Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_017969.1
Length=108853
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 217 1e-51
seq507483 170 1e-37
seq450559 109 4e-19
seq506238 102 6e-17
seq351952 100 2e-16
seq155978 100 2e-16
seq484804 93.3 3e-14
seq521735 87.8 1e-12
>seq426744
Length=341
Score = 217 bits (240), Expect = 1e-51
Identities = 242/314 (77%), Gaps = 8/314 (3%)
Strand=Plus/Plus
Query 99235 ATTAAGATGCAGCGTAAGCACCAGATACAACGCCATTACTA--AAGTA-ACGTTGCAGGT 99291
|||| | ||| ||||| | ||||| || | || |||| || | |||||| ||||
Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88
Query 99292 TAACACGCTGAGTAACGTAGTACGCATCACGCTGTTTACCAGCTTGACGCTCACGTTCAA 99351
||| ||| ||||| |||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148
Query 99352 CAGTAACAGCACGCTGACGAGGCATTACAAAGTTATCTTTGTAAACAATAACTGCGAACT 99411
| |||| || ||| |||||||| | || ||||| || |||||| ||| ||| |
Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208
Query 99412 CTTTATCTG-CTGCTTTAGCTGGGAAATACTCAGAAACTACAACCGGAAGACCGTAAATA 99470
| | | ||| | |||||||||||||| || | |||||||| ||| | |||||||| |||
Sbjct 209 C-TGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATA 267
Query 99471 CGACCAACCTGACCTTGCAG-TTTAAC-AG-CATCATTACCAACCTGTGCAACATCCTGC 99527
|||||||| || ||||| || |||||| || ||| |||||| || ||||||||||
Sbjct 268 CGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGC 327
Query 99528 CATTCTTCATCTTC 99541
||||||||||||||
Sbjct 328 CATTCTTCATCTTC 341
>seq507483
Length=1083
Score = 170 bits (188), Expect = 1e-37
Identities = 564/862 (65%), Gaps = 39/862 (5%)
Strand=Plus/Plus
Query 70479 TAAATTGACGGATACTGGAGCAGATTCTACGGATGCAGAAGCTCTGAACGAACTGGCTAC 70538
|||||| || | |||||| ||| ||||| |||||||||| || | |||| |
Sbjct 227 TAAATTTACAGGTACTGGTGCAATCTCTACTGATGCAGAAGTACTAGAAAAACTAGG--- 283
Query 70539 GCAGCATCCAATT-GCTA----AGACTCTACTAGAGATTCGTAAGCTGACTAAGCTGATC 70593
|| | || || |||| || ||||| |||||||| ||| || || | |
Sbjct 284 --AGAAACCCATGAGCTACCCAAGTTACTACTGGAGATTCGCAAGGCAACAAAAGTACTT 341
Query 70594 TCTACTTATGTTGAGAAGATTCTTCTGAGTATTGATGCAGATGGTTGCATT--CGTACTG 70651
||||||||| ||||| | | ||||| ||||||| |||| ||||| |
Sbjct 342 AATACTTATGTAATTAAGATGTTAGACAACATTGACCGAGATGGT--CATTTACGTACAG 399
Query 70652 GTTTCCACGAACATATGACTACTTCTGGTCGTCTGAGTTCTTCTGGTAAACTGAACTTGC 70711
| || | |||| | ||| ||||| |||||||| ||||| || || ||||| ||||| |
Sbjct 400 GGTTTAGCCAACACACGACCACTTCGGGTCGTCTAAGTTCATCAGGCAAACTTAACTTAC 459
Query 70712 AACAGCTACCTCGTGATGAATCTATTATCAAGGGTTGTGTAGTAGCTCCTCCTGGGTATC 70771
| || || ||||||||||| |||| | ||||| ||| | ||||||||| | || |||
Sbjct 460 AGCAACTTCCTCGTGATGATGCTATGGTTAAGGGATGTATTGTAGCTCCTGCGGGCTATA 519
Query 70772 GTGTAATCGCATGGGACTTAACAACTGCGGAAGTTTATTATGCTGCTGTTCTATCTGGTG 70831
| ||| | || ||| | |||||||||| | | || || | || ||| |
Sbjct 520 GAGTAGTAGCCGTGGATATGGAAACTGCGGAAATGTGGGTAGCAGCAGCACTTAGTGGGG 579
Query 70832 ATAGAA-ATATGCA-ACAGGTATTTATCAACATGAGAAATGAACCTGATAAATACCCGGA 70889
||| || | | || | || |||| | | ||| | | || | || | ||
Sbjct 580 ATAAAAGACCTACAGAAAGTGTTTTAACGATATGGCTGACAAGTCTATTGTATCTGCCGA 639
Query 70890 CTTCCA---CTCTAACATCGCACACATGGTATTTAAGCTCCAATGCGAACCCCGTGATGT 70946
|||||| |||| || ||||||||||| || |||| | || | | | |||
Sbjct 640 CTTCCACAGCTCT---ATTGCACACATGGTGTTCAAGCCAAACTGTCTAGCGCATGA--A 694
Query 70947 TAAAAAGC--TGTTCCCAGCTTTGCGTCAAGCAGCTAAAGCAATCACCTTTGGTATTCTG 71004
| |||||| ||||||| || || ||||| || ||||||| || | || ||||||||
Sbjct 695 TTAAAAGCTATGTTCCCTGCATTACGTCAGGCTTCTAAAGCTATTTCATTCGGTATTCTA 754
Query 71005 TATGGTTCTGGCCCAGCTAAAGTAGCTCATTCTGTTAACGAAGCTCTTCTGGAACAGGCT 71064
| ||| ||| |||||||| ||||| | ||| |||| || | || | || || |
Sbjct 755 TTCGGTAGTGGACCAGCTAAGGTAGCAGAATCTATTAATGAGTCGCTATTTGAGCAACAT 814
Query 71065 GCTAAGACAGGAGAACCGTTTGTTGAATGTACTGTTGCGGA---TGCGAAGGACTATATT 71121
| ||||| || || | ||| || || | || || || || || |||
Sbjct 815 GTAAAGACGGGTTGCCC---TTACGAACCTATTGATAAAGAAACAGCTAAAGATTACATT 871
Query 71122 GAAACTTACTTCGGTCAGTTCCCGCAGCTTAAGCGTTGGATTGATAAGTGCCACGATCAG 71181
|| |||||| ||| ||||| | || || ||||||||||| || ||| || |||
Sbjct 872 GATGTTTACTTTAGTCGTTTCCCTGACCTGAAACGTTGGATTGACGCGTCCCATGAGCAG 931
Query 71182 ATCAAGAATCATGGATTTATCTATAGTCACTTTGGTCGTAAACGTCGTCTGCATAATATC 71241
|| | ||||| ||||| ||||| ||||| || ||||||||| | || | |||||||
Sbjct 932 ATTCTACAGCATGGGTTTATTTATAGCCACTTCGGACGTAAACGTAGACTACGTAATATC 991
Query 71242 CATTC--CGAAGACCGTG-GTGTTCAGGGTGAAGAAATT-CGTTCTGGATTTAACGCAAT 71297
| || || | | | |||| |||||||| || ||||| || || ||||| ||
Sbjct 992 CGCTCAGCGTCTAGAGAGACTGTT---GGTGAAGAGCTTACGTTCAGGCTTCAACGCTAT 1048
Query 71298 CATTCAGTCTGCTTCTTCTGAT 71319
|||||| || || ||||||
Sbjct 1049 CATTCAAGGGGCATCATCTGAT 1070
>seq450559
Length=633
Score = 109 bits (120), Expect = 4e-19
Identities = 189/271 (70%), Gaps = 8/271 (3%)
Strand=Plus/Plus
Query 52909 ACTGAAAAAGAA-GTCTATGACGCTTGTCAGGGTTTAGAATATGAAATCAATACCATGTT 52967
|| |||||||| ||| ||||||| | ||| | ||||||||| | |||||| ||
Sbjct 296 ACCGAAAAAGAGTGTC-ATGACGCATTCCAGTCACTTGAATATGAAGTGAATACCTTGCA 354
Query 52968 CAACTCTAATGGTCAGAGTCCATTTATTACCTTTGGTTTTGGTCTAGGAACTTCCTGGGA 53027
| | ||||||| || | || ||| ||||||||||||||||| |||| || |||||
Sbjct 355 TACCGCTAATGGCCAAACACCGTTTGTTACCTTTGGTTTTGGTTTAGGCGTGTCGTGGGA 414
Query 53028 AGCACGTCTAGTACAGAAAGCAGTACTGAAAGTACGCATGGATGGTTTAGGTATCAAT-- 53085
| ||| || | ||| || | | | | |||||| |||| |||||||||| |||
Sbjct 415 GTCGCGTTTAATTCAGCAATCGATGTTAACAGTACGTATGGCGGGTTTAGGTAAAAATCG 474
Query 53086 -AAACGTACAGCTATCTTCCCGAAACTGGTATTTGTACTTCGCGATGGCGTAAATATGAA 53144
||| ||||| |||| || ||| |||| |||| || |||||||| ||| ||
Sbjct 475 CAAA---ACAGCAGTCTTTCCAAAATTGGTGTTTGCCATTAAAGATGGCGTGAATCATAA 531
Query 53145 ACCAGGAGATGTTAATTATGACATCAAGAAG 53175
| | |||| ||||||||| || || |||
Sbjct 532 AGCGACTGATGCTAATTATGATATTAAAAAG 562
>seq506238
Length=275
Score = 102 bits (112), Expect = 6e-17
Identities = 127/172 (74%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 27067 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAACA 27126
||||||||||| | | ||||| | ||||||||| | || | || ||||| || ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 27127 GCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC- 27185
||||| || || ||||| || || || || |||||||||||||| ||||| |||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 27186 -CAAAAGCTGGTCACGGCTTAATACATTAACATTTAGGTGCTGACCACCTTC 27236
| || | | ||||| | ||| ||||| || |||| || |||||||||||
Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq351952
Length=416
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 27067 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAACA 27126
||||| ||||| | || || || | || |||||| ||| | | |||||||| ||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 27127 GCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATCC 27186
||||| || || ||||| || || || || ||||| || || |||| || | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 27187 AAAAGCTGGTCACGGCTTAATACATTAACATTTAGGTGCTGACCACCTTCGAT 27239
|| | | |||||| | | ||||||||| |||| ||| ||||||||||| ||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq155978
Length=1540
Score = 100 bits (110), Expect = 2e-16
Identities = 201/298 (67%), Gaps = 0/298 (0%)
Strand=Plus/Minus
Query 45191 TGAGTGTGCATACATGGACGTAAGCAACCTTTCGAGAACTCTCCAGGATTCCAGAAGGTT 45250
|| |||||||| || || ||||| || || | || || || || || | || |
Sbjct 1448 TGCGTGTGCATGCACGGGCGTAAACAGCCAAGCTCAAATTCGCCTGGGTTGTAAAAACTA 1389
Query 45251 AGAATTTCCCCACGATCATCAATGCCCTTCTTCAGGTTATGATAAATCTTGGCTAGTTGG 45310
| ||||| || ||||| || || || || || | ||||| | | || |||||||||
Sbjct 1388 ATTATTTCACCGCGATCGTCTATACCATTTTTTAAGTTATTAATTACTTTTGCTAGTTGG 1329
Query 45311 TCAAACATAAGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTCCC 45370
|| | | | ||||| | ||| ||| ||||| || ||||| || || |||
Sbjct 1328 TCTAGCGTTGAGCCATCTGGGCGCTGCCAAGCACGCCCTTGTACGCCATAAACACGGCCC 1269
Query 45371 ATATCATCCTCACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATTA 45430
|| || ||||||||||| || | ||||| | |||||||| ||||| ||||| ||
Sbjct 1268 ATGTCGTCCTCACCTTTACGGTGCGGATTATTAAGCCAAGCGCTATTTTCGTTTGCGTTT 1209
Query 45431 GCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAATCATACCCACGCA 45488
|||| ||| || ||| || || |||| || ||||| || ||| || |||||||
Sbjct 1208 GCATCCCAGGTTTTACAGCCTATTTCGCGAAACTGTGCCGCGCTATCGTAGCCACGCA 1151
>seq484804
Length=980
Score = 93.3 bits (102), Expect = 3e-14
Identities = 196/287 (68%), Gaps = 9/287 (3%)
Strand=Plus/Plus
Query 45263 CGATCATCAATGCCCTTC---TTCAGGTTATGATAAATCTTGGCTAGTTGGTCAAACATA 45319
||||||||||| || || |||| ||||| | ||| || || ||||||| ||
Sbjct 16 CGATCATCAATACCTTTTGGATTCAAGTTATCAACAATTTTTTTCAGCTGGTCAATGCTA 75
Query 45320 AGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTCCCATATCATCC 45379
|||||| | |||| ||| ||| ||||||| || || || || |||||||||||
Sbjct 76 CCACCATCAGGCTTAGCCCATGCACGGCCTTGAATCCCGTAAACGCGCCCCATATCATCT 135
Query 45380 TCACCTTTGCGAT--ATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATTAGCATTCC 45437
||||||||||| | ||| || | |||||||| ||| ||| |||||||||| ||
Sbjct 136 TCACCTTTGCGGTGAATG--TTATTAAGCCAAGCATCATTTAAATTGGCATTAGCATCCC 193
Query 45438 ATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAATCATACCCACGCAGATACCCAA 45497
| || ||| ||| | || || | || || ||||| ||||| | ||| ||||
Sbjct 194 AGGTTTTAGTACCTAGTTTACGAAAATCAGCGGCATTGTCATAACCACGGATATAACCAA 253
Query 45498 TCATTTCCATTATTGCTTGTTTTGCAAACGC-CTTACGAGTAGTAAT 45543
| | || || || || ||| ||| || |||||| ||||| ||
Sbjct 254 TAAACTCAGCAATCGC-TGACTTGAAAAAGCTCTTACGCGTAGTTAT 299
>seq521735
Length=281
Score = 87.8 bits (96), Expect = 1e-12
Identities = 113/155 (73%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 45349 TTGAACACCATAGACTCGTCCCATATCATCCTCACCTTTGCGATATGGATTGTCTAGCCA 45408
||| || || || || || ||||| ||||| | |||||||| | ||||| | |||
Sbjct 34 TTGCACGCCGTACACCCGACCCATGTCATCAACGCCTTTGCGGTGAGGATTACTAAACCA 93
Query 45409 AGCTAAGTTTTCATTTGCATTAGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGC 45468
|| | |||||| || || ||||||||||| || || |||||||| || || |||||
Sbjct 94 AGATTCGTTTTCGTTCGCGTTAGCATTCCACGTATTGCACCCAATAGCACGAAACTGTGC 153
Query 45469 TGCTGAATCATACCCACGCAGAT-ACCCAATCATT 45502
|| ||| || |||||||||| ||| ||| |||
Sbjct 154 CGCACTATCGTAACCACGCAGATAACCTAATAATT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345974702989508
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