Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq458775 87.8 3e-12
seq516804 84.2 4e-11
>seq458775
Length=389
Score = 87.8 bits (96), Expect = 3e-12
Identities = 99/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Plus
Query 170722 CGACCGGGCAGCGTTTTGCAGCCCAGCGATTCCCACGTTTTACGACCGAGGATAATCGGC 170781
||||| |||| || || ||||| ||| ||||| ||||||||||| | ||| ||||||
Sbjct 117 CGACCCGGCAACGG---GCGGCCCAACGAATCCCAGGTTTTACGACCCATGATGATCGGC 173
Query 170782 TTGCCGTAAGTTGCAGCCTTGAAATGCTTCAACTCTTCTGGAAAGTGCCACGGCATAGTA 170841
||||| | || | |||||||||| || || || | || || ||||||||||| |
Sbjct 174 TTGCCCAAGGTGGTGGCCTTGAAATATTTGAAATCCGCAGGCAAATGCCACGGCATGCTG 233
Query 170842 TTGTCG-CGCC 170851
|||||| ||||
Sbjct 234 TTGTCGACGCC 244
>seq516804
Length=734
Score = 84.2 bits (92), Expect = 4e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 23044 GTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACG 23103
|||||||| |||||| | ||| | |||| ||| || || || ||||||||||||
Sbjct 20 GTGGTATTACTAAACTCTAAAGTCACATGCCCTTCCCACTCAGGCTCAAGCGGCGTGACG 79
Query 23104 TTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCA 23163
|| ||||| || ||||| || ||||| || ||||| || || || || ||||| ||
Sbjct 80 TTGACGATAATACCGCAGCGGGCATAGGTTGATTTACCAAGACAAATCGTCAATACATCG 139
Query 23164 CGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222
|| ||||| ||| | |||| ||| ||| || || || ||| || ||||| ||
Sbjct 140 CGTGGAATACGGAAATATTCCATGGTGCGTGCTAGCGCAAACGAGTTTGGTGGAATAAT 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 891697509600160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |