Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015292.1
Length=84565
Score E
Sequences producing significant alignments: (Bits) Value
seq309203 127 1e-24
seq437693 98.7 5e-16
>seq309203
Length=1072
Score = 127 bits (140), Expect = 1e-24
Identities = 197/279 (71%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 50959 AGAAATGAGCCGTGGCACAACCGACCTGTTCATACACCCTTCTTAGGTGGTATCAACCAG 51018
|||||||| |||| || ||| ||||| | ||||| || | || | | | ||| |
Sbjct 756 AGAAATGAACCGTTCCATAACAGACCTATACATACTCCACTAGGAGATATTGTAAACAAC 815
Query 51019 CTTGGTAACGCAGCCGATGCTGAAGTTTGGTTCACAGATGCTTGTTATCTTCTGTACCGT 51078
|| ||||| || ||||||| ||| ||||||||| |||||| ||||||||||| |
Sbjct 816 CTAGGTAATGCTGCCGATGGTGAGGTTTGGTTCTTAGATGCGTGTTATCTTCTTTGGAAG 875
Query 51079 ATCACTGGTGAAGAGAAGTACAAAACTGCACTGGAAAGTGTATTCTTCACAGCGAACGAA 51138
||||| | || | ||||| | || | || |||||| | |||||| || ||
Sbjct 876 GCTACTGGCAAGGATCACTACAAGAAGGCTTTAGATAGTGTACATTACACAGCCAATGAG 935
Query 51139 TATACAGAGATTGACTCAACTGACAAGTTTTTCCGTCAAAGTC-TTTCTGCTGAGACACC 51197
|||||| |||||||| ||| | ||||| |||||| | || | | | ||| | |||||
Sbjct 936 TATACATTCATTGACTCTACTAATAAGTTCTTCCGT-AGAGACATGACAGCTAACACACC 994
Query 51198 TTTTACGGACGCTATCAGTTACGGGTTCTCATACCCTGC 51236
|||||| || | ||| ||||||| | ||| ||||| ||
Sbjct 995 TTTTACCGAAGGTATTAGTTACGACTACTCTTACCCCGC 1033
Score = 95.1 bits (104), Expect = 7e-15
Identities = 167/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 49825 TGGGATGCCTATATCAACTATTTCTACAAAGGTCAGGAAATCCCTTCCACACCATCTCGT 49884
||||| || ||| | || ||||| ||||| ||| || ||| |||||| |||
Sbjct 237 TGGGAGGCGTATGTACGCTGGTTCTATAAAGGACAGCCTATTCCTGACACACCTCAACGT 296
Query 49885 TACATCTGTAACTGGATTATCAACGGGAAACAACCTACTCTTGCAGATTATCCAGTAAAC 49944
| | |||||||||||||| || || || | ||| || ||| | |||||| | |||
Sbjct 297 TGGGTTTGTAACTGGATTATAAATGGTAAGGAGCCTGTACTGGCAAACTATCCACTCAAC 356
Query 49945 CCCGAAGAACCTACTCAGGGTGGATTCAAATGTGTACCTATCGAGTTCACTAACGGTGTT 50004
||| || |||||||| ||||| ||||| || |||| | | | |||||||| ||
Sbjct 357 CCCATTGACCCTACTCATGGTGGTTTCAAGGGTATACCACTAAACTGGACTAACGGACTT 416
Query 50005 GGTCGGATTCCTCACGGTGCTCCTTTTTGGGGTGAATATCTTGACTCTTG-TACGTTTGC 50063
|||||| | |||||||||| |||||||| ||| | || | | | ||| |||||
Sbjct 417 ACCAAAATTCCTAAGGGTGCTCCTTACTGGGGTGAGTATTTAGA-TGTAGCTACCTTTGC 475
Query 50064 T 50064
|
Sbjct 476 T 476
>seq437693
Length=1718
Score = 98.7 bits (108), Expect = 5e-16
Identities = 170/246 (69%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 50929 CCTGTTGATTTTGGTGGTTACGAGTTTGCAAGAAATGAGCCGTGGCACAACCGACCTGTT 50988
||||| || |||||||||| ||| ||||||||||| | || ||| |||| |
Sbjct 951 CCTGTAGAGCATGGTGGTTACATCATTGACAGAAATGAGCCATTCCATAACAGACCATTG 1010
Query 50989 CATACACCCTTCTTAGGTGGTATC---AACCAGCTTGGTAACGCAGCCGATGCTGAAGTT 51045
|| || ||||| ||||| || || | | |||||||| || |||| ||||||
Sbjct 1011 CACACTCCCTT---AGGTGAGATTGTGAATAACATGGGTAACGCTGCTGATGGTGAAGTA 1067
Query 51046 TGGTTCACAGATGCTTGTTATCTTCTGTACCGTATCACTGGTGAAGAGAAGTACAAAACT 51105
|||||| |||||||||||| | ||| | || ||| ||| |||||||| |
Sbjct 1068 TGGTTCTTAGATGCTTGTTACTTAATGTGGAAAGTTACCGGTAGAGAAAAGTACAAGAAG 1127
Query 51106 GCACTGGAAAGTGTATTCTTCACAGCGAACGAATATACAGAGATTGACTCAACTGACAAG 51165
||| |||| |||| || |||||||||||||| ||| || ||||| | | | ||
Sbjct 1128 GCATTGGACTGTGTTCATTTTACAGCGAACGAATACACATTCATCGACTCTAGTAATAAA 1187
Query 51166 TTTTTC 51171
||||||
Sbjct 1188 TTTTTC 1193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 268750875299972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |