Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_016073.1 Length=157950 Score E Sequences producing significant alignments: (Bits) Value seq520838 86.0 6e-12 seq451005 84.2 2e-11 >seq520838 Length=421 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/178 (72%), Gaps = 8/178 (4%) Strand=Plus/Plus Query 84407 CTTTCATTTTACTACCCAACATTTCAAAAACCTTACGATGTTTATCCAGTTCTGGC-TTC 84465 |||| |||| || | |||| ||| || || |||||||| | || || | || Sbjct 198 CTTTAGTTTTGCTTGCTAACACTTCGAACACTTTACGATGCTCATTCAACGAATCCATTA 257 Query 84466 AGATATTCGTTGTAGAAACCACGAGTACCTTCAGGATTAGCACAGCCTTCAAGAATGAAG 84525 ||| | || |||||||| ||||| | | ||| || ||| |||| || || | |||||| Sbjct 258 AGA-ACTCATTGTAGAATCCACGCGCAGGTTCTGGGTTAACACAACCCTCTAACATGAAG 316 Query 84526 AACACGTGCTTGTTACC---AGTTTGCTCCCCATCCCAATGGTTTGGTGAATTCAGGA 84580 |||| ||||||||||| |||||| | || |||||||||||||||| |||| || Sbjct 317 AACAAATGCTTGTTACCAAGAGTTTGAT---CACCCCAATGGTTTGGTGAGTTCATGA 371 >seq451005 Length=948 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 137448 TTGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 137507 ||| | |||||||||| |||| ||||||| |||||||||||||| ||| |||||||||| Sbjct 143 TTGCCTCCGTAGCTCAATGGT-AGAGCAGGCGACTCATAATCGACAGGTTGCTGGTTCAA 85 Query 137508 GTCCAGCC 137515 |||||||| Sbjct 84 GTCCAGCC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501992719167200