Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015264.1
Length=40973
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 610 2e-170
seq518992 365 1e-96
seq501937 318 2e-82
seq521066 311 2e-80
seq524349 248 2e-61
seq500082 201 3e-47
seq489868 140 8e-29
seq498418 136 1e-27
>seq512931
Length=538
Score = 610 bits (676), Expect = 2e-170
Identities = 458/538 (85%), Gaps = 0/538 (0%)
Strand=Plus/Plus
Query 36313 CCTGCGCGTCCTGACCACTCGCCCTCGGTGAAGTCTGTGGGTGTGACTGGTGGTATGACT 36372
||||| |||||||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACT 60
Query 36373 GGTAGCCGTGCTGACATCCTCATCGCGGACGACGTGGAAGTACCGGGCAACTCTGGGACG 36432
||||||||||||||||||||||| ||||| ||||| || || || ||||||||||| ||
Sbjct 61 GGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACA 120
Query 36433 CAATCTGCACGGGACCACCTCGGTGAACTCGTAAAGGAATTCGATGCGATCCTGAAGCCG 36492
|| || ||| |||| ||||| || || || |||||||||||||||||||||||||||||
Sbjct 121 CAGTCCGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT 180
Query 36493 GACGGCACGATCATCTACCTCGGGACCCCACAGACTGAAATGACCCTTTACCGGGAACTT 36552
||||| |||||||||||| | || ||||||||||| ||||||||||| ||| ||||||||
Sbjct 181 GACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTT 240
Query 36553 GAGGACCGTGGCTACTCGACGACTATCTGGCCTGCACGATACCCTCGGGACGTGGCTGAC 36612
|||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 241 GAGGACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGAC 300
Query 36613 CTTGAGTCCTACTTCCATGCCAAGGGCAATCGTTCGCGACTTGACCCAACCATGCTGGCA 36672
||||||||||||| || ||||||||||| || || || || |||| ||||||||
Sbjct 301 CTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG 360
Query 36673 GAACTTGAGGCCGACTCACGGCTCTTCTGGAAGCCCACAGACCCTGTGCGGTTCGATGAT 36732
|| || || | |||| ||| ||||||||||| ||||||||| | || |||||||||
Sbjct 361 GAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGAT 420
Query 36733 GAGGACCTTCGGGAACGTGAGCTGTCATATGGTAAGGGTGGCTTTGCATTGCAGTTCATG 36792
|| ||||| || || || || || |||||||| ||||||||||| || | |||||||||
Sbjct 421 GAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATG 480
Query 36793 CTCAACCCAAACCTCAGCGACATCGAGAAGTACCCGCTCAAGCTACGTGACTGGATCG 36850
|||||||| ||||| ||||||||||||||||||||| | ||||| ||||| |||||||
Sbjct 481 CTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
>seq518992
Length=261
Score = 365 bits (404), Expect = 1e-96
Identities = 237/260 (91%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 9577 CAAAGCTGCCCCTTACGCGGCCATTCAGAAGCCCGACTTCGGCACCACCGAGTTCCCGCA 9636
||| |||||||| || ||||| || || |||||||||||||||||||| |||||||| ||
Sbjct 260 CAAGGCTGCCCCATATGCGGCGATCCAAAAGCCCGACTTCGGCACCACTGAGTTCCCACA 201
Query 9637 ACCACGCGGCGAGTACAAGGTGAACCTCATCGTGCCCCTGAAGGATGCACAGGCTGACAT 9696
||| || |||||||||||||||||||| |||||| || ||||||||||||| ||||||||
Sbjct 200 ACCTCGTGGCGAGTACAAGGTGAACCTGATCGTGTCCTTGAAGGATGCACAAGCTGACAT 141
Query 9697 CAAGCGCATCACCAAGATTTACGAAGAGTCCTACGCCGAGTTCTTGGCTGAGCATGAAGC 9756
|||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct 140 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGAACACGAAGC 81
Query 9757 GAACCCACCAAAGGTCGCTCCGGGCAAGCGTCCAGTGCCGGTCCGTCAAGGTGACCTTCC 9816
|||||| |||||||||||| | ||||||||||| || |||||||||||||||||||||||
Sbjct 80 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCCGTACCGGTCCGTCAAGGTGACCTTCC 21
Query 9817 GTTCTTCGAGGACGGCAACG 9836
||||||||||||||||||||
Sbjct 20 GTTCTTCGAGGACGGCAACG 1
>seq501937
Length=338
Score = 318 bits (352), Expect = 2e-82
Identities = 280/345 (81%), Gaps = 7/345 (2%)
Strand=Plus/Plus
Query 33124 ACCAAGTACCGGGTGCCTCATGGGCGCTCTCTGCTGGTCAAGCTGGACACAGTGCGATTG 33183
||||||||||||||| ||||||||| ||| |||||||||| || || ||| | | ||
Sbjct 1 ACCAAGTACCGGGTGTCTCATGGGCTCTCGCTGCTGGTCAGGCGGGGCACTCTCTGGCTG 60
Query 33184 GCTTGGCGGGATCTTCGGGTCGCCGTCAGGATCAAGAGTACATGACCAGCCTCTACAACG 33243
|||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 61 GCTTGGCGGGATCTAACGGTCGCCGTCAGGACCAAGAGTACATGACCAGTCTCTACAACG 120
Query 33244 GCCTGCGCGGGATCATCCCTAACGACCCAGCGTCTCAGTTCCTCCTGATGAAAATCATGG 33303
| || || |||||||| ||||||||||| || |||||||||||||||||||| |||||||
Sbjct 121 GGCTCCGTGGGATCAT-CCTAACGACCCGGCCTCTCAGTTCCTCCTGATGAAGATCATGG 179
Query 33304 AAGAGCAGGGCATTGAGGCACGGTAAAACCCCTCACCTAAACAGGGAGTGCTTACACAGG 33363
|||||||||| || || ||||||||||||| |||||||| || |||| |||| |||| |
Sbjct 180 AAGAGCAGGGTATCGAAGCACGGTAAAACCACTCACCTATACCGGGA--GCTTGCACA-G 236
Query 33364 CTCCCATTCATTTCTTAAGGAGGCCCACATGGCTGACGCTCCAAAGACAACGATCACGTA 33423
||||| | || | ||||||| || ||||| |||||||||||| | ||||
Sbjct 237 CTCCC---CTTTCCATAAGGAGACCTCTATGGCACTCGCTCCAAAGACTGTCTTGGCGTA 293
Query 33424 TCCTCTTGACGGATCGAACAAAGACTTCCCGATCCCTTTCGAGTA 33468
||| |||||||| |||| ||||||| |||||| || || ||
Sbjct 294 TCCGCTTGACGGTGCGAATCGAGACTTCGTGATCCCCTTTGAATA 338
>seq521066
Length=280
Score = 311 bits (344), Expect = 2e-80
Identities = 237/280 (85%), Gaps = 0/280 (0%)
Strand=Plus/Plus
Query 19115 CATGGAAGCCAACAGTTACCGCACCACGCTGCACGAGCTGATCCGTCAGTTGGTCATTGC 19174
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||
Sbjct 1 CATGGAAGCCAACAGTTACCGCACCACGTTGCACGAGCTGATTCGTCAGTTGGTGATCGC 60
Query 19175 GGGTGCTGGGTGTCTGTACCTTCCGCCACCTGAGAGTTCGTCTCAAGGGTCGCCCATGAA 19234
|| |||| |||||||||||||| |||||| ||||| | |||||| || |||||
Sbjct 61 TGGGTCTGGCCTGCTGTACCTTCCGCCTCCTGAGGGTTCGACCCAAGGGAGCCCTATGAA 120
Query 19235 GCTCTACACGCTGCACAACCACGTCGTCCAACGGGATGCGTTCGGTAACGTCCTGCAAAT 19294
|||||||||||||||||||||||| ||||||||||| | ||||| |||||||| || ||
Sbjct 121 GCTCTACACGCTGCACAACCACGTAGTCCAACGGGACTCCTTCGGGAACGTCCTACAGAT 180
Query 19295 CTGCACGCTCGACAGAGTGGCCTTCGCGGCCCTTCCTGAAGACGTTCGGACCAAGCTTGA 19354
| |||||||||| |||||||| |||||||||||||||||||| ||| |||| |||||
Sbjct 181 CGTTACGCTCGACAAGGTGGCCTTTGCGGCCCTTCCTGAAGACGTGCGGTCCAAACTTGA 240
Query 19355 CGGCGAACACAAACCGGACGAAGAGATCGAAGTGTACACC 19394
||| || || || || || |||||||||||||| | ||||
Sbjct 241 CGGAGAGCATAAGCCCGATGAAGAGATCGAAGTCTTCACC 280
>seq524349
Length=315
Score = 248 bits (274), Expect = 2e-61
Identities = 247/316 (78%), Gaps = 3/316 (1%)
Strand=Plus/Plus
Query 12531 GACCAAATCTGGAACGCCCCGAAGTACGTCCCCGATGGTGTGGTCTCCGCGTTGTCCCTA 12590
|||||| | |||||||||| |||||||||||| |||||||||||||| ||| || |||
Sbjct 1 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTACCTT 60
Query 12591 AAGGAGCGCATCAAGGCCAAGAAGGTCGTGGCGTCAATGCCATTGGTCGGCCCTGAAGAG 12650
|||| |||||||| | |||||||| | | || ||||| ||||| || ||| | |||
Sbjct 61 AAGGGCCGCATCAAAGAAAAGAAGGTTATCACTTCGATGCCTTTGGTGGGACCTCACGAG 120
Query 12651 CT-TCGTGAAATGACCAAAGAGATCCGTGGTGGAGAGGTCATTCTGGTCACGTCGGGTAG 12709
|| || | |||||||| | ||||| | || || |||||||||||||| |||||
Sbjct 121 CTGTCCCG-CATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGCTC 179
Query 12710 CGGCTCCGGCAAGTCTACCTACGTCCGTCAGAACACCTACAATCTGTTCCACTACAGCAA 12769
|||||| |||||||| || | |||||| |||||||||||||| | ||||| | |
Sbjct 180 CGGCTCGGGCAAGTCCACGTTCGTCCGACAGAACACCTACAACGTCTTCCATGAGGCGAC 239
Query 12770 GATCGCTGTGGGCGTAGCGATGCTCGAAGAGTCCGTAGAGGAAA-CCGTACAGGACATCG 12828
|||| | |||||||| |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct 240 GATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCGTTGAGGAAACCCGTACAGGACATCG 299
Query 12829 TTGGTTTGCATATGGG 12844
| ||| | ||||| ||
Sbjct 300 TAGGTCTCCATATCGG 315
>seq500082
Length=313
Score = 201 bits (222), Expect = 3e-47
Identities = 219/289 (76%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 4492 AATGGCTGATGATCCACGGGGCCAACACAGCGGGCGTCGATAAGGTTCCTTTTGATGAAC 4551
||||||| ||||| |||||||||||||| || || ||||||||||| ||||| ||| |||
Sbjct 299 AATGGCTCATGATTCACGGGGCCAACACTGCTGGGGTCGATAAGGTCCCTTTCGATCAAC 240
Query 4552 GGAAACAATGGGTTCGCGACAATGAA--GACTGCATCCTGCGTTGCGCAAGAGACCCACT 4609
| || ||||||||||| ||||||||| |||| ||||| || ||||| |||||| ||
Sbjct 239 GCAAGCAATGGGTTCGTGACAATGAATCGACT--ATCCTCCGATGCGCTGAAGACCCGCT 182
Query 4610 TCAGAACACAGAATGGATGTCAATGGATTCTCCCTTTTGCTTCCTTGCCTTCTGTTTTGA 4669
|||| || |||||| ||||| || ||||| || ||| | || ||||| || ||
Sbjct 181 CACTCACACCGAGTGGATGGGGATGGACTCGCCCTTCTGTTTCTTGGCGTTCTGCTTCGA 122
Query 4670 ATGGGCTGGAGTCAAGCGCGACGGTGAGAACCACGTATCCGCTCTGCCCATCGCTTTTGA 4729
||||| || ||| ||||| || | ||| ||||||||| || |||||||||||
Sbjct 121 GTGGGCCGGTGTCGTTCGCGATGGAGCTGCACACCGATCCGCTCTACCAATCGCTTTTGA 62
Query 4730 TGGGTCTTGCTCAGGCATTCAGCACTTTTCTGCAATGCTACGAGACGAA 4778
|| || || || || ||||| |||||||| ||||| || ||||||
Sbjct 61 CGGAAGCTGTTCGGGTATCCAGCATTTTTCTGCCATGCTCCGGGACGAA 13
>seq489868
Length=343
Score = 140 bits (154), Expect = 8e-29
Identities = 107/124 (86%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 860 GTCGTGAACGTGATTCACAGTGACATCGGGCTGGAT-GCGTCCAGTAACCTCAACGCTTT 918
||||||||||| || ||||||||||||| |||||| || ||||| | | | | ||| |
Sbjct 1 GTCGTGAACGTAATCAACAGTGACATCGGTCTGGATCGCTTCCAGCACCGTGCAAGCTCT 60
Query 919 GACCGAGTAGCGTTAATCGGTGGCCTTCT-CTTGAGGGTCACCCGTTAAATCCACTCACT 977
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 GGTCGAGTAGCGTTAATCGGTGGCCTTCTTCTTGAGGGTCACCCGTTAAATCCACTCACT 120
Query 978 GCTA 981
| ||
Sbjct 121 GGTA 124
Score = 140 bits (154), Expect = 8e-29
Identities = 107/124 (86%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 40848 GTCGTGAACGTGATTCACAGTGACATCGGGCTGGAT-GCGTCCAGTAACCTCAACGCTTT 40906
||||||||||| || ||||||||||||| |||||| || ||||| | | | | ||| |
Sbjct 1 GTCGTGAACGTAATCAACAGTGACATCGGTCTGGATCGCTTCCAGCACCGTGCAAGCTCT 60
Query 40907 GACCGAGTAGCGTTAATCGGTGGCCTTCT-CTTGAGGGTCACCCGTTAAATCCACTCACT 40965
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 GGTCGAGTAGCGTTAATCGGTGGCCTTCTTCTTGAGGGTCACCCGTTAAATCCACTCACT 120
Query 40966 GCTA 40969
| ||
Sbjct 121 GGTA 124
>seq498418
Length=347
Score = 136 bits (150), Expect = 1e-27
Identities = 129/164 (79%), Gaps = 8/164 (5%)
Strand=Plus/Plus
Query 38965 CGCTCTTTAACAACTTGGATGCAACATGGTCTGCAAGGCTCCGAAAG----GACACCTAC 39020
||||||||||||| ||||| | ||||| | |||| ||| || || | |||
Sbjct 29 CGCTCTTTAACAATTTGGA----ATTTGGTCGGTCAGGCACCGTAACAGGTGAAAGATAC 84
Query 39021 AGGCATCGCTACGAAGGCAAGCACTGAGCCTTCTCATAGCGCCTTTGAGAACCTGAACGG 39080
|||||||||||||||||||||||||||||||| | ||| |||||||| || ||||||
Sbjct 85 CGGCATCGCTACGAAGGCAAGCACTGAGCCTTCCTACAGCACCTTTGAGGGCCCGAACGG 144
Query 39081 ATGTTACGGGTAGGGTTAGCAAGGGCCTTATGGGAACCACTTAG 39124
|||| ||||||| ||| |||||||| ||| ||||||| |||||
Sbjct 145 ATGTCACGGGTACGGTCAGCAAGGGTCTTGTGGGAACACCTTAG 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130174565873940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |