Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015296.1
Length=157061
Score E
Sequences producing significant alignments: (Bits) Value
seq520838 95.1 1e-14
seq451005 86.0 6e-12
seq513135 84.2 2e-11
>seq520838
Length=421
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/226 (70%), Gaps = 12/226 (5%)
Strand=Plus/Plus
Query 85367 GTTGTCGAGAACCCCAGACCAGACAGTTGGTTTTCGTTGGGCTGTACTTTCATTTTACTA 85426
|||| ||||| || |||||| || || || | | | || |||| |||| ||
Sbjct 152 GTTGAAGAGAAACCAAGACCACTTAGCTGATTAACATCAGATGGTGCTTTAGTTTTGCTT 211
Query 85427 CCCAGCATTTCAAAAACCTTACGATGTTTATCCAGT---TCCGGCTTCAGATATTCATTG 85483
| | || ||| || || |||||||| | || || ||| || ||| | ||||||
Sbjct 212 GCTAACACTTCGAACACTTTACGATGCTCATTCAACGAATCCA--TTAAGA-ACTCATTG 268
Query 85484 TAGAAACCACGAGTACCTTCAGGATTCGCACAACCTTCCAAGATGAAGAAGACGTGCTTG 85543
||||| ||||| | | ||| || || ||||||| || || |||||||| | ||||||
Sbjct 269 TAGAATCCACGCGCAGGTTCTGGGTTAACACAACCCTCTAACATGAAGAACAAATGCTTG 328
Query 85544 TTGCC---AGTTTGTTCACCATCCCAATGGTTTGGTGAGTTCAGGA 85586
|| || |||||| |||| ||||||||||||||||||||| ||
Sbjct 329 TTACCAAGAGTTTGATCAC---CCCAATGGTTTGGTGAGTTCATGA 371
>seq451005
Length=948
Score = 86.0 bits (94), Expect = 6e-12
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 137229 TTGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 137288
||| | |||||||||| |||| ||||||| |||||||||||||| ||| ||||||||||
Sbjct 143 TTGCCTCCGTAGCTCAATGGT-AGAGCAGGCGACTCATAATCGACAGGTTGCTGGTTCAA 85
Query 137289 GTCCAGCC-AGGGTCACCAAATAT 137311
|||||||| | | ||||||| ||
Sbjct 84 GTCCAGCCGTGAGGCACCAAACAT 61
>seq513135
Length=367
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 54486 GGATACATAATCAACAATACTTTTGGCTGTAGCATTGATTGAGTCCAAAGTGTCACCGGT 54545
||||||||| | ||| ||| || ||||||||||||||| || ||| |||| ||
Sbjct 367 GGATACATACTTAACGATAGAGCTGCATGTAGCATTGATTGAATCTAAACTGTCGTTGGA 308
Query 54546 TTTGATAAGAACACAAGAACTGAATTGGCGGGTTGGGGTACGAACGCCGGACATGATGGG 54605
| |||| ||||||||||| ||||| || || || || | ||| || ||||| || ||
Sbjct 307 CTCAATAACCACACAAGAACTAAATTGTCGTGTAGGTGTTCTAACCCCAGACATAATAGG 248
Query 54606 TGTTGGAAG 54614
|||||| ||
Sbjct 247 TGTTGGTAG 239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499166606018320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |