Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq509954 98.7 1e-15 >seq509954 Length=433 Score = 98.7 bits (108), Expect = 1e-15 Identities = 247/374 (66%), Gaps = 1/374 (0%) Strand=Plus/Plus Query 103562 TGAACGCTGAAGCAGAACTCGCTAACATCCTGTCGAGCGAGATTCTTGCTGAGATCAACC 103621 || |||| |||| |||||| || || || || || | || |||||||| || || |||| Sbjct 31 TGGACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACC 90 Query 103622 GTGAAGTCATCAGAACCATCTATAAGGTTTCTGAGCAAGGTGCTGTTTCTAACACCGCTA 103681 |||| | || | ||| | ||| | | | | ||||| || | || | Sbjct 91 GTGAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACAAACTGGTTCAGCAA 150 Query 103682 CCGCTGGTGTATTCGACCTCGACATCGACTCCAACGGTCGCTGGAGTGTTGAGAAGTTCA 103741 ||||||| | ||||| | ||| | || | || ||||||||| || || || |||| Sbjct 151 ACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCA 210 Query 103742 AGGGTCTCCTGTTCCAAATCGAGCGTGACGCTAACGCAATTGCACAGCGCACTCGTAGAG 103801 | || || |||||||||| || ||||| |||||| ||| || | || | | | Sbjct 211 AAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTG 270 Query 103802 GAAAGGGCAACATGATCCTCTGCTCCGCAGACGTTGCTTCCGCCCTCACCATGGCAGGTG 103861 | || || ||| | || |||| || | ||||| ||||| || | | || || Sbjct 271 GTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAA 330 Query 103862 TACTTGATTACACCCCTGCCCTCAACGCTAACCTT-AACGTTGATGACACCGGTAACACC 103920 | ||||||| | | ||||| || || || || || || ||||| |||||||| || Sbjct 331 TCCTTGATTTCGCACCTGCTATCTCTGCAAATCTACAAAGTAGATGATACCGGTAATACA 390 Query 103921 TTCGCTGGTGTTCT 103934 || ||||||||||| Sbjct 391 TTTGCTGGTGTTCT 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606387240760080