Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015249.1
Length=39270
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 170 5e-38
>seq512931
Length=538
Score = 170 bits (188), Expect = 5e-38
Identities = 356/519 (69%), Gaps = 30/519 (6%)
Strand=Plus/Plus
Query 37112 CCCGACCACTCACCTTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TGACTGGTAGTCG 37170
|| |||||| || || |||||||| |||||| | ||||| | || |||||||||| ||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 37171 TGCTGACATCATTATCGCAGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGCTCTGC 37230
|||||||||| | || || |||||||||||||| ||||||||| | ||| || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 37231 TCGTGAGAAGCTCTGGACGTTGGTAACTGAGTTCGCTGCATTACTTAAGCCGCTGCCTAC 37290
| || | || | | |||||| || |||| ||| | || ||||| || ||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---AC 183
Query 37291 CTCTCGTGTTATCTACCTTGGCACACCTCAAACTGAGATGACGCTCTACAAGGAACTTGA 37350
|| | |||||| | || || || || || || ||||| ||||||| |||||||||
Sbjct 184 GGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242
Query 37351 GGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCTCGCAATGATGCTGA 37410
||| | || ||| || |||||||| |||| || ||||| ||| |||||
Sbjct 243 GGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299
Query 37411 ----GGCTCTCTACT---------ATGGGGACCGCTTGGCTCCGATGCTTAAGA--CTGA 37455
| || ||||| | || | |||| || | |||| | || |
Sbjct 300 CCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA 358
Query 37456 ATACGATG-AAGGCTTCGAGTTACT-TCGTGGTCAACCTACTGACCCTGTTCGATTCGAC 37513
| | || ||| | |||| || | ||| | ||||| |||||| ||||||||||
Sbjct 359 AGGAGCTGGAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCGATTCGAT 417
Query 37514 ATGGATGACCTCCGTGAACGTGAACTCGAATATGGTAAAGCTGGCTACACTCTTCAGTTC 37573
|| ||||| ||||| || |||||| |||||| || | ||||| | |||| ||||||
Sbjct 418 GATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTC 477
Query 37574 ATGCTCAACCCGAACCTTAGTGATGCCGAGAAGTACCCG 37612
|||||||||||||||||||| || |||||||||||||
Sbjct 478 ATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCG 516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124758973210368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |