Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq509954 116 4e-21 >seq509954 Length=433 Score = 116 bits (128), Expect = 4e-21 Identities = 231/341 (68%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 114756 TGAAGGCGATTCATGGTCTGGATGCTGAGCAAGAGCTCGCTAACATTCTCAGCACTGAGA 114815 |||| || | ||||| |||| || || |||| || || || ||||| ||||| | Sbjct 13 TGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAA 72 Query 114816 TCCTGGCAGAAATCAACCGCGAAGTTGTTAGAACCATTTACACCAACGCTGTAAAG---G 114872 | || |||||||| ||||| || | || | ||| | || | | ||| ||| | Sbjct 73 TTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAA---CTGCAAAACCTG 129 Query 114873 GTGCTCAGAACAACACCGCAACTGCTGGTGTATTCGACCTCGACGTTGACTCCAACGGTC 114932 |||| || | | |||| |||||| | ||||| | ||||| || | || |||| Sbjct 130 GTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTC 189 Query 114933 GCTGGTCTGTTGAGAAGTTCAAGGGTCTCCTGTTCCAGATCGAAAGAGATGCTAACGCTA 114992 ||||||| || || || ||||| || || ||||||| || ||| | ||||||||| | Sbjct 190 GCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAA 249 Query 114993 TCGGTCAGCAAACTCGTCGCGGAAAGGGCAACATCCTGATCTGTTCTGCTGACGTTGCTT 115052 ||| | | |||| | || || || || ||| | | |||||||| ||||||| |||| Sbjct 250 TCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTT 309 Query 115053 CTGCACTCGGTATGGCAGGCGTTCTGGATTACTCCCCTGCT 115093 ||||| | | | || || | || |||| | | |||||| Sbjct 310 CTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556925492184800