Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq449735 122 9e-23 seq386449 105 7e-18 >seq449735 Length=3187 Score = 122 bits (134), Expect = 9e-23 Identities = 412/635 (65%), Gaps = 24/635 (4%) Strand=Plus/Minus Query 141585 GTATAAACGAGCAGTATTTGCACGTTCTGTCATGAATAAACCCATA-AACAACTCGGTTG 141643 ||| | |||| | ||| ||||||||||| || |||| | |||| || | | Sbjct 654 GTAAATACGACCGGTACTTGCACGTTCT----TGCGCAAACATTGAGAACAGTTCAATAG 599 Query 141644 CTTTAATACGTTTTTTACGTACAAACGGGTCCTTTTCTAAATTTTCATATAATTCACGGA 141703 ||||||| ||||||||||| | | ||| | ||| | ||| |||| | | | Sbjct 598 CTTTAATGCGTTTTTTACGAATTGATTCGTCTTGTTCGTATTTTACATAAAGCGCGTCAA 539 Query 141704 ACAGATTTTCATCTCGGAAGAATGCATCATAAAGTTTACCCTCTAGTACATCCG---GGC 141760 || | || ||| || |||||||| ||||| || | ||||| | ||| Sbjct 538 ACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAGGC------CTGGCACATCAGAGGGGC 485 Query 141761 TAAACAATGTAACATAATCATCCATTAAATA---GCGTTCAATCATTAAATTGTTTAATT 141817 ||||||| |||| || || || |||| || ||| | ||||| || || || | Sbjct 484 TAAACAAGGTAATGTAGTCGTCT-TTAATTAAACGCGAGTA--CATTAGTTTATTAAACT 428 Query 141818 GAATACCATAATCCATATGACGAATACGGTTTTCTTCAATGCCCTTATTGTTCTTAAGAA 141877 | | || ||||| | |||||| | ||||| || |||| || || || ||||| | Sbjct 427 GTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTA 368 Query 141878 CCATAAGGTTTTCACATTCTAAATGCCAAATAGGCCAGTACGCAGTAGCAGAACCTTTAC 141937 | | |||||||| |||||||||||||| || || || || || | || || Sbjct 367 CTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCAC 308 Query 141938 GAATACCACCTTGAGAACATGAATGGACCGCTGCATTTTTAAGT--TTCCAAAATGGTGT 141995 | | ||| ||||| ||||| | ||||||| ||| |||| || |||| || | Sbjct 307 GTACACCGCCTTGCGAACAGCTTTTAACCGCTG--TTTGAAAGTGCTTATAAAAAGGAAT 250 Query 141996 TACACCAGTGTGTTTAACTTCACCTGGACCAATTTTAGACCCTTCGGCACGGATTGCACC 142055 ||| || || | |||| || | ||| | || ||||| || ||| Sbjct 249 ACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACC 190 Query 142056 ACCGCCGATACCAATACCAGCACGTTTAGAAACATATTTTACAATAGCTGATGTACTTTC 142115 || || ||||| || ||||||| || || ||||| ||||| || || | | | Sbjct 189 TGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGC 130 Query 142116 AGTAATTGAATCTAGGCTATCGCCGGTTTCAATTAAAACACATGAACTAAATTGACGAGT 142175 |||||||||| ||||| ||||| || ||||| ||||| || ||||| || || || Sbjct 129 GTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGT 70 Query 142176 TGGGGTACGAACACCGGCAAGAATAGGAGTAGGTA 142210 ||| ||||||||||| || | ||| || ||||||| Sbjct 69 TGGCGTACGAACACCTGCCATAATTGGCGTAGGTA 35 >seq386449 Length=539 Score = 105 bits (116), Expect = 7e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 |||||||||| ||||||||||||||||| ||| | ||||||||||| | |||||||||| Sbjct 70 TGGTGGGCCTTCCCAGACTTGAACTGGGGACCTGCCGATTATGAGTCGGATGCTCTAACC 129 Query 76005 AATTGAGCTAAAGGCCCA 76022 || ||||||||||||||| Sbjct 130 AACTGAGCTAAAGGCCCA 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529767466728240