Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_017984.1
Length=46387
Score E
Sequences producing significant alignments: (Bits) Value
seq478798 89.7 2e-13
seq293393 86.0 2e-12
>seq478798
Length=459
Score = 89.7 bits (98), Expect = 2e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 41758 GCTTTAGCTAAAGAGTTTGATTGCCCTGTTTTCTGTTTATCGCAGTTAAGCCGAAAGGTT 41817
|| |||||||||||||| |||||| ||| | ||||| ||||||| ||| ||
Sbjct 293 GCATTAGCTAAAGAGTTACGTTGCCCGGTTATTGCCTTATCTCAGTTAAACCGTGGTCTT 352
Query 41818 GAGGATAGAGCAGATAAGCGCCCAATGATGAGTGATTTGCGTGAATCTGGCCAAATCGAA 41877
||| | | || ||||||||||| || | || || |||||||| ||| || ||
Sbjct 353 GAGCAACGTGCTGATAAGCGCCCTATTAACTCAGACTTACGTGAATCAGGCGCGATTGAG 412
Query 41878 CAAGATGCCAATACGATTTTATTTATTTATCGTGATGAGGTTTA 41921
|||||||| || ||| | ||||||||||| ||||| |||||
Sbjct 413 CAAGATGCTGATTTAATTATGTTTATTTATCGAGATGAAGTTTA 456
>seq293393
Length=3342
Score = 86.0 bits (94), Expect = 2e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 41816 TTGAGGATAGAGCAGATAAGCGCCCAATGATGAGTGATTTGCGTGAATCTGGCCAAATCG 41875
||||| | | || |||||||| ||||| | ||||| ||||| || ||| || |
Sbjct 3341 TTGAGCAACGTGCCGATAAGCGTCCAATTAACTCAGATTTACGTGAGTCGGGCTCTATTG 3282
Query 41876 AACAAGATGCCAATACGATTTTATTTATTTATCGTGATGAGGTTTACAACAAACAAAGTA 41935
| ||||||||| || || | ||||||||||||||||| || |||||| || | ||||
Sbjct 3281 AGCAAGATGCCGATTTAATCATGTTTATTTATCGTGATGAAGTGTACAACGAAGACAGTA 3222
Query 41936 AAGATATTGGGATTGCTGAAATTAT 41960
|||| || ||||| ||||| ||
Sbjct 3221 CCGATAAAGGTATTGCCGAAATAAT 3197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147391253296476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |