Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_017975.1 Length=167292 Score E Sequences producing significant alignments: (Bits) Value seq484804 116 4e-21 >seq484804 Length=980 Score = 116 bits (128), Expect = 4e-21 Identities = 216/312 (69%), Gaps = 10/312 (3%) Strand=Plus/Plus Query 97130 CCCATATCATCTTCGCC---GCGACGAGACTCGTTAGCTAACCACGCTTCATTTAAGTTA 97186 |||||||||||||| || ||| | || | |||| | ||| || |||||||| || Sbjct 124 CCCATATCATCTTCACCTTTGCG--GTGAAT-GTTATTAAGCCAAGCATCATTTAAATTG 180 Query 97187 GCATTAGCATCCCAAGTTTTAGTTCCTAACTTACGGAAGTCTTCTGCGTTAGTGTAACCA 97246 |||||||||||||| |||||||| |||| ||||| || || | || || |||||| Sbjct 181 GCATTAGCATCCCAGGTTTTAGTACCTAGTTTACGAAAATCAGCGGCATTGTCATAACCA 240 Query 97247 CGAATGTAACCTAGTAGTTCGGCTACGGCTGCTTTCCAATAACTCTTACGTGTAGTAAGC 97306 || || ||||| | | || || | |||| || || | |||||||| ||||| | Sbjct 241 CGGATATAACCAATAAACTCAGCAATCGCTGACTTGAAAAAGCTCTTACGCGTAGTTATT 300 Query 97307 ATCGGTAGTATACCT--GCTTCAACATCATATTCCATGTTAGCACGTATAACAGTTAGGC 97364 | || | | | | || |||||| |||| | | |||| || || |||| | Sbjct 301 AATGGAA--ACTCGTTAGCACCAACATTGTATTGTAAATCAGCATTAATGACGGTTAAAC 358 Query 97365 AACGTTTACCTGTACGTTCATTATATACCCATTCACCTTCTTCTACAATACGACGACCTA 97424 |||||||||| |||||||| || | | ||| ||||| || | ||| || ||| || Sbjct 359 AACGTTTACCGGTACGTTCGTTTTCAATCCAAGTGCCTTCATCAATAATTCGTTGACATA 418 Query 97425 AGTCTAAATAAG 97436 | |||||||||| Sbjct 419 AATCTAAATAAG 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531690749579840