Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq509954 107 2e-18 >seq509954 Length=433 Score = 107 bits (118), Expect = 2e-18 Identities = 187/277 (68%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 118801 GAACTTGCTAACATCTTGTCTAGCGAAGTCCTTGCAGAAATCAACCGCGAAGTCGTCCGT 118860 |||||||| || || | || | ||| | ||||||||||| ||||| || | | ||| Sbjct 45 GAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGT 104 Query 118861 CGCGTATA--CAGCGTTGCTAAGCCTGGTGCTGCAANNNNNNNNNNNNNNNNNNNNATCT 118918 |||||| || | ||| || |||||||| || |||| Sbjct 105 ACCGTATATGCAAC--TGCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCT 162 Query 118919 TTGACCTCGACGTTGACAGCAATGGTCGTTGGTCCGTTGAGAAGTTCAAAGGACTTCTGT 118978 | || | ||||| || |||||||| ||||| || || || |||||||||||| ||| Sbjct 163 TCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGT 222 Query 118979 TCCAAATTGAGCGCGATTGTAACGCAATTGCACAAGACACTCGTCGTGGCAAAGGCAACT 119038 |||||||||| || ||| |||| ||| || |||| || | ||||| ||||| |||| Sbjct 223 TCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACT 282 Query 119039 TCCTCATCTGTTCTGCAGACGTTGCAAGTGCTTTGGC 119075 | | |||||||| | ||||| || ||| ||||| Sbjct 283 TTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGC 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607677906607600