Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015296.1 Length=157061 Score E Sequences producing significant alignments: (Bits) Value seq520838 95.1 1e-14 seq451005 86.0 6e-12 seq513135 84.2 2e-11 >seq520838 Length=421 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/226 (70%), Gaps = 12/226 (5%) Strand=Plus/Plus Query 85367 GTTGTCGAGAACCCCAGACCAGACAGTTGGTTTTCGTTGGGCTGTACTTTCATTTTACTA 85426 |||| ||||| || |||||| || || || | | | || |||| |||| || Sbjct 152 GTTGAAGAGAAACCAAGACCACTTAGCTGATTAACATCAGATGGTGCTTTAGTTTTGCTT 211 Query 85427 CCCAGCATTTCAAAAACCTTACGATGTTTATCCAGT---TCCGGCTTCAGATATTCATTG 85483 | | || ||| || || |||||||| | || || ||| || ||| | |||||| Sbjct 212 GCTAACACTTCGAACACTTTACGATGCTCATTCAACGAATCCA--TTAAGA-ACTCATTG 268 Query 85484 TAGAAACCACGAGTACCTTCAGGATTCGCACAACCTTCCAAGATGAAGAAGACGTGCTTG 85543 ||||| ||||| | | ||| || || ||||||| || || |||||||| | |||||| Sbjct 269 TAGAATCCACGCGCAGGTTCTGGGTTAACACAACCCTCTAACATGAAGAACAAATGCTTG 328 Query 85544 TTGCC---AGTTTGTTCACCATCCCAATGGTTTGGTGAGTTCAGGA 85586 || || |||||| |||| ||||||||||||||||||||| || Sbjct 329 TTACCAAGAGTTTGATCAC---CCCAATGGTTTGGTGAGTTCATGA 371 >seq451005 Length=948 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 137229 TTGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 137288 ||| | |||||||||| |||| ||||||| |||||||||||||| ||| |||||||||| Sbjct 143 TTGCCTCCGTAGCTCAATGGT-AGAGCAGGCGACTCATAATCGACAGGTTGCTGGTTCAA 85 Query 137289 GTCCAGCC-AGGGTCACCAAATAT 137311 |||||||| | | ||||||| || Sbjct 84 GTCCAGCCGTGAGGCACCAAACAT 61 >seq513135 Length=367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 54486 GGATACATAATCAACAATACTTTTGGCTGTAGCATTGATTGAGTCCAAAGTGTCACCGGT 54545 ||||||||| | ||| ||| || ||||||||||||||| || ||| |||| || Sbjct 367 GGATACATACTTAACGATAGAGCTGCATGTAGCATTGATTGAATCTAAACTGTCGTTGGA 308 Query 54546 TTTGATAAGAACACAAGAACTGAATTGGCGGGTTGGGGTACGAACGCCGGACATGATGGG 54605 | |||| ||||||||||| ||||| || || || || | ||| || ||||| || || Sbjct 307 CTCAATAACCACACAAGAACTAAATTGTCGTGTAGGTGTTCTAACCCCAGACATAATAGG 248 Query 54606 TGTTGGAAG 54614 |||||| || Sbjct 247 TGTTGGTAG 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499166606018320