Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq509954 145 9e-30 >seq509954 Length=433 Score = 145 bits (160), Expect = 9e-30 Identities = 241/348 (69%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 120008 TTGCTCAAGACTTGAAAGCAATTCATGGTCTTGATGCCGAGCAGGAGTTAGCAAACATTC 120067 ||||||| || ||||||| | ||||| | || || || | || | ||||| |||| Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 120068 TTTCAACTGAAATCCTTGCTGAAATCAACAGGGAAGTTGTTAGAACAATCTATGTTAACG 120127 ||||||||||||| ||||| ||||| ||| | || | || | || | |||| | | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 120128 CTGTTGCAGGTGCTCAAAACAACACTGCTAACGCAGGTATCTTCGACCTTGACGTTGACT 120187 | | ||||| |||| | || ||||| ||||||||||| | ||||| || Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 120188 CAAATGGTAGATGGTCTGTTGAGAAATTCAAAGGACTTCTGTTCCAGATTGAAAGAGACG 120247 |||||||| | ||||| || || ||||||||||||||| ||||||| |||||| | || | Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 120248 CAAACGCAATCGGTCATCAGACACGTCGCGGAAAGGGTAATATCATCATCGCATCTGCTG 120307 | ||| ||||| | | | || | || || || ||||| | || ||| || ||| Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 120308 ATGTTGTATCTGCTCTTGGTATGGCTGGCGTTCTTGATTACGCTCCTG 120355 | || | ||||| | | | ||||| | ||||||| ||| |||| Sbjct 301 ACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTG 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560733910128960