Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_016770.1 Length=47159 Score E Sequences producing significant alignments: (Bits) Value seq512506 87.8 5e-13 >seq512506 Length=396 Score = 87.8 bits (96), Expect = 5e-13 Identities = 154/220 (70%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 3380 TGTTCAACGTGATTCAAATATATATGTCCGTCCCCGATAGTGTGAATGAAT-CTACGAGG 3438 ||||||| || || || |||||| |||| || | ||||||||||||| | | | Sbjct 36 TGTTCAAAATGGTTGTTGTAAATATGTGCGTCACCAAAAGTGTGAATGAATTCGCCTA-- 93 Query 3439 CTT-TAAGCCGCAAACCTGCGCTACCATAGACAGCAAGATAGAATAAGACGCAATGTTGA 3497 ||| |||| || || ||||| | ||| | ||| | || |||||| |||||||| | Sbjct 94 CTTCTAAGTTACACACTTGCGCAATCATCATCGTCAATAAAGCATAAGAAGCAATGTTAA 153 Query 3498 AAGGAACGCCTAAAAATAGGTCTGCACTTCTTTGATACAGTTTCAAATCCAAATAACCGG 3557 | ||||| || || || | || ||||||| ||| |||| || | || | || Sbjct 154 AGGGAACTCCCAAGAAAATATCGGCACTTCGTTGGTACAATTGACACGATAATTTCCC-- 211 Query 3558 ACTCAGACACATAGAACTGAAAAAAGCAGTGGCACGGAGG 3597 ||||| ||||| |||||||||||| |||||| ||||| Sbjct 212 -CTCAGCTACATAAAACTGAAAAAAGGCGTGGCAAGGAGG 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149846237169804