Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015159.1 Length=39162 Score E Sequences producing significant alignments: (Bits) Value seq512931 244 3e-60 >seq512931 Length=538 Score = 244 bits (270), Expect = 3e-60 Identities = 376/531 (71%), Gaps = 19/531 (4%) Strand=Plus/Plus Query 37078 CCTGACCACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGT 37137 ||||||||| || || || || || |||||| | || || | || ||| ||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 37138 GCAGACATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCGACACAGGCTGCA 37197 || ||||| ||||||||||||||||||||||| || ||||||| |||||| | ||| Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129 Query 37198 AGAGACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCCTAATGGTACT 37257 || || | ||||| ||||| |||||||| || || || ||| | |||||| | ||||| Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189 Query 37258 ATCATCTACCTTGGTACTCCACAATGCGAAATGACGCTATACAGAGAGCTTGAGAATCGT 37317 ||||||||| | || || ||||| ||||||||| || ||||| || |||||| | || Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249 Query 37318 GGTTACAAGACTACTATCTGGCCAGCTCGTTATCCTAAAGATATGAACGATTTGGAGTCT 37377 || ||| ||| || |||||||| || || || ||| ||| || || | ||||| Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309 Query 37378 TA-TGGTA----ATCGTCTTGCTCCAATG-------CTTA--AAGATGAACTA-ATGGAG 37422 || ||| | | | | || | | | |||| | | | || | |||| Sbjct 310 TACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGAA 369 Query 37423 AAC--CCTGAAGCTTACTGGTGGCAACCTACTGACCCTGTTCGATTCGATGATGAAGACT 37480 || | |||||| | ||| | ||||| |||||| |||||||||||||||||||| Sbjct 370 GACGACGAGAAGCT--GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACC 427 Query 37481 TACGGGAACGTGAGCTGTCTTATGGTAAAGCTGGTTTTGCTCTACAGTTCATGTTGAACC 37540 | || || || || || || ||||| || | ||| || ||||||||||||||| | |||| Sbjct 428 TGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACC 487 Query 37541 CTAACCTGAGTGATGCTGAGAAATACCCTCTGAAGCTTCGTGATTTCATCG 37591 | ||||| || || ||||| ||||| ||||||| ||||||| |||| Sbjct 488 CGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124415529870576