Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_018837.1
Length=122024
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 150 1e-31
seq466100 145 6e-30
seq507483 136 3e-27
seq511551 111 1e-19
seq508595 96.9 3e-15
seq507581 84.2 2e-11
>seq426744
Length=341
Score = 150 bits (166), Expect = 1e-31
Identities = 219/307 (71%), Gaps = 7/307 (2%)
Strand=Plus/Plus
Query 101822 GCTGCGTAGGTACCAGAAACAATACCGTT---TTCAAAGTAACGCTGCAGGTTAACACGC 101878
|||||||| ||||||| ||| ||||| || | ||| ||| || ||||||| |||
Sbjct 37 GCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGTTAAGACGT 96
Query 101879 TGAGTAACGTAGTATGCATCACGCTGTTCAGAAGCACGACGTTCTTTCTCAACAGTTACC 101938
||||| ||||||||||||||||| || | | ||| |||| || || || || |
Sbjct 97 TGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTACTGTAATA 156
Query 101939 GCACGCTGACGTGGAACAACGAAGTTTTCACGATAAGCGAT--GAAGCAATAAGGAGCTT 101996
| ||| ||||| |||||||||||||| ||||| ||| |||| | ||| || ||
Sbjct 157 GTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATTCTGAACT- 215
Query 101997 CAGCAGCCTTATCTGGGAAGTACTCAGAAACAACAACCGGCATACCATAAATACGACCAA 102056
|||| ||| |||||||||| | |||||| | ||| | | ||| || ||||||||||
Sbjct 216 -GACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATACGACCAA 274
Query 102057 CCTGACCTTGCAGTTTGATAGCATCAGCAGCAGCAACCTGAGATACGTCTTGGAATTCTT 102116
| || ||||| ||||| | | | | | ||| |||| || || || || ||||||
Sbjct 275 CTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGCCATTCTT 334
Query 102117 CGTCTTC 102123
| |||||
Sbjct 335 CATCTTC 341
>seq466100
Length=556
Score = 145 bits (160), Expect = 6e-30
Identities = 140/180 (78%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 102560 TCTGGTTCAACCATCATTGTCAGCAACTTGCTGGACATTGGCAGTTCTTCGAACAGAGAA 102619
||||| |||| |||||| || || | ||| || | |||||| || |||||||| | |
Sbjct 6 TCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTTA 65
Query 102620 CCAACGATCAGTTCCTTCTGCAGATCACGCAGGATACGCAGGGAGAAAATTGTTTCGTAG 102679
|| || | || | |||||||| |||||| |||||||| | |||||||| || ||||||
Sbjct 66 CCTACAACCATTAACTTCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTCGTAG 125
Query 102680 TTTTCAGTTGAAACTTCGATAGAAGAAGATGCGTTTACAGCTTTAGCGTGAGCTTCACCA 102739
|| ||| | |||||||||||| ||| |||||| ||||||||| |||||||||||||
Sbjct 126 TTCTCACTAGAAACTTCGATACTTGAACTTGCGTTCACAGCTTTAAGGTGAGCTTCACCA 185
>seq507483
Length=1083
Score = 136 bits (150), Expect = 3e-27
Identities = 475/723 (66%), Gaps = 29/723 (4%)
Strand=Plus/Plus
Query 71091 ACTTATGTTAATAAGATGCTGCTTAACATAGACTCAGATGGGTGTATTAGAACAGGTTTC 71150
|||||||| | ||||||| | ||||| ||| |||||| | | | ||||| ||
Sbjct 345 ACTTATGTAATTAAGATGTTAGACAACATTGACCGAGATGGTCATTTACGTACAGGGTTT 404
Query 71151 CACGAGCATATGACTACTTCTGGTAGACTTAGCTCATCTGGTAAGCTGAACTTACAGCAG 71210
| | || | ||| ||||| ||| | || || ||||| || || || |||||||||||
Sbjct 405 AGCCAACACACGACCACTTCGGGTCGTCTAAGTTCATCAGGCAAACTTAACTTACAGCAA 464
Query 71211 CTTCCTAGAGATGAATCTATTATTAAGGGGTGCATTGTTGCTCCAGAAGGTTACCGAGTA 71270
|||||| | ||||| |||| ||||||| || ||||| ||||| | || || |||||
Sbjct 465 CTTCCTCGTGATGATGCTATGGTTAAGGGATGTATTGTAGCTCCTGCGGGCTATAGAGTA 524
Query 71271 ATTTCTTGGGACTTAACAACTGCGGAAGTATATTATGCTGCCGTATTATCTGGAGAT-AG 71329
| | ||| | |||||||||| | | || || | | | ||| ||| |
Sbjct 525 GTAGCCGTGGATATGGAAACTGCGGAAATGTGGGTAGCAGCAGCACTTAGTGGGGATAAA 584
Query 71330 AGAGCTTCAACAAGTCTTTATTAAC-AT---GCAGA-ATGACCCTGAAAACTACTCGGAC 71384
||| || || |||| || ||||| || || || | | | | | || | |||
Sbjct 585 AGACCTACAGAAAGTGTT--TTAACGATATGGCTGACAAGTCTATTGTATCT--GCCGAC 640
Query 71385 TTCCACGGTAGTATAGCGCACTCAGTATTTGGTCTAACATGT-AAGCCAACTGATGTTAA 71443
|||||| | ||| || ||| || || | || ||| ||| | ||| ||||
Sbjct 641 TTCCACAGCTCTATTGCACACATGGTGTTCAAGCCAAACTGTCTAGCGCA-TGA-ATTAA 698
Query 71444 GAAGCTA--TTCCCTGCCTTACGTCAAGCAGCTAAAGCTATCTCCTTTGGTATCCTGTAC 71501
|||||| |||||||| |||||||| || |||||||||| || || ||||| || | |
Sbjct 699 -AAGCTATGTTCCCTGCATTACGTCAGGCTTCTAAAGCTATTTCATTCGGTATTCTATTC 757
Query 71502 GGTTCAGGTAAGGCTAAAGTTGCAGCTTCTGTAAACGAAGCTCTACTAGAACAGAGTATT 71561
||| || ||||| || |||| ||| | || || | ||| | || || | |
Sbjct 758 GGTAGTGGACCAGCTAAGGTAGCAGAATCTATTAATGAGTCGCTATTTGAGCAACATGTA 817
Query 71562 AAAACAGGTGAGCCTTATAAAGAGTGTACTCCTGCTGA---TGCTCAAGGGTATATTGAT 71618
|| || ||| |||| | || || | | || ||| ||| || ||||||
Sbjct 818 AAGACGGGTTGCCCTT---ACGAACCTATTGATAAAGAAACAGCTAAAGATTACATTGAT 874
Query 71619 ACTTACTTTACGAGATTCCCACGCCTTAAGAAGTGGATTGCACAATCTCACGACCAGATT 71678
|||||||| | ||||| ||| || ||||||| || || || ||||||
Sbjct 875 GTTTACTTTAGTCGTTTCCCTGACCTGAAACGTTGGATTGACGCGTCCCATGAGCAGATT 934
Query 71679 AAAGATTTTGGGTTTATCTATAGTCACTTTGGTCGTAAACGCAGACTGCACAATATCAAC 71738
| | ||||||||| ||||| ||||| || |||||||| ||||| | |||||| |
Sbjct 935 CTACAGCATGGGTTTATTTATAGCCACTTCGGACGTAAACGTAGACTACGTAATATCCGC 994
Query 71739 TCTGAGGATAGAG-GA--GTTCAGGGAGAAGAAATT-CGTTCTGGATTCAATGCTATTAT 71794
|| | | ||||| || ||| || ||||| || ||||| || ||||| ||||| ||
Sbjct 995 TCAGCGTCTAGAGAGACTGTT---GGTGAAGAGCTTACGTTCAGGCTTCAACGCTATCAT 1051
Query 71795 TCA 71797
|||
Sbjct 1052 TCA 1054
>seq511551
Length=634
Score = 111 bits (122), Expect = 1e-19
Identities = 212/310 (68%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 54083 AATGGTCAGACCCCATTTATTACATTCGGATTTGGTCTGGGAGAATCTTGGGAGTCTAGA 54142
||||| || | ||| ||| ||| | || |||||| | || | |||||||||||
Sbjct 101 AATGGACAAAGCCCCTTTTGTACGGTAGGTTTTGGTTTAGGTACTTGTTGGGAGTCTAAG 160
Query 54143 CTAATCCAAAGATCTATTCTAGAAGTCCGTATGAAAGGTCTAGGAGCAGACAAACGTACA 54202
||||| || | ||| || || || || ||||| ||||| |||| ||| || | |||
Sbjct 161 CTAATTCAGAAATCCATCCTTGAGGTGCGTATTAAAGGCTTAGGTGCATCAAAGAGGACA 220
Query 54203 GCTATTTTTCCTAAGCTGGTGTTTGCATTGAAACCTGGTCTCAATATGCAAGCAGGA-GA 54261
|| | || |||||||| | | | | ||| ||| |||| | || ||||| ||
Sbjct 221 GCGGTATTCCCTAAGCTTATCCTAACTATTAAAGACGGTGTCAACTTTAAA-CAGGAAGA 279
Query 54262 TCCTAACTACGACATTAAACAGTTAGCTATTAAATGTACTTCTGAGCGTATTTACCCTGA 54321
|| ||||| | ||||||||||||||| | | ||| | | ||||||| ||||||||
Sbjct 280 CCCAAACTATAATATTAAACAGTTAGCTCTAGAGTGTGCCAGTAAGCGTATGTACCCTGA 339
Query 54322 CTACGTGAGTTATGATAAGGTTGTGGAAGTTACGGGAGACTTTAAGTTCCCTATGGGTTG 54381
| | || |||||| |||| || ||||| || | |||||| ||||| ||
Sbjct 340 TATTATCAACTACGATAAGATTGTAGAGGTTACTGGTGGTTTTAAGGCAAGCATGGGCTG 399
Query 54382 CAGGAGCTTC 54391
||||||||||
Sbjct 400 CAGGAGCTTC 409
>seq508595
Length=419
Score = 96.9 bits (106), Expect = 3e-15
Identities = 83/100 (83%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 30685 AAACATACAAACTCCTAAATTTGGTGCGGGATGAGGGAGTCGAACCCTCGTCTACTGGGT 30744
||||||| | ||| || | |||||||| || || || |||||| || ||||||||||
Sbjct 374 AAACATAAATCCTC-TATAGCTGGTGCGGAATTAGAGATTCGAACTCTAATCTACTGGGT 316
Query 30745 GGAAGCCAGTTATTCTAGCCACTGAACTAATCACGCATAA 30784
||||||||||||||||| ||| |||||||||| |||||||
Sbjct 315 GGAAGCCAGTTATTCTA-CCATTGAACTAATCCCGCATAA 277
>seq507581
Length=941
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 102347 TCAATTGCGATTGCATGAGCTTCGATCAGACGACGACGCATGATTGGAAGCAGAGTAAAG 102406
|| ||| || | ||||||||||| | || | |||| | ||| |||| |||| ||
Sbjct 795 TCCATTTCGTTAGCATGAGCTTCAACAAGGTGTTGACGTAAGATAGGAACTAGAGAAAGA 854
Query 102407 ATAGCATCTTCTTCTGTTTCATCAGTCATGTAAGCCTTAGCAGCCAGTTTGAAAGT 102462
|||| |||||| || ||||| || || | ||||| ||||||||| |||||||||||
Sbjct 855 ATAGTATCTTCATCAGTTTCTTCTGTTAAGTAAGACTTAGCAGCTAGTTTGAAAGT 910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 387851968902670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |