Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq477953 93.3 1e-14 seq445849 84.2 7e-12 >seq477953 Length=379 Score = 93.3 bits (102), Expect = 1e-14 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 47100 CCACCGTCGAGCTCTCTCCAGTTGCTGGACGAAACGTTCTCGGTATCCGGGATGGAATCA 47159 |||||||||| |||||| || |||||||||||||||||| | ||| ||| |||||| | Sbjct 1 CCACCGTCGAACTCTCTACAACTGCTGGACGAAACGTTCTTGCCATCAGGGCTGGAATAA 60 Query 47160 TCAGCGACCAAGCAGCACTGAGAACGCTTCAGGA 47193 ||| |||||||| || |||| | || ||||||| Sbjct 61 TCAAGGACCAAGCTGCGCTGAAAGCGTTTCAGGA 94 >seq445849 Length=1010 Score = 84.2 bits (92), Expect = 7e-12 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 31188 GTAGTTTGTCCATTCTTTCTTTTTTGTCTGGCGGTCGTAATACTGGACGCCAGCACGAAT 31247 |||||||||||||||||| | ||||||| |||||| ||||| || || || |||| Sbjct 266 GTAGTTTGTCCATTCTTTTTGCTTTGTCTCGCGGTCATAATATTGAACACCTAAGCGAAC 207 Query 31248 GTTGAATCCGATATTTTCTCCAGCCTGAAACTCTCTTGCTGGCTTGTTTAGTCGTACAGT 31307 | || || || | || ||||| ||||| | | |||||| ||||||| | | || Sbjct 206 GCCAAAACCTGTACTGTCGCCAGCTTGAAATTGTGTTGCTGCTTTGTTTAATTTACCCGT 147 Query 31308 GATTGAATGTGCCATT 31323 | ||||||||||||| Sbjct 146 TACTGAATGTGCCATT 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156069557688072