Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq496362 165 1e-35
>seq496362
Length=882
Score = 165 bits (182), Expect = 1e-35
Identities = 392/587 (67%), Gaps = 13/587 (2%)
Strand=Plus/Minus
Query 37178 TGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCC 37237
||| |||||||| || | |||||| || | | |||||||| || || || || |||||
Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572
Query 37238 TGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAAT 37297
|||||| ||||||| |||||| | ||| || || | ||||| || || ||||||||
Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512
Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357
||||| ||||||||||| || | | || ||||| ||| |||| |||
Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA---GAATCTGAATC---AAT 458
Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417
||||| ||| ||| || || || ||| | | || ||| | ||| || ||
Sbjct 457 CCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAA 398
Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477
| | | ||| ||| | ||| ||| |||||| || |||| || |||| ||||
Sbjct 397 TAAATCGGCTTTCTCTGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTTC 338
Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATA-AAAACACCTAGCTTCAGATAATT 37536
|||||||||||| || || || |||||||| ||| | | ||||||| |||
Sbjct 337 GCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATATT 278
Query 37537 GAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAA 37596
| || || || | ||| | | ||| | |||||||| || || || || ||| || |
Sbjct 277 GCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCGA 218
Query 37597 AGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC---ATTTGATAATTTTTTCCAAT 37653
| || || | || | ||| ||||| | | ||| || ||| | || ||||| |
Sbjct 217 AAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTCCAGT 158
Query 37654 CATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC-CAATGCACGT 37712
| || | ||||| ||| ||||||| ||| || | ||||| ||||| || | ||| | |
Sbjct 157 CGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATGGA--T 100
Query 37713 TTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759
||||| | ||||||||| | || | || ||||| || |||||
Sbjct 99 TTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAA 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588426004212080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |