Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq152718 116 8e-21
seq152719 113 1e-19
seq6427 111 3e-19
>seq152718
Length=3078
Score = 116 bits (128), Expect = 8e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | ||| ||||| || || ||||||||||| || || |||| |||| |||||
Sbjct 2152 TCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGAGAGAGT 2211
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || || ||||| || | | || || | ||| |||||
Sbjct 2212 GCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGGGATGCC 2271
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || ||||| || ||||| |||||||||||||| ||| || || ||
Sbjct 2272 TTCCTTATCCTGAATCTTAACTTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAG 2331
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || |||| || || || || | |||||
Sbjct 2332 AGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373
>seq152719
Length=2073
Score = 113 bits (124), Expect = 1e-19
Identities = 122/162 (75%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | ||| || || |||| ||||||||| || || ||||| |||| |||||
Sbjct 277 TCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGT 336
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || ||||| |||||||| || || ||||| || | || ||||||||||| |||||
Sbjct 337 GCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCC 396
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
||| || || || || || ||||| ||||||||||||||
Sbjct 397 TTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTC 438
Score = 107 bits (118), Expect = 4e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || ||||||||||| || || ||||| |||| ||||| | || |||||
Sbjct 62 ACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCC 121
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || || ||||| ||||| || || || ||
Sbjct 122 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGG 181
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| || ||||| ||||||||||||||
Sbjct 182 ATCTTAGCTTTGACATTCTCAATGGTGTC 210
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || | ||||| ||||| || || || ||||| | | || | ||||||||
Sbjct 518 ACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGACATGGTGCGACCATCTTCC 577
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || || ||||| ||||| || || || ||
Sbjct 578 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGG 637
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || || || |||||||||||||| ||| || || || || | |||||
Sbjct 638 ATCTTAGCTTTTACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGTCTTA 697
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || || || | |||||
Sbjct 698 CCAGTCAGGGTCTTCACAAAGATCTGCAT 726
>seq6427
Length=3314
Score = 111 bits (122), Expect = 3e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || |||||||| || || || ||||| |||| || || | ||||||||
Sbjct 3126 ACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 3185
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || || ||||| ||||||||||| ||||| ||
Sbjct 3186 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 3245
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| || |||||| || || ||||||||
Sbjct 3246 ATCTTGGCCTTGACATTTTCGATGGTGTC 3274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102011466628034
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |