Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq24926 96.9 9e-16 seq498858 87.8 4e-13 >seq24926 Length=5984 Score = 96.9 bits (106), Expect = 9e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2813 TGGTGCGGCATGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCC 2872 |||||| | |||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct 5837 TGGTGCACCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTATCC 5778 Query 2873 AACTGAGCTAATG 2885 |||||||||| || Sbjct 5777 AACTGAGCTACTG 5765 >seq498858 Length=398 Score = 87.8 bits (96), Expect = 4e-13 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 31585 ACGGCGTTAACCAGTTGTGCTTCATAGCCAAGAGTTCCGTTTACAACGTGCGTCTTCTGT 31644 || |||||||| | || |||||||||||||| |||||| | |||||||| ||||| || Sbjct 127 ACAGCGTTAACAAACTGCGCTTCATAGCCAAGCGTTCCGCTAACAACGTGAGTCTTTTGC 186 Query 31645 GCAACAGCGAACGGGTTCATGCCCCATTGCGCCGCCTGCAT 31685 |||| |||||||| ||||| |||||| || | ||||| Sbjct 187 CCAACTGCGAACGGATTCATTTTCCATTGAGCAGATTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122895475088904