Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015457.1 Length=165919 Score E Sequences producing significant alignments: (Bits) Value seq449735 194 2e-44 seq506238 138 1e-27 seq509673 114 1e-20 seq351952 102 9e-17 seq487923 98.7 1e-15 seq326422 87.8 2e-12 >seq449735 Length=3187 Score = 194 bits (214), Expect = 2e-44 Identities = 406/595 (68%), Gaps = 19/595 (3%) Strand=Plus/Minus Query 137826 AACAGTTCACGGGCTTTAATACGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCGGCTT 137883 ||||||||| |||||||| || ||||||||||| ||| | |||| ||| || Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTAT--TT 556 Query 137884 CATATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGCTCACCACC 137941 | |||| | || |||| ||||||||||| |||| | | || ||||| || Sbjct 555 TACATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGG 499 Query 137942 CATTTCATGTGGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAG 138001 || ||| || || ||||| ||||||||||||| || ||||| |||||| Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439 Query 138002 GTCATTCAGTTGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTT 138061 | ||| | || ||||| ||||| | |||||| | ||||| || || || || ||| Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379 Query 138062 ATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 138119 |||||| | || | || ||||| ||||| |||||||||| || || | ||| || Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321 Query 138120 GCAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTC 138179 || ||||||||||| | || || || || || |||||| || || ||||| || || Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261 Query 138180 CAAAAAGGAATAACACCAGTATG--ACGTACTTCACCTGTACCAATCTTAGAACCTTCGG 138237 ||||||||||| ||| ||||| ||| |||| || | | ||| | ||| | Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTG 203 Query 138238 CACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTG 138297 ||||||| ||| ||||||| ||||| || || |||| || | |||| |||||||| Sbjct 202 CACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG 143 Query 138298 AAGCAGAAGCTTTGTTAATAGACTTCAGCGAATCACCTGCTTCAATAACAACGCATGAAC 138357 || || | |||||| || | || || || || || | || || || | Sbjct 142 CAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGC 83 Query 138358 TAAACTGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAAT 138412 ||||||| || ||||| |||||| || |||||||| || || |||| |||||| Sbjct 82 TAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 >seq506238 Length=275 Score = 138 bits (152), Expect = 1e-27 Identities = 141/184 (77%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 59800 ATTACAGGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 59859 |||||| | || ||||| ||||| | | ||||| |||| ||||| || || | | Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97 Query 59860 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 59919 ||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || | Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157 Query 59920 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCAC 59979 | ||||| |||||||||| ||||||||||| | || || ||||| | |||||||||| Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217 Query 59980 CTTC 59983 |||| Sbjct 218 CTTC 221 >seq509673 Length=441 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 138012 TGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138071 || ||||| |||||||||||||| | |||||| ||||| ||||| ||||||||||| Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287 Query 138072 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138131 || | | |||||||| |||||||| | || ||| | || || || |||||| Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347 Query 138132 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138191 || | || || |||||||| ||||||||||||| || || |||| | || || ||| Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407 Query 138192 ACACCAGTATG 138202 ||| ||||| Sbjct 408 CAACCCGTATG 418 >seq351952 Length=416 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 59801 TTACAGGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 59860 ||| || || | ||||||||||| | ||| || || ||| ||||| | ||| | || Sbjct 21 TTATAGCGTCGCTGTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGA 80 Query 59861 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 59920 |||||| || ||||| ||||| |||||||| || || | || ||||| || || |||| Sbjct 81 GTTAAATCGTACTGCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATT 140 Query 59921 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACC 59980 | | |||||| | ||||||| || || || ||||| | |||||||||||| Sbjct 141 TTCCATTGCATCCAATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACC 200 Query 59981 TTCAAT 59986 |||||| Sbjct 201 TTCAAT 206 >seq487923 Length=1072 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 23699 ATACTAATTTATCTAGTACATATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 23758 ||| |||||||| || |||| || |||||||| ||||||||| |||||||| || Sbjct 528 ATAGTAATTTATATA---CATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472 Query 23759 CGTCATTTGAACGCATGTTAACCAC-TGCATTAATTTTCTTATCACGAATCAGGTACT-G 23816 ||||| ||| ||| || || | | |||||||| ||||||||||| | |||| | Sbjct 471 CGTCACATGAGCGCTGATTGACAATATAGATTAATTTA-TTATCACGAATAAA-TACTTG 414 Query 23817 TACTGTATTAGTACACATGAAATCCGACATGCCATCTTTATTGTAGTCAAACTGCATGGA 23876 || |||||||||| || ||||| ||||| ||| |||| | ||| || || || Sbjct 413 AACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAGA 354 Query 23877 TGGACGAGTATAAATCATGAT 23897 || | |||||||||||| || Sbjct 353 AGGTCTAGTATAAATCATAAT 333 >seq326422 Length=2068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/114 (79%), Gaps = 4/114 (4%) Strand=Plus/Plus Query 68527 CGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATCG 68584 ||||||||||| |||||||| | | | | |||| |||||||| | | |||||| Sbjct 292 CGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATCG 350 Query 68585 AACTCACATCATCAGATTGGAAGTCTGAGGTAAT-GCCATTATACGATATCCGC 68637 ||| | ||||||||| ||||||| |||||||||| ||||||||||||| |||| Sbjct 351 AACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527326010149680