Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_017981.1
Length=49981
Score E
Sequences producing significant alignments: (Bits) Value
seq523693 127 7e-25
seq311730 98.7 3e-16
>seq523693
Length=695
Score = 127 bits (140), Expect = 7e-25
Identities = 225/327 (69%), Gaps = 6/327 (2%)
Strand=Plus/Minus
Query 25950 CATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCG-- 26007
|||||||||| | || | | ||| ||||||||||| ||||| || ||||
Sbjct 397 CATCTGCATGCTGCCACTCTGATCGACGACAATTTCAGTTGTGTACTTGTCTTGGCCGCT 338
Query 26008 -TCCTTTTCCCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTT 26066
| | || |||||| || || | || || || |||| |||||| || ||||||||
Sbjct 337 TTGGTCTTTCCACTTACGTGTCTGCAATTTACCTTCAAGGTAAACTTGCGAACCTTTACG 278
Query 26067 CAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGT 26126
||||||||| ||| ||| || |||| |||||| |||| ||| ||||| ||||| || ||
Sbjct 277 CAGGTACTCAGCCGTGATTTCAGCTAACTTGCCGAACATCACCACGCGGTGCCACTCGGT 218
Query 26127 CACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAAT 26186
||||| | || || ||| | || ||||| ||| ||| || | ||||||
Sbjct 217 ACGTTCTTGTTGTTGACC---CTGTTGGTCTTTCCAAGATTCGCTGGTAGCAAGGGTAAT 161
Query 26187 GTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACC 26246
||||| || || |||||| ||||| ||||| | || ||||| | || | || ||
Sbjct 160 ATTGGCCACGGCATTGCCATTTGGCATATAACGCACTTCGGGATCTTGGCCTAAATTGCC 101
Query 26247 GACAAGGATTACTTTATTTACGCCGCG 26273
||| | || ||||| || || || ||
Sbjct 100 GACTAATATGACTTTGTTAACACCACG 74
>seq311730
Length=9896
Score = 98.7 bits (108), Expect = 3e-16
Identities = 180/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 26016 CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTT-CTTCAGGTACT 26074
||| || || |||| |||| || |||| |||| ||||||||||| | || || |
Sbjct 2753 CCATTTACGTGTTTGAAGTTTACCTTCAACATAAATTTGTGAACCTTTACGGCA-ATATT 2811
Query 26075 CGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTT 26134
| || | || || |||| ||||||||| | || || || ||||| || || ||
Sbjct 2812 CACCAACAATTTCTGCTAACTTGCCAAAAAATACCACACGGTGCCACTCAGTTTTATCAA 2871
Query 26135 TCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGA 26194
| ||| ||| || | || || || |||| ||||| || |||| ||| || || || |
Sbjct 2872 CCATTTGGCCAGTGTTTTTGTCTTTGTAGCTATCTGAAGTTGCTAAGGTGATATTTGCTA 2931
Query 26195 CTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGA 26254
| || ||| |||||||| ||||| | || ||||| | || | ||||| || | |
Sbjct 2932 CACCGTTGCCGTTAGGCATATAACGTACTTCAGGATCTTGTCCTAAATTACCAACCAAAA 2991
Query 26255 TTACTTTATTTACGCCGCGTG 26275
||||||| || || |||||||
Sbjct 2992 TTACTTTGTTCACACCGCGTG 3012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 158820284437332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |