Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq509954 152 8e-32 >seq509954 Length=433 Score = 152 bits (168), Expect = 8e-32 Identities = 250/357 (70%), Gaps = 5/357 (1%) Strand=Plus/Plus Query 128613 GAACTCGCAAACATTCTCTCTACTGAGATTCTTGCTGAGATCAACCGCGAAGTTATCCGT 128672 ||||| ||||| ||||| || ||||| |||||||| || || ||||| || | || ||| Sbjct 45 GAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGT 104 Query 128673 AC--TATCTACAAGGTCGCAGAACAAGGTGCAACAATCAACACTGCAACTGCTGGAACAT 128730 || ||| | ||| ||| ||| |||||| || | |||| ||||| | | Sbjct 105 ACCGTATATGCAACT--GCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCT 162 Query 128731 TCGACTTAGACACTGACTCCAACGGTCGTTGGTCAGTTGAGAAGTTCAAGGGACTTCTAT 128790 |||| |||||| || | || ||||| |||||||| || || ||||| |||||| | | Sbjct 163 TCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGT 222 Query 128791 TCCAGATCGAAAGAGATGCGAACCAAATCGCACAAAGAACTCGTCGCGGAAAGGGCAACG 128850 |||| || ||| | ||||| ||||||||||| || ||| | || || || || ||| Sbjct 223 TCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACT 282 Query 128851 TGGTTCTCTGCTCTGCCGACGTTGCTTCAGCTCTTACAATGGCTGGAATCCTTGATTACA 128910 | || |||| || | ||||| ||||| || | | |||||||||||||||| | Sbjct 283 TTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCG 342 Query 128911 CCCCTGCACTTAACGCTAA-CTTAAACGTTGACGACACTGGCAACACATTTGCTGGT 128966 | ||||| | || || || || || || || || || || |||||||||||| Sbjct 343 CACCTGCTATCTCTGCAAATCTACAAAGTAGATGATACCGGTAATACATTTGCTGGT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740187326612960