Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_015938.1 Length=89916 Score E Sequences producing significant alignments: (Bits) Value seq309203 125 4e-24 >seq309203 Length=1072 Score = 125 bits (138), Expect = 4e-24 Identities = 328/491 (67%), Gaps = 12/491 (2%) Strand=Plus/Plus Query 13694 TGTAACTGGTTGGTTAACGGTAAAGAACCTGTTCTTGCCAACTGGCCTCTTGCAACAG-A 13752 ||||||||| | | || ||||| || ||||| || || |||| || || |||| | Sbjct 303 TGTAACTGGATTATAAATGGTAAGGAGCCTGTACTGGCAAACTATCCACT--CAACCCCA 360 Query 13753 TGGTTACCCAACCCACGGTGGTTTCCAAGGTGAAATTCTGAACTGGACTAATGGTAGAAC 13812 | | |||| || || ||||||||| | ||| | || ||||||||||| || || Sbjct 361 TTG--ACCCTACTCATGGTGGTTTCAAGGGTATACCACTAAACTGGACTAACGGACTTAC 418 Query 13813 TTTAATTCCACATGGTGCTCCCTATTGGGGCGAGTATCTGGACAAATTTACATTTGCCTT 13872 |||||| | |||||||| || ||||| |||||| | || | ||| ||||| || Sbjct 419 CAAAATTCCTAAGGGTGCTCCTTACTGGGGTGAGTATTTAGATGTAGCTACCTTTGCTTT 478 Query 13873 TGATGGTGCCCTTGGCTGGAAATCAATCGTTGCAACAGTGTACGGC-CTTAAAGATGATG 13931 ||||||||| | | | || ||| |||| || || ||| |||||| ||||| Sbjct 479 TGATGGTGCTTTATCATATGACTCTATCAAGGCAAGTGT-TAAGGCTCTTAAACCTGATG 537 Query 13932 GTGTTACTACTGATTGGAATAAAAAAGGTACTCAATATGATGTAGATTGGGTTATAGCGT 13991 | | ||||||||||| ||| | ||| | ||||| ||||||||| | || || Sbjct 538 G---TTCTACTGATTGGGATAGTGATGGTGTAAAGTATGACGTAGATTGGATAATCCTGT 594 Query 13992 ATACAGGTCAGAAAATTGACTGGGATGGTAACATTTTATCAGAAGGTCACCCAGTATCTG 14051 || ||| | || | || |||||||| | | |||| ||||| ||| | | Sbjct 595 GGACTGGTGACAAGGTAGATTGGGATGGAGATGTAATATCTTCTGGTCATACAGAAGAGG 654 Query 14052 AAAGAGGTACTGTACAGCTTAAAAACACAAGTGTCAACGGTCCTCACAAGGCTAACTGGT 14111 | | |||||||||||| || || | |||| || | || || ||| ||||| | Sbjct 655 AGAAAGGTACTGTACAACTAAAGGATACAACCGTACAAGGCATACATAAGTTTAACT-TT 713 Query 14112 GTAACAGGCAA-CCTGTTGAGCATGGTGGTTTTTTGATGGACAGAAACACCCCTTGGCAT 14170 | ||| | || ||| | |||||||| || | | | || |||||||| || | ||| Sbjct 714 GCCACACGTAACCCTCTAGAGCATGGCGGCTATCTTATTGACAGAAATGAACCGTTCCAT 773 Query 14171 AATAGACCTAT 14181 || |||||||| Sbjct 774 AACAGACCTAT 784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 285764408813094