Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015719.1 Length=40940 Score E Sequences producing significant alignments: (Bits) Value seq512931 143 7e-30 >seq512931 Length=538 Score = 143 bits (158), Expect = 7e-30 Identities = 347/520 (67%), Gaps = 34/520 (7%) Strand=Plus/Plus Query 38614 CCAGACCACAGCCCGTCAGTTAAGTCTGTAGGTATTACGGGTCAGCTTACTGGTAGCCGT 38673 || ||||||||||| || || ||||| || ||| |||| || | |||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 38674 GCCGATATCATCATTGCAGATGACGTGGAGATTCCCGGTAACTCTGCAACTCAAGGTTCT 38733 || || ||| ||||||| |||||||| ||| | ||||| ||||||| || || || | Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTCCG 127 Query 38734 C--GTGAGAAACTCTGGACGTTGGTTCAGGAGTTCGCCGCGCTGTTGAAACCTCTACCGA 38791 | | || | || | | |||| |||| |||| ||| | |||| ||| || Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GA 182 Query 38792 CTAGCCGTGTTATCTATCTGGGTACCCCTCAGACCGAGATGACGCTCTACAAGGAACTTG 38851 | || | ||||| |||| ||||| |||||||| ||||| ||||||| |||||||| Sbjct 183 CGGTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 38852 AGGACAACCGTGGTTACTCTACAATTATCTGGCCAGCACAGTATCCTCGCTCCAAAGAGG 38911 ||| |||| || ||||| || | |||||||| |||| || ||||| | | || Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGG 295 Query 38912 AAGACCT---GTACTA-TGGCGACCGACTGG--------CTCCTATGCTCCGTAGCGAGT 38959 ||||| || ||| |||| | | || | | | || || || | | Sbjct 296 CTGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC 355 Query 38960 ACGATGAG------GACAAAGAGGGTCTCGCCAGTCAGCCAACAGACCCGGTGCGGTTCG 39013 | | ||| ||| | ||| || | | |||| |||||||| | || |||| Sbjct 356 TCAAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCG 415 Query 39014 ACTCTATGGACCTTCAGGAGCGTGAGGTGGAGTACGGCAAGGCTGGCTATACGCTTCAGT 39073 | | ||||| | ||||| || | || ||||||| ||||| | || |||| Sbjct 416 ATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGT 475 Query 39074 TCATGCTCAACCCAAACCTCAGTGACGCCGAGAAGTACCC 39113 ||||||||||||| ||||| || ||| |||||||||||| Sbjct 476 TCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130069624853448