Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq6427 87.8 1e-12
seq59939 84.2 2e-11
>seq6427
Length=3314
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | ||| ||||| || || || || || ||||| |||| |
Sbjct 3108 CCGCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3167
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||||| || ||||| |||| | ||| ||||| || |||
Sbjct 3168 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3227
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || || || || ||| |||| | ||||| | || ||
Sbjct 3228 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACC 3287
Query 101423 TCAAGAGTGACCGTTTTGCCGGT 101445
|| || |||| || ||||| ||
Sbjct 3288 TCCAGGGTGATGGTCTTGCCCGT 3310
>seq59939
Length=800
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372
|||| |||| ||||| || ||||| |||| | ||| ||||| || ||||||||||| |
Sbjct 9 CATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCT 68
Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432
| || || || || || ||| |||| | |||||| | || || || || ||||
Sbjct 69 TGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGA 128
Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473
|| ||||| || | || || ||||| ||||||||| ||
Sbjct 129 TGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTT 169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 393740412944214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |