Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015249.1 Length=39270 Score E Sequences producing significant alignments: (Bits) Value seq512931 170 5e-38 >seq512931 Length=538 Score = 170 bits (188), Expect = 5e-38 Identities = 356/519 (69%), Gaps = 30/519 (6%) Strand=Plus/Plus Query 37112 CCCGACCACTCACCTTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TGACTGGTAGTCG 37170 || |||||| || || |||||||| |||||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37171 TGCTGACATCATTATCGCAGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGCTCTGC 37230 |||||||||| | || || |||||||||||||| ||||||||| | ||| || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37231 TCGTGAGAAGCTCTGGACGTTGGTAACTGAGTTCGCTGCATTACTTAAGCCGCTGCCTAC 37290 | || | || | | |||||| || |||| ||| | || ||||| || || Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---AC 183 Query 37291 CTCTCGTGTTATCTACCTTGGCACACCTCAAACTGAGATGACGCTCTACAAGGAACTTGA 37350 || | |||||| | || || || || || || ||||| ||||||| ||||||||| Sbjct 184 GGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242 Query 37351 GGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCTCGCAATGATGCTGA 37410 ||| | || ||| || |||||||| |||| || ||||| ||| ||||| Sbjct 243 GGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299 Query 37411 ----GGCTCTCTACT---------ATGGGGACCGCTTGGCTCCGATGCTTAAGA--CTGA 37455 | || ||||| | || | |||| || | |||| | || | Sbjct 300 CCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA 358 Query 37456 ATACGATG-AAGGCTTCGAGTTACT-TCGTGGTCAACCTACTGACCCTGTTCGATTCGAC 37513 | | || ||| | |||| || | ||| | ||||| |||||| |||||||||| Sbjct 359 AGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCGATTCGAT 417 Query 37514 ATGGATGACCTCCGTGAACGTGAACTCGAATATGGTAAAGCTGGCTACACTCTTCAGTTC 37573 || ||||| ||||| || |||||| |||||| || | ||||| | |||| |||||| Sbjct 418 GATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTC 477 Query 37574 ATGCTCAACCCGAACCTTAGTGATGCCGAGAAGTACCCG 37612 |||||||||||||||||||| || ||||||||||||| Sbjct 478 ATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCG 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124758973210368