Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 176 5e-39
seq508167 150 2e-31
seq515292 129 7e-25
seq293205 102 9e-17
seq522593 98.7 1e-15
seq409479 95.1 1e-14
seq472080 91.5 2e-13
seq95357 82.4 9e-11
>seq509954
Length=433
Score = 176 bits (194), Expect = 5e-39
Identities = 229/315 (73%), Gaps = 4/315 (1%)
Strand=Plus/Plus
Query 111949 TTGCTCAAGACTTGAAAGCTATCCACGGATTAGATGCAGAGTCTGAGTTGGCAAACATTC 112008
||||||| || |||||||| | || || || || ||||| || | ||||| ||||
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 112009 TCTCAACAGAGATCCTTGCTGAAATCAACAGAGAAGTTGTTAGAACTGTATACAGAGGTG 112068
| ||||| || || ||||| ||||| ||| | || | || | || ||||| | ||
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120
Query 112069 CAAAACCTGGTGCACAGGCTAACGTT--GCTAACGCGGGTGTATTCGATCTTGACGTTGA 112126
|||||||||||||||| || ||| || ||||| ||| | |||||| | ||||| ||
Sbjct 121 CAAAACCTGGTGCACAAACT--GGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGA 178
Query 112127 CTCAAATGGTAGATGGTCAGTTGAAAAATTCAAAGGACTATTATTCCAGATTGAGAGAGA 112186
|||||||| | |||||||| ||||||||||||||||| | ||||| ||||| | ||
Sbjct 179 TGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGA 238
Query 112187 CGCAAACGCAATCGCACAGGAAACTCGTAGAGGGAAGGGTAACATCATCATCACATCTGC 112246
|| ||| |||||| | ||||| | | || || |||||| | || ||| || |
Sbjct 239 TGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATC 298
Query 112247 TGATGTAGCTTCTGC 112261
||| |||||||||||
Sbjct 299 TGACGTAGCTTCTGC 313
>seq508167
Length=647
Score = 150 bits (166), Expect = 2e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 154869 TGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATA 154928
||||| ||||| || ||||||||||| |||||||| | ||||| | ||| | | ||
Sbjct 359 TGTATCATGATCACTTACCCATCTACGCATGGTGTTTATGAAAAAACGATTGCAGAAATT 418
Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988
||||| || ||||||||||||||||||| || || |||||||| || || | |||||
Sbjct 419 TGTAATATTATTCATGACAATGGTGGTCAAGTTTACCTTGATGGCGCGAACATGAATGCT 478
Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048
|| || ||| || || |||| | ||| || ||||| | |||||| ||||||||
Sbjct 479 CAAGTTGGAGTAACATCACCAGGCTTTATTGGCGCTGATGTTTCTCATCTTAACTTACAC 538
Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
||||| ||| ||||||||| || || || || || || | || ||||| || ||
Sbjct 539 AAAACCTTCGCTATTCCACACGGCGGCGGTGGACCAGGTATGGGACCTATTGGCGT 594
>seq515292
Length=303
Score = 129 bits (142), Expect = 7e-25
Identities = 175/244 (72%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 154862 ACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAG 154921
||| || ||| | ||| | ||||| ||||| ||||||||||| ||||||| | |||||
Sbjct 289 ACTTTCTTGTTTGATGGTCACATATCCATCAACACATGGTGTTTTTGAAAGTGCGATTAG 230
Query 154922 ACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCT 154981
| | || | ||| ||||||||||||||||| || ||| | || ||||| || |
Sbjct 229 AGAAATTACACAAATCATTCATGACAATGGTGGTTTAGTTTATATGGACGGAGCCAACAT 170
Query 154982 AAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAA 155041
||||| || || ||| || |||| ||| | ||| |||||||| || ||| | ||
Sbjct 169 GAATGCGCAAGTTGGATTAACAAATCCAGCTACAATTGGAGCAGATGTTTGCCATTTGAA 110
Query 155042 CTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGG 155101
|| || || |||||| ||||| || |||||||| || || || || || || || |
Sbjct 109 TTTGCACAAGACATTCGCAATTCCTCACGGAGGTGGTGGACCAGGTGTTGGACCAATTTG 50
Query 155102 TGTA 155105
||||
Sbjct 49 TGTA 46
>seq293205
Length=2462
Score = 102 bits (112), Expect = 9e-17
Identities = 320/490 (65%), Gaps = 17/490 (3%)
Strand=Plus/Plus
Query 154623 TCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCA 154682
||||| ||||||||| |||| | || ||||| || |||| || || || | |
Sbjct 1209 TCATTGCAACCTAACTCAGGTGCTCAAGGTGAATACGCAGCTTAATTGCCATTCGTAA-A 1267
Query 154683 TACCATCAAGGATCA---GGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCA 154739
||||| | || ||| || || | | | | || |||||||| || ||| || ||
Sbjct 1268 TACCA-CGAG--TCACGCGGCGACGCTCACCGTAACGTATGTTTAATTCCAAGCTCGGCG 1324
Query 154740 CATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGT 154799
||||| ||||| || || || ||||| | |||||| |||| | || | |||
Sbjct 1325 CATGGTACTAACCCAGCGTCGGCACAAATGGCCAGCATGAAAATTGTGGTGGTTGATTGT 1384
Query 154800 GATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAA----TAC 154855
||| | | |||||| ||||||| ||||| | ||||||| ||| ||
Sbjct 1385 GATAAAAACGGTAACGTAGACATGGCCGATCTTAAAGCGAAAGCA-----GAAGCGGTAG 1439
Query 154856 ATTTGAACTG-TCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTA 154914
|||| || ||||||||||| || |||||||||||||| || |||| ||| |
Sbjct 1440 CCGAAAACTTATCGTGTATTATGATCACTTACCCATCTACACACGGCGTATACGAAGAAA 1499
Query 154915 ACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAG 154974
||| | | || || | || ||||| | | || || || || || | || || |
Sbjct 1500 CAATTCGTGAAATTTGCGATATTATTCATCAGCACGGCGGCCAAGTTTACATGGACGGCG 1559
Query 154975 CAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTC 155034
|||| | || || || || || || | | ||| | ||| |||| |||| |
Sbjct 1560 CAAACATGAACGCGCAAGTTGGCGTAACTAGCCCAGGCTTTATTGGCTCAGACGTATCGC 1619
Query 155035 ATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTC 155094
| ||||||| |||||||| || ||||||||||| || || || || || || || || |
Sbjct 1620 ACTTAAACTTGCATAAAACCTTTTGTATTCCACACGGTGGCGGTGGCCCAGGTGTTGGCC 1679
Query 155095 CTATAGGTGT 155104
| || |||||
Sbjct 1680 CAATTGGTGT 1689
>seq522593
Length=217
Score = 98.7 bits (108), Expect = 1e-15
Identities = 133/181 (73%), Gaps = 7/181 (4%)
Strand=Plus/Plus
Query 154859 TGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAA---CTAA 154915
|||| | || ||| | ||| | || ||||||||||| |||||||| ||||||| |||
Sbjct 38 TGAATTATCTTGTTTAATGGTAACTTACCCATCTACTCATGGTGTTTTTGAAAGTGCTA- 96
Query 154916 CATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGC 154975
|||||| | || | | ||| | ||||||||||||||| || || | || || ||
Sbjct 97 -ATTAGAGAAATTACTCAAATCATACATGACAATGGTGGTTTAGTTTACATGGACGGTGC 155
Query 154976 AAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTA-TGGTGCAGATGTATGTC 155034
|| | |||||||| |||||| | |||| ||| | || || ||| |||||||| ||||
Sbjct 156 TAACATGAATGCACAAGTAGGATTGACAAATCCA-GCGACTATTGGCGCAGATGTTTGTC 214
Query 155035 A 155035
|
Sbjct 215 A 215
>seq409479
Length=405
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931
|| ||||| || ||||| |||||||| || || | ||| |||| | | |||||
Sbjct 3 ATCATGATCACCTACCCTTCTACACACGGCGTGTACGAAGAAGCCATTCAAGAAGTATGT 62
Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991
| || ||||| |||||| || || || || ||||| ||||| | ||||||||
Sbjct 63 GAATGGGTACATGAAGCTGGTGGCCAAGTTTACCTAGATGGCGCAAACATGAATGCACAA 122
Query 154992 GTAGGACTAGCAAAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAA 155050
||||| || ||| ||| | ||| || | ||||| | || || ||||| |||||
Sbjct 123 GTAGGTTTAACAACACCGGGCTT-TATCGGCTCTGATGTTTCACACCTTAACTTGCATAA 181
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||||||||||||| || || || || || || | || || || || ||
Sbjct 182 AACATTCTGTATTCCACACGGCGGCGGCGGCCCAGGTATGGGACCAATCGGCGT 235
>seq472080
Length=626
Score = 91.5 bits (100), Expect = 2e-13
Identities = 211/307 (69%), Gaps = 11/307 (4%)
Strand=Plus/Minus
Query 136516 GCTATACCAAGTATACTATCAGAAGCATTAGCAGTTACGTTTGACAATCATATTGGTCAT 136575
||||| || |||| || |||||||||| | || ||||| ||| |||| || |||
Sbjct 566 GCTATCCCTTCTATATTAGAAGAAGCATTAAATATCACTTTTGATAATGATATCGGACAT 507
Query 136576 GATTACCTT-GAGGATTACGAAGAAAGATACGACTTCTATCATACAAAAGAAGATAAAAT 136634
||||| || || |||| |||||| | | ||| | ||||||| || || | || |||
Sbjct 506 GATTATTTTCGAAGATTCTGAAGAACGCTTCGAATATTATCATAGAACGGATGTTAGAAT 447
Query 136635 TCCTTT-TGATCTAGAATTCTTTAATAAGATTACAAAAGGTGGTCTTCCTAACAAAACCC 136693
|| || | || || ||| | ||||| |||| || |||||| ||| ||| |
Sbjct 446 ACCATTCTTAT-TACAATCTATGAATAATGTTACTAATGGTGGTGCAATTAA-AAAGTCA 389
Query 136694 TTAAT-GTTGCTCTTGCAGGAACTGGTGTAGGTAAGTCTTTATTCATGTGT-CATTGT-- 136749
||| | || | |||| |||||||| ||||| || ||||||||| ||| ||
Sbjct 388 TTAGTAGTACCAGTTGCCCCTACTGGTGTTGGTAAATCATTATTCATGACAGCATGGTCA 329
Query 136750 GCTAGTTCTGTTTTATTACAAGGTAAAAATGTTTTATACATCACACTTGAAATGGCAGAG 136809
|| | |||| || | || ||| | ||||||||||| | ||| | |||||||| ||
Sbjct 328 GC-ATTTCTATTAAA--ACTTGGTTATAATGTTTTATATGTTACATTGGAAATGGCGGAA 272
Query 136810 Gaaaaaa 136816
|||||||
Sbjct 271 GAAAAAA 265
>seq95357
Length=3550
Score = 82.4 bits (90), Expect = 9e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944
||||| ||| ||| | | || || ||||| ||||||||||| ||| | |||||||||
Sbjct 2339 GGTAAGGAAGTGTACCGGCTTGCTCTGCAGACCAGAGAGCAGCACATCCGCAGAGACAAA 2398
Query 153945 GCAACCAGTAACATCTGCACAGCTCAGG 153972
|||||||| ||||||||||| || ||||
Sbjct 2399 GCAACCAGCAACATCTGCACTGCACAGG 2426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 575408081439680
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