Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_018087.3
Length=166687
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 122 9e-23
seq386449 105 7e-18
>seq449735
Length=3187
Score = 122 bits (134), Expect = 9e-23
Identities = 412/635 (65%), Gaps = 24/635 (4%)
Strand=Plus/Minus
Query 141585 GTATAAACGAGCAGTATTTGCACGTTCTGTCATGAATAAACCCATA-AACAACTCGGTTG 141643
||| | |||| | ||| ||||||||||| || |||| | |||| || | |
Sbjct 654 GTAAATACGACCGGTACTTGCACGTTCT----TGCGCAAACATTGAGAACAGTTCAATAG 599
Query 141644 CTTTAATACGTTTTTTACGTACAAACGGGTCCTTTTCTAAATTTTCATATAATTCACGGA 141703
||||||| ||||||||||| | | ||| | ||| | ||| |||| | | |
Sbjct 598 CTTTAATGCGTTTTTTACGAATTGATTCGTCTTGTTCGTATTTTACATAAAGCGCGTCAA 539
Query 141704 ACAGATTTTCATCTCGGAAGAATGCATCATAAAGTTTACCCTCTAGTACATCCG---GGC 141760
|| | || ||| || |||||||| ||||| || | ||||| | |||
Sbjct 538 ACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAGGC------CTGGCACATCAGAGGGGC 485
Query 141761 TAAACAATGTAACATAATCATCCATTAAATA---GCGTTCAATCATTAAATTGTTTAATT 141817
||||||| |||| || || || |||| || ||| | ||||| || || || |
Sbjct 484 TAAACAAGGTAATGTAGTCGTCT-TTAATTAAACGCGAGTA--CATTAGTTTATTAAACT 428
Query 141818 GAATACCATAATCCATATGACGAATACGGTTTTCTTCAATGCCCTTATTGTTCTTAAGAA 141877
| | || ||||| | |||||| | ||||| || |||| || || || ||||| |
Sbjct 427 GTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTA 368
Query 141878 CCATAAGGTTTTCACATTCTAAATGCCAAATAGGCCAGTACGCAGTAGCAGAACCTTTAC 141937
| | |||||||| |||||||||||||| || || || || || | || ||
Sbjct 367 CTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCAC 308
Query 141938 GAATACCACCTTGAGAACATGAATGGACCGCTGCATTTTTAAGT--TTCCAAAATGGTGT 141995
| | ||| ||||| ||||| | ||||||| ||| |||| || |||| || |
Sbjct 307 GTACACCGCCTTGCGAACAGCTTTTAACCGCTG--TTTGAAAGTGCTTATAAAAAGGAAT 250
Query 141996 TACACCAGTGTGTTTAACTTCACCTGGACCAATTTTAGACCCTTCGGCACGGATTGCACC 142055
||| || || | |||| || | ||| | || ||||| || |||
Sbjct 249 ACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACC 190
Query 142056 ACCGCCGATACCAATACCAGCACGTTTAGAAACATATTTTACAATAGCTGATGTACTTTC 142115
|| || ||||| || ||||||| || || ||||| ||||| || || | | |
Sbjct 189 TGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGC 130
Query 142116 AGTAATTGAATCTAGGCTATCGCCGGTTTCAATTAAAACACATGAACTAAATTGACGAGT 142175
|||||||||| ||||| ||||| || ||||| ||||| || ||||| || || ||
Sbjct 129 GTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGT 70
Query 142176 TGGGGTACGAACACCGGCAAGAATAGGAGTAGGTA 142210
||| ||||||||||| || | ||| || |||||||
Sbjct 69 TGGCGTACGAACACCTGCCATAATTGGCGTAGGTA 35
>seq386449
Length=539
Score = 105 bits (116), Expect = 7e-18
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004
|||||||||| ||||||||||||||||| ||| | ||||||||||| | ||||||||||
Sbjct 70 TGGTGGGCCTTCCCAGACTTGAACTGGGGACCTGCCGATTATGAGTCGGATGCTCTAACC 129
Query 76005 AATTGAGCTAAAGGCCCA 76022
|| |||||||||||||||
Sbjct 130 AACTGAGCTAAAGGCCCA 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529767466728240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |