Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq506238 122 1e-22
seq511551 95.1 2e-14
seq296889 84.2 3e-11
>seq506238
Length=275
Score = 122 bits (134), Expect = 1e-22
Identities = 130/172 (76%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 27983 CTGTAAAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAA 28042
||||||| ||||| | | || || | ||||||||||| |||| || ||||| | |
Sbjct 50 CTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCA 109
Query 28043 CGGCATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCAT 28102
| || ||||| ||||| ||||| || |||||||| |||||||| || ||||| ||||
Sbjct 110 CTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCAT 169
Query 28103 CTTCTAAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTTC 28154
|||| || ||||| | || ||||| || |||||||||||||| |||||
Sbjct 170 CTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq511551
Length=634
Score = 95.1 bits (104), Expect = 2e-14
Identities = 227/338 (67%), Gaps = 4/338 (1%)
Strand=Plus/Minus
Query 29785 TTATAAGAACCTGTGACCTTTACCACTTGATCGTAACTCATAATATCCGGATATATACGC 29844
||| || ||| || |||| ||| | | |||||| | |||||||| || || ||||||
Sbjct 384 TTAAAACCACCAGTAACCTCTACAATCTTATCGTAGTTGATAATATCAGGGTACATACGC 325
Query 29845 TTAGACGAACACTCAAGAGCAAGTTGTTTTATATCGTAATGAGGATCCCAAGGATTCAGA 29904
||| | |||||| ||||| | ||||| |||| || | || || | || |
Sbjct 324 TTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTCCTGTTTAAAG 265
Query 29905 TTAAGACCGTCTTTAAGAGTGAATACAAGTTTAGGAAATACAGCAGT-TTCTTTATCTTC 29963
|| | ||||||||||| ||| | | ||| ||||| ||||| || || ||||| | |
Sbjct 264 TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAATACCGCTGTCCTCTTT-GATGC 206
Query 29964 ACCAAGTCCATCAATACGGACTCTCAA-GATCATTTCCTGAACTAGTTTAGCCTCTGGAC 30022
||| | || | |||||| || ||||| ||| || ||||| ||| |||| ||| ||
Sbjct 205 ACCTAAGCCTTTAATACGCAC-CTCAAGGATGGATTTCTGAATTAGCTTAGACTCCCAAC 147
Query 30023 TAGAACCAATACCAAACGTAACGGTTGTGAATGGAGTCTGACCTTGACCGGTAGTTAATG 30082
|| ||| | |||||| || || || || | || || | | || ||| |
Sbjct 146 AAGTACCTAAACCAAAACCTACCGTACAAAAGGGGCTTTGTCCATTTGCTGTGTGTAAGG 87
Query 30083 AGTTCAATTGATACTCAAGCGTTTGGATAGAATCATAA 30120
||| | || |||||||| |||||| || |||||||
Sbjct 86 TGTTAATTTCGTACTCAAGACTTTGGAAAGCATCATAA 49
>seq296889
Length=3494
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 112288 GGATGTGGTGAAATTGGCAGACACACCAGATTTAGGTTCTGGCG-CTTATAGCGTGACGG 112346
|||||||||| |||||| |||| ||||||||||||||||||||| | | | |||| |
Sbjct 141 GGATGTGGTGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCAAGGTGTGAGAG 82
Query 112347 TTCGAGTCCGTCCATCCCCACCA 112369
|||||||| |||| ||||||||
Sbjct 81 TTCGAGTCTCTCCAGCCCCACCA 59
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 747661108404880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |