGT---GTACAAAAAGGTGAAGGTAAT 125664 |||||||| || ||||| ||||||||||| || || || |||| |||| || | | Sbjct 179 CGTGATACCCATGGTTCAGCAGTTAAAGCTACTAGTGTGGTTAAAAACGGTG-AGCGAGT 121 Query 125665 TACGAACCAATCTTCAAAGACCCTAAGACAGATAAGAGTAAGAAATCTGCAAAGGGGTTA 125724 || || || ||||| ||||| |||||| || || |||||||| || || ||| Sbjct 120 GGCG-----ATATTTAAAGATCCTAAAACAGATGCGAAGAAAAAATCTGCTAAAGGATTA 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400353784221974