Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 132 5e-26
seq509355 95.1 1e-14
>seq509954
Length=433
Score = 132 bits (146), Expect = 5e-26
Identities = 246/356 (69%), Gaps = 5/356 (1%)
Strand=Plus/Plus
Query 49956 GATGCTGAAGCAGAATTGGCTAACATTCTGTCTTCCGAAATCCTTGCAGAAATCAACCGT 50015
|| || |||| |||| | || || ||||| || | ||||| ||||||||||| ||||||
Sbjct 33 GACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGT 92
Query 50016 GAAATCATTCGTACCGTTTACCGTACTGCGGTTCCTGGTGCTCAGAACAACGTT--GTAA 50073
|| | ||||||||||| || ||||| |||||||| || ||| ||| | ||
Sbjct 93 GAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACA-AAC-TGGTTCAGCAA 150
Query 50074 CTGCTGGTACTTTCGACCTCGATACTGACTCCAACGGTCGTTGGGCTGTTGAGAAGTTCA 50133
||||||| ||||| | || || | || ||||| ||| | || || || ||||
Sbjct 151 ACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCA 210
Query 50134 AAGGACTTCTATTCCAAATCGAAAGAGACTTGAACGCTATCGGACAACAAACTCGTCGTA 50193
|||||||| | |||||||| ||| | || ||| |||| || |||| | |||
Sbjct 211 AAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTG 270
Query 50194 ACAAGGGTAATCTTATCATCTGTTCTGCAGACGTTGCTTCTGCTCTAACCATGGCAGGTG 50253
|| ||||| |||| |||||||| | ||||| |||||||| | | || ||
Sbjct 271 GTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAA 330
Query 50254 TTCTTGATTACACTCCAGCTCTAAATGCAAACCT-CGATGTTGATGACACCGGTAA 50308
| ||||||| | | || ||| | |||||| || | | || ||||| ||||||||
Sbjct 331 TCCTTGATTTCGCACCTGCTATCTCTGCAAATCTACAAAGTAGATGATACCGGTAA 386
>seq509355
Length=474
Score = 95.1 bits (104), Expect = 1e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 149444 ATATTGCGGGATAGAGCAGTCTGGTA-GCTCATCAGTCTCATAAGCTGAAGATCGGTGGT 149502
|| ||||||||||||||||||||||| |||| | || |||||||||| ||| ||| ||||
Sbjct 286 ATTTTGCGGGATAGAGCAGTCTGGTAAGCTCGTTAGCCTCATAAGCTAAAGGTCGCTGGT 345
Query 149503 TCAAATCCACCTCCCGC 149519
||||||||| |||||||
Sbjct 346 TCAAATCCAGCTCCCGC 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567521032258160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |