Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 107 2e-18
>seq509954
Length=433
Score = 107 bits (118), Expect = 2e-18
Identities = 187/277 (68%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 118801 GAACTTGCTAACATCTTGTCTAGCGAAGTCCTTGCAGAAATCAACCGCGAAGTCGTCCGT 118860
|||||||| || || | || | ||| | ||||||||||| ||||| || | | |||
Sbjct 45 GAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGT 104
Query 118861 CGCGTATA--CAGCGTTGCTAAGCCTGGTGCTGCAANNNNNNNNNNNNNNNNNNNNATCT 118918
|||||| || | ||| || |||||||| || ||||
Sbjct 105 ACCGTATATGCAAC--TGCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCT 162
Query 118919 TTGACCTCGACGTTGACAGCAATGGTCGTTGGTCCGTTGAGAAGTTCAAAGGACTTCTGT 118978
| || | ||||| || |||||||| ||||| || || || |||||||||||| |||
Sbjct 163 TCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGT 222
Query 118979 TCCAAATTGAGCGCGATTGTAACGCAATTGCACAAGACACTCGTCGTGGCAAAGGCAACT 119038
|||||||||| || ||| |||| ||| || |||| || | ||||| ||||| ||||
Sbjct 223 TCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACT 282
Query 119039 TCCTCATCTGTTCTGCAGACGTTGCAAGTGCTTTGGC 119075
| | |||||||| | ||||| || ||| |||||
Sbjct 283 TTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGC 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 607677906607600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |