Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq449735 279 9e-70 seq520652 170 3e-37 seq353462 165 1e-35 seq128994 158 2e-33 seq497288 140 6e-28 seq522862 102 1e-16 seq511105 98.7 2e-15 seq517516 95.1 2e-14 >seq449735 Length=3187 Score = 279 bits (308), Expect = 9e-70 Identities = 734/1114 (66%), Gaps = 20/1114 (2%) Strand=Plus/Minus Query 207804 TAGCTTGATCAGACTCATTACAGTTGGAAATCACCGAACTCGGCAGTATCTACTTCTGAG 207863 ||| | |||||| |||||| | | || ||||| || || | | ||| |||| ||| Sbjct 2911 TAGGTCGATCAG--TCATTATAAATCAAAGTCACCAAATTCAGAGGCATCAACTTGCGAG 2854 Query 207864 TCGATCTGACCTACCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACGTTG 207923 || || ||||| || ||||| || || ||| |||| || || || || || ||||| Sbjct 2853 TCTATTTGACCAACAAGGTAGGAGCTAATTTCAGCTTCTTGTGGTGCTACTTGCACGTTA 2794 Query 207924 TCAGTTACCAGCCATGAGTTAATCCATGGAATTGGGTTAGAGTTGGTTTTGAA---TGGA 207980 || | |||| ||| ||||| |||||||| || || ||| |||| |||| || || | Sbjct 2793 TCTGACACCAACCAAGAGTTTATCCATGGGATAGGATTACTGTTGTTTTTAAACTGTGCA 2734 Query 207981 AGATCCAAACCGATCGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGGCAGAGG 208040 || ||||| || || ||| || |||||||||||| ||||| ||||| || | Sbjct 2733 GGA---AAACCAATGGCTGTCATTCGAGCGTTGGTAATGTATTCAACGTACTGACATAAA 2677 Query 208041 ATCTCTTTGTTCAGACCGATCATTGAACCATCTTTGAACAGATAGTCAGCCCACTCTTTT 208100 || | ||| || | || |||||||| ||||||||||| | || || ||||| |||||| Sbjct 2676 ATGTGTTTATTTAAGCCAATCATTGAGCCATCTTTGAATAAGTACTCGGCCCATTCTTTT 2617 Query 208101 TCTTGCTGAGCGGTAGCAACGAACATGTCGTATGACTCTTGACGACACTCTGCTGCAATC 208160 ||||||| || | | || ||||| | || || | || |||| || |||| Sbjct 2616 TCTTGCTCTGCAGCGTCCACAAACATTTTAATTGCTTCGTCGCGGCACTGCGCGGCAACA 2557 Query 208161 TCAGCCATCTCTGGATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGTACCA 208220 ||||| |||||||| |||||||| | ||| | || | || |||||||| ||| Sbjct 2556 ATCGCCATTTCTGGATCGTCTTTACCGTCTTGCATAATATTTAAAATATGCTGAGTGCCA 2497 Query 208221 ACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTCCATC 208280 | || || ||||| || || || || | ||||| || |||||||||||||||||| Sbjct 2496 GATAAATGTAGCGCTTCATCGCGGGCAATAAGCTTGATTATTTTAGCGTTACCTTCCATC 2437 Query 208281 AGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGAATAGCTTCA 208340 | | ||| || ||||| || || ||||| || ||| || || |||||||| ||||| Sbjct 2436 AATTCACGCTCAGCAAACGCAAACGAGCAGGCAAAGCTGACATAAAAACGAATCGCTTCT 2377 Query 208341 AGTGAGTTGATAGATTGCAGAGCCAGGTACAGTGCTTTCTTAAT-AGCACGA--AGATTA 208397 | || | || || |||||||| || |||||| | ||| | | | |||| Sbjct 2376 AAAATATTTACCGACATCATTGCCAGGTAAAG---TTTCTTTTTCAGCTCAAATAAATTA 2320 Query 208398 ACATTAACCTTCTCGCCATTGACTACGTGGTCACCCAGACCCAGGTAATAGTACTGGTTG 208457 ||| ||| | || || | | || | || ||| ||| ||| | Sbjct 2319 ACAACAACAGATTTACCGTTAATCTCATGTTTGCCTTCACCGTATAAATTGTAAAGCGAC 2260 Query 208458 ATCAAGGCAATCAGTTTGTCGTAGTAATGGGAAACAGATGCAGCACGTTTCTTGATATGT 208517 | || ||| | | |||||||| | | || | | ||||||| | || | Sbjct 2259 ACTGAGTTAATTAAATCATCGTAGTATTTTGTTACCGCATCGGCACGTTCACTAATTTTG 2200 Query 208518 TCGTTATCTACAACGTCATCAAAGACAATGGAAGG---ATCGTTAACGATGTTCCTGATG 208574 || || || | ||||||||| | || ||| | | |||| || | || Sbjct 2199 TCATTGCTAACTATGTCATCAAAAATAAGTTCAGGTGCTTGGGTAAC---ATTACGAATA 2143 Query 208575 ATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTT 208634 || || || || || || || || |||||| || |||| || || ||||||| Sbjct 2142 ATATGCGTGTACGAGCGGCTATGAATCGTTTCACTAAACGCCCACGTTTCTATCCATGTT 2083 Query 208635 TCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATA 208694 || | |||||| | || || || |||| || |||||||| ||| || || | Sbjct 2082 TCTAACTCTGGTAGCGATACAATAGGTAGTAGGGCCACGTTTGGTGAACGCCCTTGTACG 2023 Query 208695 GAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGT 208754 || || | ||| |||||||| | |||||| | || | || || || ||||| ||| Sbjct 2022 CTATCAAGCAATGTTTGATATTTTAAGTTACTTAAAAATATATGCTTTTCATGATCAGGT 1963 Query 208755 AAAGCCATGTAGTCAATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAA 208814 || || |||| | ||||| | || ||||||||||| || ||||| || || Sbjct 1962 AATGCTTGAAAGTCTAAGCGGTCTTTGCTTACGTCTACTTCTTCTGGGCGCCAAAAAAAC 1903 Query 208815 GAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAA 208874 ||||| || || ||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 1902 GAAAGCTGCTTTTCAATTAGTTTTTCAAAAATAGGGTATTTTTGTTGATCATAACGAGAT 1843 Query 208875 ACGTTGACGTTTTGACCCAGGAACATGTGTTCTT 208908 ||||| ||| |||| || | ||||| | |||| Sbjct 1842 ACGTTAACGGTTTGGCCGAAAAACATTGGCTCTT 1809 >seq520652 Length=611 Score = 170 bits (188), Expect = 3e-37 Identities = 236/326 (72%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 207858 TCTGAGTCGATCTGACCTACCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGA 207917 |||||||| |||||||| |||| ||| || | ||| || || || ||||| || Sbjct 287 TCTGAGTCAATCTGACCAACCAAGTATGAGCTGATTTCCGTCTCTTGCGGGGCAACTTGT 346 Query 207918 ACGTTGTCAGTTACCAGCCATGAGTTAATCCATGGAATTGGGTTAGAGTTGGTTTT---G 207974 |||||||||| | || ||||| ||||||||| || |||||||| || || | || | Sbjct 347 ACGTTGTCAGATGACAACCATGTGTTAATCCACGGGATTGGGTTTGATTTAGAATTCGGG 406 Query 207975 AATGGAAGATCCAAACCGATCGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGG 208034 |||| | ||| || | ||| | |||||| | ||||| || || || | ||| ||| Sbjct 407 AATGCGACTGGCAAGCCAACCGCTTCCATACGTAAATTGGTGATATATTCGATATATTGG 466 Query 208035 CAGAGGATCTCTTTGTTCAGACCGA-TCATTGAACCATCTTTGAACAGATAGTCAGCCCA 208093 || || || ||||| || ||||| | ||||||| || ||||||||||||||| | ||||| Sbjct 467 CACAGAATGTCTTTATTGAGACCAAATCATTGAGCCGTCTTTGAACAGATAGCCTGCCCA 526 Query 208094 CTCTTTTTCTTGCTGAGCGGTAGCAACGAACATGTCGTATG-ACTCTTGACGACACTCTG 208152 ||||||||||||| ||| | | ||| || ||| ||| |||| | |||||| Sbjct 527 TTCTTTTTCTTGCTCAGCCGCTTTACGGAATATCTCG-ATGCTTTCTTCATAGCACTCTT 585 Query 208153 CTGCAATCTCAGCCATCTCTGGATCA 208178 ||||| || ||||||| |||||| Sbjct 586 TAGCAATGTCGACCATCTCAGGATCA 611 >seq353462 Length=332 Score = 165 bits (182), Expect = 1e-35 Identities = 199/269 (74%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 208616 CCAGGTCTCAGCCCATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTT 208675 ||| |||||| |||||| || ||||| || || || | || | || | ||||| Sbjct 11 CCACGTCTCAATCCATGTCTCAAGCTCAGGAATCGATACCAATGGCAATAGCACCACGTT 70 Query 208676 TGGACCACGGCCCTGGATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAACAG 208735 ||| | ||| || ||||||||||| ||||| || ||||| || ||||||||||| || | Sbjct 71 TGGGCTACGACCTTGGATAGAGTCGAGTAGCGTTTGATACTTTAGGTTACTGATAAAGAT 130 Query 208736 GTGTTTCTCGTGATCTGGTAAA--GCCATGTAGTCAATACGGTCACGGGAGACATCTACT 208793 || | ||||| | ||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 131 ATGCTGTTCGTGTGAGGACAAATTGCCAT--AATCCATACGATCACGTGATACATCGACT 188 Query 208794 TCTTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTCAATGAGTTTCTCAAAGATCTCATAC 208853 ||||| |||||||| ||||| || ||||| || ||||| | || ||||||||| | | Sbjct 189 TCTTCTGGACGCCAAAAGAACGACAGTTGCTTTTCAATCAATTGCTCAAAGATAGGGTGC 248 Query 208854 TTCTGTTGGTCGTAACGAGAAACGTTGAC 208882 || |||||||||||||| | |||||||| Sbjct 249 TTTTGTTGGTCGTAACGCGCCACGTTGAC 277 >seq128994 Length=861 Score = 158 bits (174), Expect = 2e-33 Identities = 489/754 (65%), Gaps = 12/754 (2%) Strand=Plus/Plus Query 208010 GTTGGTAATGTACTCAACATACTGGCAGAGGATCTCTTTGTTCAGACCGATCATTGAACC 208069 ||| ||||| ||||||| |||||||| | |||| || |||| || ||||| ||||| Sbjct 113 GTTAGTAATAAACTCAACGTACTGGCATAAAATCTGTTCATTCAAGCCAATCATCGAACC 172 Query 208070 ATCTTTGAACAGATAGTCAGCCCACTCTTTTTCTTGCTGAGCGGTAGCAACGAACATGTC 208129 ||||||||| | || | ||||| ||||||||||| | || | ||||| | ||| Sbjct 173 ATCTTTGAATAAGTACTTGGCCCATTCTTTTTCTTGTTCCGCCGCTTTGACGAATAAGTC 232 Query 208130 GTATGACTCTTGACGACACTCTGCTGCAATCTCAGCCATCTCTGGATCATCTTTACCAGA 208189 || | ||||| |||||| || ||||| || |||| ||||| || ||||||||| Sbjct 233 ATACGCTTCTTGCTTACACTCAGCAGCAATTTCTCCCATTTCTGGGTCGTCTTTACCACC 292 Query 208190 GTTCATCAGGTTGATGATGTGCTGAGTACCAACCATGTGAAGTGCTTCGTCACGTGCGAT 208249 | |||||| | ||||| || |||| | | ||| | ||||| ||||| || || Sbjct 293 CTGCATCAGAGCTAAAATGTGTTGTGTACTATTGAGGTGTAAGGCTTCATCACGGGCAAT 352 Query 208250 CATTTTGATGATCTTAGCGTTACCTTCCATCAGCTTACGTTCGGCAAATGCGAATGAGCA 208309 | || || ||||| ||||||||||| | |||||| ||||| || || || || Sbjct 353 TAAGCGAATAATTTTAGCATTACCTTCCATAACACGACGTTCAGCAAAGGCAAACGAACA 412 Query 208310 AGCGAAGGATACGTAGAAACGAATAGCTTCAAGTGAGTTGATAGATTGCAGAGCCAGGTA 208369 || || || ||||| ||||| ||||| | | |||| || || || || Sbjct 413 GGCAAAACTGACATAGAAGCGAATCGCTTCTAAGGCATTGACTGACATCATGCACAAATA 472 Query 208370 CAGTGCTTTCTTAATAGCACGAAGATTAACATTAACCTTCTCGCCATTGACTACGTG--- 208426 || || || |||| | ||| |||||| ||| | | || |||| ||||| Sbjct 473 CAATGACTTTTTAAGAATACGTGAATTAACGGTAATTTCTTTACCGTTGATAACGTGCGT 532 Query 208427 ---GTCACCCAGACCCAGGTAATAGTACTGGTTGATCAAGGCAATCAGTTTGTCGTAGTA 208483 ||||| | | || || || | |||| || | | ||| | | ||||| || Sbjct 533 TCCTTCACC--TAACAAGTTATTAAT-CTGGGTG---AGGTTAATTAAGTCATCGTAATA 586 Query 208484 ATGGGAAACAGATGCAGCACGTTTCTTGATATGTTCGTTATCTACAACGTCATCAAAGAC 208543 | || || | | ||||| || || | || || | ||||| || ||||| || Sbjct 587 AGCGGCAATATCACCGGCACGCTTTAAAATTTCATCATTTTGTACAATATCGTCAAATAC 646 Query 208544 AATGGAAGGATCGTTAACGATGTTCCTGATGATGTGAGTATAGCTACGACTGTGGATGGT 208603 | || || | ||||| || || | || |||||||| || ||| ||| ||||| Sbjct 647 CAAAGATGGGTTATTAACAATATTACGAATAATGTGAGTGTACGAACGCGAGTGAATGGT 706 Query 208604 TTCAGAGAAGCCCCAGGTCTCAGCCCATGTTTCCAGCTCTGGGATAGAGCAGATCGGGAG 208663 |||||| || ||| || ||| ||| ||||||| || || | || | || | Sbjct 707 TTCAGAAAACGACCATGTTTCAATCCACGTTTCCAATTCAGGTAGCGATACCAAAGGCAA 766 Query 208664 TAATGCAACGTTTGGACCACGGCCCTGGATAGAGTCCAGTAGTGTCTGATATTTCAGGTT 208723 ||||| || || || ||||| || || ||||| | | || || || |||| || Sbjct 767 AAATGCCACATTCGGTGAGCGGCCTTGAATTGAGTCTAACAAGGTTTGGTACTTCAAATT 826 Query 208724 ACTGATGAACAGGTGTTTCTCGTGATCTGGTAAA 208757 || ||| | |||| || || || |||||| Sbjct 827 TGAGAAGAAAATATGTTGTTCATGTTCAGGTAAA 860 >seq497288 Length=389 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 208511 GATATGTTCGTTATCTACAACGTCATCAAAGACAATGGAAGGATCGTTAACGATGTTCCT 208570 |||||| ||||| | | | |||||||||||| || | ||| || || | || || | Sbjct 116 GATATGATCGTTTTGCATGATGTCATCAAAGACGATAGCAGGGTCATTGATAATATTACG 175 Query 208571 GATGATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCA 208630 ||||| || |||||||| || ||| ||||| ||||| || ||| |||||| ||| Sbjct 176 AATGATATGGGTATAGCTGCGCGAGTGAATGGTCTCAGAAAACGTCCACGTCTCAATCCA 235 Query 208631 TGTTTCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTG 208690 ||||| ||||| || ||||| | ||| | || | |||||||| | ||| || || Sbjct 236 CGTTTCAAGCTCAGGAATAGACACCAGCGGCAATAGCACCACGTTTGGGCTACGACCTTG 295 Query 208691 GATAGAGTCCAGTAGTGTCTGATATTTCAGGTTACTGATGAA 208732 ||||||||| ||||| |||||||| || ||||||||||| || Sbjct 296 GATAGAGTCGAGTAGGGTCTGATACTTTAGGTTACTGATAAA 337 >seq522862 Length=256 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 208575 ATGTGAGTATAGCTACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTT 208634 || || || ||||| | |||||||| || ||| |||| |||||| || |||||| Sbjct 153 ATATGTGTGTAGCTCTGGCTGTGGATAGTCTCACTGAAGGACCAGGTTTCGATCCATGTC 94 Query 208635 TCCAGCTCTGGGATAGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATA 208694 || | ||| || | || |||||| |||||||| | ||| |||| ||| ||||| || Sbjct 93 TCTAACTCAGGTAAGGATACGATCGGAAGTAATGCCATGTTAGGACTACGACCCTGTATC 34 Query 208695 GAGTCCAGTAGTGTCTGATATTTCAGGTT 208723 ||||| | |||||| |||||||||||||| Sbjct 33 GAGTCTAATAGTGTTTGATATTTCAGGTT 5 >seq511105 Length=248 Score = 98.7 bits (108), Expect = 2e-15 Identities = 136/188 (72%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 208155 GCAATCTCAGCCATCTCTGGATCATCTTTACCAGAGTT---CATCAGGTTGATGATGTGC 208211 ||||| || ||||||||||||| || ||||| ||| ||| || |||| || ||| Sbjct 14 GCAATTTCTACCATCTCTGGATCGTCCTTACC---GTTACGCATAAGATTGAGCATATGC 70 Query 208212 TGAGTACCAACCATGTGAAGTGCTTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTA 208271 || || || | || || || || ||||| || || | ||||| || || |||||| Sbjct 71 TGCGTGCCGGTTAAATGTAGCGCCTCATCACGCGCAATGAGCTTGATAATTTTGGCGTTA 130 Query 208272 CCTTCCATCAGCTTACGTTCGGCAAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGA 208331 ||||||||||| ||||| || || || || || ||||| || || || | || || ||| Sbjct 131 CCTTCCATCAG-TTACGCTCAGCGAACGCAAACGAGCAGGCAAATGAGGCATAAAAGCGA 189 Query 208332 ATAGCTTC 208339 || ||||| Sbjct 190 ATCGCTTC 197 >seq517516 Length=501 Score = 95.1 bits (104), Expect = 2e-14 Identities = 284/430 (66%), Gaps = 10/430 (2%) Strand=Plus/Minus Query 207831 AAATCACCGAACTCGGCAGTATCTACTTCTGAGTCGATCTGACCTACCAGGTAAGAAGAA 207890 || ||| | || ||| | | ||||||| ||| || | ||| || || | || ||| Sbjct 426 AAGTCATCAAAGTCGTCGGCATCTACTGATGAATCTACCTGGCCAACTAAATAGCTAGAT 367 Query 207891 ACTTCTACTTCCTGAGGAGCAACCTGAACGTTGTCAGTTACCAGCCATGAGTTAATCCAT 207950 | ||| ||| || || |||||||| ||||||||| | || || | || || ||||| Sbjct 366 ATTTCAGTTTCTTGCGGGGCAACCTGGACGTTGTCACTAACAAGATAAGAATTCATCCAA 307 Query 207951 GGAATTGGGTTAGAGTTGGTTTTGAATGGAAGATCCAAACCGATCGCCTGCATACG-GAT 208009 || | ||||||| || | ||| | || ||| |||||||| || | || | | | Sbjct 306 GGTAGTGGGTTACTTTTTATATTGTAAGGGGCATCAAAACCGATAGC--GGTTAAGCGTT 249 Query 208010 G-TTGGTAATGTACTCAACATACTGGCAGAGGATCTCTTTGTTCAGACCGATCATTGAAC 208068 | || | ||| || |||| || || | || || || || || |||||||| | Sbjct 248 GATTAGAAATATATTCAATGTATTGATTTAAAATTTCAGCATTAAGGCCAATCATTGAGC 189 Query 208069 CATCTTTGAACAGATAGTCAGCCCACTCTTTTTCTTGCTGAGCGGTAGCAACGAACATGT 208128 ||||||| || | || | ||||| ||||||||||||| | | | | | ||| || | Sbjct 188 CATCTTTAAATAAGTACTGGGCCCATTCTTTTTCTTGCTCAACAACATCTAAGAAAATCT 129 Query 208129 CGTATG-ACTCTTGACGACACTCTGCTGCAATCTCAGCCATCTCTGGATCATCTTTACCA 208187 ||| | ||| | || | |||| | || | | ||| || |||||||||||||| Sbjct 128 -GTAAGCCCTCATTACTAAGCTCTTCACTAACCACTTTCATTTCAGGATCATCTTTACC- 71 Query 208188 GAGTTCATCAG--GTTGATGATGTGCTGAGTACCAACCATGTGAAGTGCTTCGTCACGTG 208245 || | ||| || | || ||||||||||| | || |||||||| ||||| | Sbjct 70 -GGTGCGCCAGTTATTAAGAATATGCTGAGTACCGGTTAAATGTAGTGCTTCATCACGAG 12 Query 208246 CGATCATTTT 208255 | || | ||| Sbjct 11 CAATTAATTT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905109625882640