Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_015938.1
Length=89916
Score E
Sequences producing significant alignments: (Bits) Value
seq309203 125 4e-24
>seq309203
Length=1072
Score = 125 bits (138), Expect = 4e-24
Identities = 328/491 (67%), Gaps = 12/491 (2%)
Strand=Plus/Plus
Query 13694 TGTAACTGGTTGGTTAACGGTAAAGAACCTGTTCTTGCCAACTGGCCTCTTGCAACAG-A 13752
||||||||| | | || ||||| || ||||| || || |||| || || |||| |
Sbjct 303 TGTAACTGGATTATAAATGGTAAGGAGCCTGTACTGGCAAACTATCCACT--CAACCCCA 360
Query 13753 TGGTTACCCAACCCACGGTGGTTTCCAAGGTGAAATTCTGAACTGGACTAATGGTAGAAC 13812
| | |||| || || ||||||||| | ||| | || ||||||||||| || ||
Sbjct 361 TTG--ACCCTACTCATGGTGGTTTCAAGGGTATACCACTAAACTGGACTAACGGACTTAC 418
Query 13813 TTTAATTCCACATGGTGCTCCCTATTGGGGCGAGTATCTGGACAAATTTACATTTGCCTT 13872
|||||| | |||||||| || ||||| |||||| | || | ||| ||||| ||
Sbjct 419 CAAAATTCCTAAGGGTGCTCCTTACTGGGGTGAGTATTTAGATGTAGCTACCTTTGCTTT 478
Query 13873 TGATGGTGCCCTTGGCTGGAAATCAATCGTTGCAACAGTGTACGGC-CTTAAAGATGATG 13931
||||||||| | | | || ||| |||| || || ||| |||||| |||||
Sbjct 479 TGATGGTGCTTTATCATATGACTCTATCAAGGCAAGTGT-TAAGGCTCTTAAACCTGATG 537
Query 13932 GTGTTACTACTGATTGGAATAAAAAAGGTACTCAATATGATGTAGATTGGGTTATAGCGT 13991
| | ||||||||||| ||| | ||| | ||||| ||||||||| | || ||
Sbjct 538 G---TTCTACTGATTGGGATAGTGATGGTGTAAAGTATGACGTAGATTGGATAATCCTGT 594
Query 13992 ATACAGGTCAGAAAATTGACTGGGATGGTAACATTTTATCAGAAGGTCACCCAGTATCTG 14051
|| ||| | || | || |||||||| | | |||| ||||| ||| | |
Sbjct 595 GGACTGGTGACAAGGTAGATTGGGATGGAGATGTAATATCTTCTGGTCATACAGAAGAGG 654
Query 14052 AAAGAGGTACTGTACAGCTTAAAAACACAAGTGTCAACGGTCCTCACAAGGCTAACTGGT 14111
| | |||||||||||| || || | |||| || | || || ||| ||||| |
Sbjct 655 AGAAAGGTACTGTACAACTAAAGGATACAACCGTACAAGGCATACATAAGTTTAACT-TT 713
Query 14112 GTAACAGGCAA-CCTGTTGAGCATGGTGGTTTTTTGATGGACAGAAACACCCCTTGGCAT 14170
| ||| | || ||| | |||||||| || | | | || |||||||| || | |||
Sbjct 714 GCCACACGTAACCCTCTAGAGCATGGCGGCTATCTTATTGACAGAAATGAACCGTTCCAT 773
Query 14171 AATAGACCTAT 14181
|| ||||||||
Sbjct 774 AACAGACCTAT 784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 285764408813094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |