Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015293.1
Length=30651
Score E
Sequences producing significant alignments: (Bits) Value
seq215494 587 1e-163
seq260826 340 3e-89
seq510320 221 2e-53
seq311730 161 2e-35
seq518294 134 3e-27
seq523693 131 3e-26
seq425038 114 3e-21
seq504560 93.3 8e-15
seq517135 86.0 1e-12
>seq215494
Length=798
Score = 587 bits (650), Expect = 1e-163
Identities = 609/798 (76%), Gaps = 2/798 (0%)
Strand=Plus/Plus
Query 13816 ATCGCCTTAGTAAATGAGGCAATGCGTGGCGACTTCAAAGAAGAAGCTATTTGGAATAAC 13875
||||| ||| | || || |||||| ||| ||||| ||||||||||| ||||||||||||
Sbjct 1 ATCGCTTTAATTAACGAAGCAATGGCTGGTGACTTTAAAGAAGAAGCAATTTGGAATAAC 60
Query 13876 GTCTCTGATGCACTTCGCGATGTAGACGCTTACGCGGCACAGGCTGCCGTTGCTGCAACT 13935
|| ||| | || | || ||||| || || ||||| | || || |||| ||||| |||
Sbjct 61 GTTTCTAACGCTTTGCGTGATGTTGATGCGTACGCAGTTCAAGCAACCGTAGCTGCTACT 120
Query 13936 GGTTTGTCTCAAGATCAAATCAATGACGTTAAAACAATGAAAGCGTTTGGCCCTATAAAA 13995
||||| || |||||||||||||| |||||||| || |||||||| |||||||| || |||
Sbjct 121 GGTTTATCGCAAGATCAAATCAACGACGTTAAGACCATGAAAGCATTTGGCCCAATCAAA 180
Query 13996 TGGGAGCCAAATCAGCTAGCTTGGATTGGTAAAAATCCGGGTGAGGCACTTAGCGTTATC 14055
||||| ||||| |||||| | |||||||| ||||| || || || || | |||||||||
Sbjct 181 TGGGAACCAAACCAGCTAACATGGATTGGCAAAAACCCTGGCGAAGCTATGAGCGTTATC 240
Query 14056 TCTGAGTCTTTATCAATGGCTATCATGCAAGATCAGGTTAACAAGGCTATCGGCGTGCTT 14115
||||| || |||||||||||||||||||||| || |||||||| ||||| || |||||
Sbjct 241 TCTGACTCGCTATCAATGGCTATCATGCAAGACCAAGTTAACAAAGCTATTGGTGTGCTG 300
Query 14116 GTAGCTGCTATCGGTAACGAGGCTAGTGCTAACATTGATGTTTCTGCNNNNNNNNGTGAT 14175
|| |||||| | ||||| ||||| | |||||| |||| || ||||| ||
Sbjct 301 GTTGCTGCTTTAGGTAATGAGGCAACGGCTAACCTTGACGTATCTGCCGAGCTTGCAGAA 360
Query 14176 TTAGGCGCAGTTACTCAAGTCAACTTAAACAAAACTCATGCGCTGTTTGGTGACTCATCA 14235
|||||||| |||||||| |||||||||||| | || || | | || ||| | ||
Sbjct 361 GCTGGCGCAGTAACTCAAGTTAACTTAAACAAAGCACACGCTTTATACGGCGACGCTTC- 419
Query 14236 ATGAATCTT-GGCACGCAAGTTATGACAGGCTCGACCGCCCACAAAATTCTAGGTCAAGC 14294
| | ||| | |||||||||||||| | || | || ||| | || || |||||
Sbjct 420 TGGTAGCTTAGAGTATCAAGTTATGACAGGTGCAACGTCTCATAAACTACTTGGCCAAGC 479
Query 14295 TCTAGTTAATGGCGCTCAGTTATTCAGTGAAGGTACTGTTAGAGTAATTGATATACTAGG 14354
| | ||||||||||| |||||||| || ||||| |||||| |||| |||||||| || ||
Sbjct 480 TTTGGTTAATGGCGCGCAGTTATTTAGCGAAGGCACTGTTCGAGTTATTGATATTCTTGG 539
Query 14355 TAAGCGATCTCTTATCACTGATAGCCCTGCGTTGGTTGCTGGTGGCAAGGAACGCGTATT 14414
|||| | || |||| ||||||||||||||||| |||||| | || || |||||| |
Sbjct 540 TAAGAAAACTGTTATTACTGATAGCCCTGCGTTAAGTGCTGGCAGTAAAGAGCGCGTACT 599
Query 14415 ATCACTATCACCAATGGCGGCAACTATCGCAGCAAACAATGATTTCCGCAGCGTTCTCGT 14474
||| ||| | | | || || ||||||||| | ||||||||||||||||||| ||||
Sbjct 600 ATCGCTAACTCAAGGTGCTGCTACTATCGCATCTAACAATGATTTCCGCAGCGCAATCGT 659
Query 14475 TGAGAGTACAGGAAATACGCGATTAGAGACAACTTACCAAGCCGAGTATACTGAAAACGT 14534
||| || || | || ||| | ||||| |||||||| || || || ||||||||
Sbjct 660 TGAAGGTGTTGGTAGCACACGACTTGAGACTGTATACCAAGCTGAATACACAGAAAACGT 719
Query 14535 TGGCGTTAAAGGCTACTCTTGGAACACCGCTGTCAAATCACCAGTCAAGTCACAGCTAGA 14594
|||||||| ||||| ||||| ||||| || |||||||| || || ||||||| ||
Sbjct 720 ATCAGTTAAAGGTTACTCGTGGAATACCGCAGTTAAATCACCTGTTAAAGCACAGCTTGA 779
Query 14595 AACTGGGACAAACTGGAC 14612
|||||| || ||||||||
Sbjct 780 AACTGGTACTAACTGGAC 797
>seq260826
Length=726
Score = 340 bits (376), Expect = 3e-89
Identities = 393/527 (75%), Gaps = 2/527 (0%)
Strand=Plus/Plus
Query 2355 GCTAGTTTAATTACTGTTTTTGCGTCACCTTCTGCAATGCCATTTTCGACCAGTACAGAT 2414
|| || || || || || ||||| ||| |||| |||||||||||| |||||| |
Sbjct 199 GCCAGCTTGATAACGGTCTTTGCATCATCTTCGCTAATGCCATTTTCAACCAGTGTGGCA 258
Query 2415 AGGATAGCATTGTTAATTTGCTTTTTATGCTCGGTATCAGCTTCACGCTTTAGCCTTACG 2474
|| || |||||||||| | | || ||| | |||||||| |||||||||||||| ||
Sbjct 259 AGTATTGCATTGTTAACTCTCGCCTTGTGCGCTGTATCAGCCTCACGCTTTAGCCTGTCG 318
Query 2475 TTTTCTTCTCGCTGCAATTGCGCTTGTCGTGCATTCTCAGCGTCAATAAGTGCTTGCTTT 2534
| ||||| ||||| || || |||||||||||||||||||| ||||| | |||||||||
Sbjct 319 TGCTCTTCACGCTGTAACTGTGCTTGTCGTGCATTCTCAGCATCAATTAACGCTTGCTTT 378
Query 2535 GCCGCTTGCTCAGCTATTTGTTTCTCGCGCTCTTCCTGCTGCTTACGCTCAGCTTCTCGT 2594
||||||||||| |||||||| || ||||||||| | ||||||| ||||| |||
Sbjct 379 GCCGCTTGCTCGGCTATTTGCTTTTCGCGCTCTGCTTGCTGCTGGCGCTCTTTTTCAGCA 438
Query 2595 TGCGCCTCACGCTCT-TTAGCTTCTAAATCCCATAGGCGATTCAATTTTAAAGCATCTTC 2653
| || || |||||| | || || | ||||| || ||| | || || || |||||
Sbjct 439 TTAGCTTCGCGCTCTAATTGC-TCGTATTCCCAAAGTTTATTAAGTTGCAACGCTTCTTC 497
Query 2654 GTGGTCACGCTCTACTTGCTCGGCCAATTCTTTTTCTGCCTGAATACGCTTTTCTTCATC 2713
||| ||||| || | ||| | | ||| |||| || || | ||||||||||||||
Sbjct 498 GTGATCACGTTCAATTTGTGCCTGTAGCTCTATTTCAGCTTGTAGGCGCTTTTCTTCATC 557
Query 2714 AAGAATGCGCTTGCGCCCTGCATTCCATTCATCAATCAAGGCAGTGAATGGGCTATTTGC 2773
|| | ||||||||| || ||||||| || ||||| || || || || | |||||
Sbjct 558 GAGTACACGCTTGCGCTCTACATTCCACTCGTCAATTAAAAGCGTAAACGGCTTGTTTGC 617
Query 2774 TTTTTCAAGGCGGGATTTAATCTCTTTAGCCTCAGCTTCAACTTGCGCTTTGTACTGCTT 2833
|||||||| || ||||| |||||||| || | |||||| |||||||| || |||||
Sbjct 618 GTTTTCAAGTCGATGCTTAATTTCTTTAGCTTCTGATTCAACCTGCGCTTTATATTGCTT 677
Query 2834 GGATAAATCAATACGCTTGCGGTCTAGCTTCTTAATTAGCTCATTAA 2880
|||| || |||||||||||||||||||| |||| || || ||||
Sbjct 678 TGATAGGTCGATACGCTTGCGGTCTAGCTTTTTAAGTAAGTCGTTAA 724
>seq510320
Length=522
Score = 221 bits (244), Expect = 2e-53
Identities = 311/428 (73%), Gaps = 23/428 (5%)
Strand=Plus/Plus
Query 13208 GCAGAAAAAGAGCGTCAAGCAGACTTGGAAGCTAAAGAGCTTGAGAGCAAAAAGAAAAAC 13267
|| ||||| ||| || |||| | ||||||||||||||||| |||||||||||||||
Sbjct 48 GCTGAAAACACGCGCAAATCAGAGCTTGAAGCTAAAGAGCTTGAAAGCAAAAAGAAAAAC 107
Query 13268 GGGCAGCATGAGGAAATTCTTGAGCACTTCAAGACTCAAGCCCAGCGCAAAGAAGAAG-- 13325
|| |||||||| ||||| || || || || || |||||||| | |||||| |||
Sbjct 108 GGCCAGCATGAAGAAATACTAGAACATTTTAAAACTCAAGCTGAA---AAAGAAAAAGCT 164
Query 13326 -AGCTTCAAGCTAAATTGGACGAGTTAAGCGGTAGCATTAAGCAGAAAGAAAAGACCGCA 13384
| | || | | | || ||||||| || || ||| | ||||||| |||
Sbjct 165 GAATTAAAATCACAGCTTGAAGAGTTAACAAACAGTGTTC-GCA--ATGAAAAGAAAGCA 221
Query 13385 ---GTAGTAAACGATTTGGCTTCAATGGGTACT---GATTCAACCCGCGCAGCATTAAAG 13438
||||| || || | || ||| |||| || ||| || |||||||||||||||
Sbjct 222 AGTGTAGTTAATGAGCTTGCATCATTGGGAACAACCGATACA---CGCGCAGCATTAAAG 278
Query 13439 CGCTTAATTGATCAAGATTTAGATTTTGGTGAGGATGGTAGCTTAGTTGTGCTTGAAAAT 13498
||| | |||||| ||||||| ||||| || ||||| |||||||||| | ||| ||
Sbjct 279 CGCCTGATTGATTTAGATTTAACGTTTGGCGAAGATGGCGGCTTAGTTGTTATCGAAGAT 338
Query 13499 GGCAAGGCAACAAGCATCAAC-CTCGATGAATACAAAGGTAAACTAAAAGAATTATACCC 13557
|| || ||| | |||| |||| |||| | ||||||| || |||||||||||||||||
Sbjct 339 GGTAAAGCATCTAGCA-CAACAGTCGAGCAGTACAAAGCCAAGCTAAAAGAATTATACCC 397
Query 13558 ATACCTAATCAGTGAGTCTCACGGTAAAGGTGGCG---GTAGAAGTGGCGCGCTAGGGTC 13614
|| || | |||||||||||||| |||||||||| ||||| ||| | | ||| ||
Sbjct 398 ATCTTTAGTAAGTGAGTCTCACGGCAAAGGTGGCGTTAGTAGAGGTGCGGGGTCAGGTTC 457
Query 13615 TGGCGGCA 13622
||||||||
Sbjct 458 TGGCGGCA 465
>seq311730
Length=9896
Score = 161 bits (178), Expect = 2e-35
Identities = 218/303 (72%), Gaps = 8/303 (3%)
Strand=Plus/Plus
Query 1979 CATTTGACCAGAAAAGCCATCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTG 2038
|||||| || | ||| || ||||| ||||||||||| ||||| |||||||| |||||| |
Sbjct 2687 CATTTGGCCGGTAAAACCGTCAACTACAATTTCAGTCGTGTATTTTTCTTGGCCTTGTGG 2746
Query 2039 GTCAGTCCATTTGCGGGTTTTTAACTTGCCTTCAATGTATAGCTTACTACCCTTACGTAC 2098
|||||||||||| || |||| | || ||||||| || | | ||| |||||
Sbjct 2747 GTCAGTCCATTTACGTGTTTGAAGTTTACCTTCAACATAAATTTGTGAACCTTTACGGCA 2806
Query 2099 ATACTCGCCGATTATTTCAGCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTC 2158
||| || || | ||||| |||||||| ||||||| || | | ||||||||| ||||
Sbjct 2807 ATATTCACCAACAATTTCTGCTAACTTGCCAAAAAATACCACACGGTGCCACTCAGTTTT 2866
Query 2159 TT----CTTTTGGCTCGCCAGTGCTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTA 2214
| | |||| ||||||| |||| || || | | || |||||||| || |
Sbjct 2867 ATCAACCATTTG----GCCAGTGTTTTTGTCTTTGTAGCTATCTGAAGTTGCTAAGGTGA 2922
Query 2215 GGTTTGCCACTGCATTTCCGTTAGGTATGTAACGAATTTCTGGATCTTGACCAGCATTAC 2274
||||| || | || |||||||| || ||||| | ||| |||||||| || |||||
Sbjct 2923 TATTTGCTACACCGTTGCCGTTAGGCATATAACGTACTTCAGGATCTTGTCCTAAATTAC 2982
Query 2275 CAA 2277
|||
Sbjct 2983 CAA 2985
>seq518294
Length=326
Score = 134 bits (148), Expect = 3e-27
Identities = 138/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 3057 TTATTTGATCTGCAACTTGGTTAGATACCGCAAAACCATTTGCTTTTAATTCGCCGATAA 3116
|||||||||| ||||| |||||||| || | ||||||| || ||||||||||| ||||
Sbjct 4 TTATTTGATCGGCAACCTGGTTAGACACTGTAAAACCACCCGCCTTTAATTCGCCAATAA 63
Query 3117 TCATATCAGCCGTTTTTGCACCACTTTGAATATCAACTAACATAAACTGCTTGTCGTTTT 3176
||||||| || ||||| ||||| ||||||||||| || | ||| ||||||| || |
Sbjct 64 TCATATCCGCAGTTTTAGCACCGCTTTGAATATCTACCAGCATGTACTGCTTATCAGCCT 123
Query 3177 CAAAGTTGTTGTACCAGTTAGCGTT-TTTGCTTG--ACTGCTTAGCAGGCGCTTTTTG 3231
| || ||||||||| || | || | ||||| |||||| || |||||||||||
Sbjct 124 CGAAAGAGTTGTACCAATTCACATTACTAGCTTGCTTCTGCTTTGCTGGCGCTTTTTG 181
>seq523693
Length=695
Score = 131 bits (144), Expect = 3e-26
Identities = 215/300 (72%), Gaps = 9/300 (3%)
Strand=Plus/Minus
Query 1997 ATCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGT 2056
||| || ||||||||||| |||||||| ||||| || |||||| |||| || || ||
Sbjct 376 ATCGACGACAATTTCAGTTGTGTACTTGTCTTGGCCGCTTTGGTCTTTCCACTTACGTGT 317
Query 2057 TTTTAACTTGCCTTCAATGTATAGCTTACTACCCTT-ACGTACATACTC-GCCGATTATT 2114
| || || ||||||| ||| | ||| | | |||| ||| | ||||| |||| | |||
Sbjct 316 CTGCAATTTACCTTCAAGGTAAA-CTTGCGAACCTTTACGCAGGTACTCAGCCG-TGATT 259
Query 2115 TCAGCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCA 2174
||||||||||| || || | || | | |||||||||||| ||||| | | | | |
Sbjct 258 TCAGCTAACTTGCCGAACATCACCACGCGGTGCCACTCGGTACGTTCTTGTTG-TTGACC 200
Query 2175 GTGCTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCG 2234
|| || || ||||| |||||| || || || || | || ||||| ||||| ||
Sbjct 199 CTG--TTGGTCTTTCCAAGATTCGCTGGTAGCAAGGGTAATATTGGCCACGGCATTGCCA 142
Query 2235 TTAGGTATGTAACGAATTTCTGGATCTTGACCAGCATTACC-AATAATTTGAACCTTGTT 2293
|| || || ||||| | ||| |||||||| || ||| || | |||| || || |||||
Sbjct 141 TTTGGCATATAACGCACTTCGGGATCTTGGCCTAAATTGCCGACTAATATG-ACTTTGTT 83
>seq425038
Length=775
Score = 114 bits (126), Expect = 3e-21
Identities = 227/330 (69%), Gaps = 11/330 (3%)
Strand=Plus/Plus
Query 21496 GCACAGCAAGGTGTTATAGCCATCGCCCAGAGAGCTTCCACAGATATCGAAGGTGTTGCA 21555
|| ||||| ||||| || | || ||||| |||| | ||||| ||||| ||
Sbjct 433 GCGCAGCAGGGTGTCATTTCAATAGCCCAACAAGCTGGCGTTGATATTAGCGGTGTGGCT 492
Query 21556 ACGGCTTATTCAAG-ATTGTCGCAAGCGACTACTGATTTGAACTTGAGTCAAGAACAACT 21614
||||| || | |||| | ||| | ||| |||| ||| | ||||| || | |
Sbjct 493 GATGCTTACTCTCGTATTG-CTCAATCAACTTCTGAGTTGGGGATTAGTCAGGAGCGTAT 551
Query 21615 GCTAGACGTAACGAACAAGTTAACGCTTGCTTTAAAAGCTGGTGGGGCAACAG---CGGA 21671
|||| || || | || ||||||||| ||||| ||||||||||| |||| | ||
Sbjct 552 CTTAGATGTGACCAGGAAAACAACGCTTGCATTAAAGGCTGGTGGGGCTACAGGATCTGA 611
Query 21672 AGAAACTAGCTCTGTTATGATTCAGCTTGCGCAAGGTTTAGGTTCTGGCGCTTTGCAGGG 21731
| | | ||| |||||||||||||||| |||| | | ||||| || || ||||||||
Sbjct 612 AACATCAAGC---GTTATGATTCAGCTTGGCCAAGCTCTTGGTTCAGGTGCGTTGCAGGG 668
Query 21732 TGACGAATTAAGATCAATTCTAGAATCATCAATCCCAATCAGCAAAGCATTAGCGAAAGA 21791
||| || | |||||||| || ||| |||| || || || | || || |||| || ||
Sbjct 669 TGATGAGCTTAGATCAATACTTGAAGCATCTATACCTATAACGAAGGCTCTAGCAAAGGA 728
Query 21792 ATTCAACAC--CAACGTTGGCAGCCTAAAA 21819
|| ||| | | || | |||||| |||||
Sbjct 729 GTTTAACGCTACTAC-TGGGCAGCTTAAAA 757
>seq504560
Length=789
Score = 93.3 bits (102), Expect = 8e-15
Identities = 95/123 (77%), Gaps = 1/123 (1%)
Strand=Plus/Minus
Query 9510 AATTAA-AGGAGAAAGAAATGAGATTTAAATTCAATGTTGATGTGTATGACTTTAAAGTT 9568
|||||| ||||||| ||| |||||||||||||||||||||| || || || || | ||
Sbjct 123 AATTAACAGGAGAATGAAGTGAGATTTAAATTCAATGTTGACGTTTACGATTTCAGCGTG 64
Query 9569 ACATTTACCGATGAAAAGGATTATGCAGATAGGGCCACTAACAATGGAAGTGGTGTAGAT 9628
|| || || ||| |||| |||||||| |||| ||| | || |||| || | |||||
Sbjct 63 ACGTTCACAACTGATAAGGCGTATGCAGACAGGGTAACTGAAAACGGAACTGATATAGAT 4
Query 9629 TAT 9631
|||
Sbjct 3 TAT 1
>seq517135
Length=240
Score = 86.0 bits (94), Expect = 1e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 1961 TTTACTATCAAGCATAATCATTTGACCAGAAAAGCCATCAACAACAATTTCAGTGGTGTA 2020
||||| ||| | ||| |||| ||| ||| || | | ||| ||||||||||| ||
Sbjct 48 TTTACCATCTAACATTTGCATTACACCGTTAAAACCTTGTAAAACGATTTCAGTGGTATA 107
Query 2021 CTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTTAACTTGCCTTCAATGTATAG 2080
| |||||||||||||| | ||||| ||||| |||| || |||||||| ||||
Sbjct 108 TTGGTCTTGACCTTGTTGATTGGTCCACTTGCGTGTTTGCAAAGAGCCTTCAAGATATAC 167
Query 2081 CTTACTACCCTTACGTACATACTCGCCGATTATTTCAGCTAACTTTCCAAAAACAACAAT 2140
|| |||||| || ||| || || |||||||| | ||| ||||| | |||||
Sbjct 168 TTTTGAACCCTTTTTTAAATATTCACCCGCAATTTCAGCAAGCTTGCCAAACATAACAAC 227
Query 2141 TCTGTGCCACTC 2152
| ||||| ||
Sbjct 228 ACGATGCCATTC 239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97350286676412
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