Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 150 2e-31
seq519289 98.7 1e-15
>seq509954
Length=433
Score = 150 bits (166), Expect = 2e-31
Identities = 221/313 (71%), Gaps = 0/313 (0%)
Strand=Plus/Plus
Query 116250 TTGCTCAGGACTTGAAAGCAATTCATGGTCTTGATGCCGAGCAAGAGCTAAGCAACATTC 116309
|||||||||| ||||||| | ||||| | || || || |||| || || ||||
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 116310 TCTCAACAGAGATCCTTGCTGAAATCAACAGAGAAGTTGTTAGAACTATCTACACAAACG 116369
| ||||| || || ||||| ||||| ||| | || | || | || | || ||| |
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120
Query 116370 CTGTTGCTGGTGCTCAAAACAATACTGCTACTGCTGGTATCTTCGACCTTGACGTTGACT 116429
| ||||||| |||| | | || | |||||||||||||| | ||||| ||
Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180
Query 116430 CAAATGGTAGATGGTCAGTTGAGAAATTCAAAGGACTTCTTTTCCAGATAGAAAGAGATG 116489
|||||||| | |||||||| || ||||||||||||||| | ||||| || ||| | ||||
Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240
Query 116490 CTAACGCTATCGGTCAGCAAACTCGTCGTGGGAAGGGCAACATCTTGATCTGCTCTGCAG 116549
||||| |||| | | |||| | ||||| || || ||| | | ||||| || | |
Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300
Query 116550 ACGTTGCTTCTGC 116562
|||| ||||||||
Sbjct 301 ACGTAGCTTCTGC 313
>seq519289
Length=421
Score = 98.7 bits (108), Expect = 1e-15
Identities = 85/104 (82%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 38513 AGGGATTACACCCTACACAGAAACCAGTAGGATTAATGGAGTATATGATTAAGACATACA 38572
|| |||||||||||||||| || ||||| | | | |||||| | ||||||||||||||||
Sbjct 341 AGAGATTACACCCTACACAAAAGCCAGTGGAACTCATGGAG-ACATGATTAAGACATACA 283
Query 38573 CTAATAAAGGTGAAACTGTTCTTGATAGTACTATGGGAAGTGGT 38616
|| || ||||||| ||||| || ||| || ||||| ||||||
Sbjct 282 CTGATGAAGGTGAGACTGTCCTAGATTTCACCATGGGTAGTGGT 239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579019402628800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |