Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq509954 132 5e-26 seq509355 95.1 1e-14 >seq509954 Length=433 Score = 132 bits (146), Expect = 5e-26 Identities = 246/356 (69%), Gaps = 5/356 (1%) Strand=Plus/Plus Query 49956 GATGCTGAAGCAGAATTGGCTAACATTCTGTCTTCCGAAATCCTTGCAGAAATCAACCGT 50015 || || |||| |||| | || || ||||| || | ||||| ||||||||||| |||||| Sbjct 33 GACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGT 92 Query 50016 GAAATCATTCGTACCGTTTACCGTACTGCGGTTCCTGGTGCTCAGAACAACGTT--GTAA 50073 || | ||||||||||| || ||||| |||||||| || ||| ||| | || Sbjct 93 GAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACA-AAC-TGGTTCAGCAA 150 Query 50074 CTGCTGGTACTTTCGACCTCGATACTGACTCCAACGGTCGTTGGGCTGTTGAGAAGTTCA 50133 ||||||| ||||| | || || | || ||||| ||| | || || || |||| Sbjct 151 ACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCA 210 Query 50134 AAGGACTTCTATTCCAAATCGAAAGAGACTTGAACGCTATCGGACAACAAACTCGTCGTA 50193 |||||||| | |||||||| ||| | || ||| |||| || |||| | ||| Sbjct 211 AAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTG 270 Query 50194 ACAAGGGTAATCTTATCATCTGTTCTGCAGACGTTGCTTCTGCTCTAACCATGGCAGGTG 50253 || ||||| |||| |||||||| | ||||| |||||||| | | || || Sbjct 271 GTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAA 330 Query 50254 TTCTTGATTACACTCCAGCTCTAAATGCAAACCT-CGATGTTGATGACACCGGTAA 50308 | ||||||| | | || ||| | |||||| || | | || ||||| |||||||| Sbjct 331 TCCTTGATTTCGCACCTGCTATCTCTGCAAATCTACAAAGTAGATGATACCGGTAA 386 >seq509355 Length=474 Score = 95.1 bits (104), Expect = 1e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 149444 ATATTGCGGGATAGAGCAGTCTGGTA-GCTCATCAGTCTCATAAGCTGAAGATCGGTGGT 149502 || ||||||||||||||||||||||| |||| | || |||||||||| ||| ||| |||| Sbjct 286 ATTTTGCGGGATAGAGCAGTCTGGTAAGCTCGTTAGCCTCATAAGCTAAAGGTCGCTGGT 345 Query 149503 TCAAATCCACCTCCCGC 149519 ||||||||| ||||||| Sbjct 346 TCAAATCCAGCTCCCGC 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567521032258160