Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq496362 165 1e-35 >seq496362 Length=882 Score = 165 bits (182), Expect = 1e-35 Identities = 392/587 (67%), Gaps = 13/587 (2%) Strand=Plus/Minus Query 37178 TGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCC 37237 ||| |||||||| || | |||||| || | | |||||||| || || || || ||||| Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572 Query 37238 TGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAAT 37297 |||||| ||||||| |||||| | ||| || || | ||||| || || |||||||| Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512 Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357 ||||| ||||||||||| || | | || ||||| ||| |||| ||| Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA---GAATCTGAATC---AAT 458 Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 ||||| ||| ||| || || || ||| | | || ||| | ||| || || Sbjct 457 CCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAA 398 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 | | | ||| ||| | ||| ||| |||||| || |||| || |||| |||| Sbjct 397 TAAATCGGCTTTCTCTGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTTC 338 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATA-AAAACACCTAGCTTCAGATAATT 37536 |||||||||||| || || || |||||||| ||| | | ||||||| ||| Sbjct 337 GCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATATT 278 Query 37537 GAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAA 37596 | || || || | ||| | | ||| | |||||||| || || || || ||| || | Sbjct 277 GCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCGA 218 Query 37597 AGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC---ATTTGATAATTTTTTCCAAT 37653 | || || | || | ||| ||||| | | ||| || ||| | || ||||| | Sbjct 217 AAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTCCAGT 158 Query 37654 CATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC-CAATGCACGT 37712 | || | ||||| ||| ||||||| ||| || | ||||| ||||| || | ||| | | Sbjct 157 CGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATGGA--T 100 Query 37713 TTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 ||||| | ||||||||| | || | || ||||| || ||||| Sbjct 99 TTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAA 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588426004212080