Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_016770.1
Length=47159
Score E
Sequences producing significant alignments: (Bits) Value
seq512506 87.8 5e-13
>seq512506
Length=396
Score = 87.8 bits (96), Expect = 5e-13
Identities = 154/220 (70%), Gaps = 7/220 (3%)
Strand=Plus/Plus
Query 3380 TGTTCAACGTGATTCAAATATATATGTCCGTCCCCGATAGTGTGAATGAAT-CTACGAGG 3438
||||||| || || || |||||| |||| || | ||||||||||||| | | |
Sbjct 36 TGTTCAAAATGGTTGTTGTAAATATGTGCGTCACCAAAAGTGTGAATGAATTCGCCTA-- 93
Query 3439 CTT-TAAGCCGCAAACCTGCGCTACCATAGACAGCAAGATAGAATAAGACGCAATGTTGA 3497
||| |||| || || ||||| | ||| | ||| | || |||||| |||||||| |
Sbjct 94 CTTCTAAGTTACACACTTGCGCAATCATCATCGTCAATAAAGCATAAGAAGCAATGTTAA 153
Query 3498 AAGGAACGCCTAAAAATAGGTCTGCACTTCTTTGATACAGTTTCAAATCCAAATAACCGG 3557
| ||||| || || || | || ||||||| ||| |||| || | || | ||
Sbjct 154 AGGGAACTCCCAAGAAAATATCGGCACTTCGTTGGTACAATTGACACGATAATTTCCC-- 211
Query 3558 ACTCAGACACATAGAACTGAAAAAAGCAGTGGCACGGAGG 3597
||||| ||||| |||||||||||| |||||| |||||
Sbjct 212 -CTCAGCTACATAAAACTGAAAAAAGGCGTGGCAAGGAGG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149846237169804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |