Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq449735 235 4e-57 seq353462 116 2e-21 seq497288 95.1 8e-15 seq504168 93.3 3e-14 seq517074 84.2 1e-11 >seq449735 Length=3187 Score = 235 bits (260), Expect = 4e-57 Identities = 687/1045 (66%), Gaps = 20/1045 (2%) Strand=Plus/Plus Query 68459 TCTCTGCCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTGC 68518 || || || |||||||||||||| || || || || || || |||||||| | || Sbjct 31 TCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGCTCGTGT 90 Query 68519 GTGCTGATTGAAGCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCATC 68578 || | || || || || || || | |||| ||| | || || ||||| | Sbjct 91 GTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCAATTGTT 150 Query 68579 GACTACGTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGGC 68638 | ||||| || | || || |||||||| ||| | || || | ||||| ||||| Sbjct 151 AAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCACTGGGT 210 Query 68639 AGTGAGATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACTTC 68698 || | || ||||||||||| || ||| || || | |||| || || ||||| Sbjct 211 AGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAGCACTTT 270 Query 68699 CAGACGGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTTC 68758 || || ||||| ||| ||| || || |||||||| || |||||||| || || |||| Sbjct 271 CAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAACCTTGTTC 330 Query 68759 TATCCGATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCATT 68818 || ||| | ||||| || ||||| |||| ||| | || || ||||| ||||| || || Sbjct 331 TACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGCGGGGTT 390 Query 68819 GAAGAGAACCGCGTTCGTCATCTCGACTATGGCGTGATGATCAACCGTCTGATGTA-TCG 68877 || || |||||||| |||||| | || || ||||| | | || || ||||| ||| Sbjct 391 GATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATGTACTCG 450 Query 68878 CCGCCTGGTGCGCAACGAAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTA 68937 || | | |||| ||||||| |||| ||||| |||||||| ||||| || Sbjct 451 -CGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATGTGCCAGGCCTTTA 509 Query 68938 CGACGCGTTCTTTGTTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGA 68997 ||| || || |||| || || ||| |||| || | ||| || | || |||||| || Sbjct 510 CGATGCATTTTTTGAAGACCAAGACGAGTTTGACGCGCTTTATGTAAAATACGAACAAGA 569 Query 68998 CGAGAGCATCCGTAAGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGA 69057 ||| || ||||| ||| || || | || |||||||| | | | ||| || Sbjct 570 CGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCTCAATGTTTGCGCAAGA 629 Query 69058 GCGTGCCTCCACTGGTCGTGTTTATATTGCCAACGTCGACCACATGAACGATCACGGCGC 69117 ||||| || |||||| |||| | ||||| |||||| || ||| || | Sbjct 630 ACGTGCAAGTACCGGTCGTATTTACTTACAAAACGTTGACCACTGTAATACGCACAGCCC 689 Query 69118 ATTCGTTCCGGAAATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACC 69177 ||| || | || | ||||| | | ||| || ||| | ||| | || || | |||| Sbjct 690 GTTCATTGCTAAAGTGGCACCTATTCGCCAATCTAATTTATGTTTAGAAATTGCATTACC 749 Query 69178 GACCAAGCCACTGG----CGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCC 69233 || ||||| ||| ||| || ||||| ||| || ||||| ||||| || || | Sbjct 750 AACTAAGCCGTTGGATAACGTAAAC-GACGA--AGAA-GGCGAAATTGCGCTATGTACAC 805 Query 69234 TGTCTGCGTTCAACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGC---GT 69290 | ||||| || ||| | || || || | || || ||| |||| |||| | Sbjct 806 TCTCTGCATTTAACTTAGGGGCTATTGAGTCACTAGATGAACTTGAAGAATTGGCTGAGC 865 Query 69291 TTTACGCTGTGGCGGCACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTG 69350 || ||||| || | || | || || | ||| |||||||| | | |||| Sbjct 866 TT---GCTGTACGCGCTTTAGATAACTTACTTGATTTTCAAGACTACCCAGTACCGGCTG 922 Query 69351 CAGAAATCCCGGCTAAAGCTCGT-CGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTAC 69409 || |||| || ||| | |||| |||| ||| || || ||||| | |||| || ||| Sbjct 923 CAAAAATGCC-ACTATGGGTCGTACGTACTCTAGGAATAGGCGTAATTAACTACGCATAC 981 Query 69410 TATCTGGCGAAGAACGGCTTTAACTACTCTGAC-GCTGCGGGCAACCAGCTGGTGCATGA 69468 || || ||||| ||||| || || || ||| || ||| | || || ||| | Sbjct 982 TACCTAGCGAAAAACGGTAAGAAATATTCAGACGGCAGCGCAAATGCA-CTAACGCACAA 1040 Query 69469 GACCTTCGAAGCCATTCAGTACTAC 69493 || || ||||| ||||| |||||| Sbjct 1041 AACATTTGAAGCGATTCAATACTAC 1065 >seq353462 Length=332 Score = 116 bits (128), Expect = 2e-21 Identities = 195/279 (70%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 70333 GTCAACGTAGCACGCTACGATCAGCAAAAGTACCGTGACTTCGAAAAGCTGATTGAAAAA 70392 |||||||| || || ||||| || |||||| ||| | ||| || | |||||||||| Sbjct 277 GTCAACGTGGCGCGTTACGACCAACAAAAGCACCCTATCTTTGAGCAATTGATTGAAAAG 218 Query 70393 CAACTTTCGTTCTTCTGGCGCCCTGAAGAAGTCGACATTACCAC-TGACCGCATCGACTT 70451 ||||| |||||||| ||||| || ||||||||||| || ||| ||| || || || | Sbjct 217 CAACTGTCGTTCTTTTGGCGTCCAGAAGAAGTCGA-TGTATCACGTGATCGTATGGATT- 160 Query 70452 CAATACCAAGCTGCAAGAGCACGAGCGCCATATTTTCCTGAGCAACCTGCGTTACCAGAC 70511 || ||| || ||||| | ||||| || | || ||||| || || || Sbjct 159 --ATGGCAATTTGTCCTCACACGAACAGCATATCTTTATCAGTAACCTAAAGTATCAAAC 102 Query 70512 GCTGTTGGATTCCGTTCAGGGTCGCAGTCCTAACGCAACACTGCTGCCGCTGATCTCCAT 70571 ||| | || || | || ||||| || || |||| || |||| || | || || Sbjct 101 GCTACTCGACTCTATCCAAGGTCGTAGCCCAAACGTGGTGCTATTGCCATTGGTATCGAT 42 Query 70572 TCCTGAGCTGGAGACATGGGTCGAGACCTGGTCGTTCTC 70610 ||||||||| ||||||||| | ||||| ||| |||| || Sbjct 41 TCCTGAGCTTGAGACATGGATTGAGACGTGGACGTTTTC 3 >seq497288 Length=389 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 70480 CATATTTTCCTGAGCAACCTGCGTTACCAGACGCTGTTGGATTCCGTTCAGGGTCGCAGT 70539 ||||| || | || ||||| || ||||| || | || || | || ||||| || Sbjct 343 CATATCTTTATCAGTAACCTAAAGTATCAGACCCTACTCGACTCTATCCAAGGTCGTAGC 284 Query 70540 CCTAACGCAACACTGCTGCCGCTGATCTCCATTCCTGAGCTGGAGACATGGGTCGAGACC 70599 || |||| || |||||||| | || ||||||||||| || || ||| | ||||| Sbjct 283 CCAAACGTGGTGCTATTGCCGCTGGTGTCTATTCCTGAGCTTGAAACGTGGATTGAGACG 224 Query 70600 TGGTCGTTCTCCGAGACGATTCACAGCCGCAGCTATACGCACATTATCCGCGGTATGGTG 70659 ||| |||| || ||||| |||||| ||||||||||| || || || || ||| | Sbjct 223 TGGACGTTTTCTGAGACCATTCACTCGCGCAGCTATACCCATATCATTCGTAATATTATC 164 Query 70660 GATGACCCTAGCATCGTTTTCGACGGCATC 70689 |||||||| ||||| || || | |||| Sbjct 163 AATGACCCTGCTATCGTCTTTGATGACATC 134 >seq504168 Length=536 Score = 93.3 bits (102), Expect = 3e-14 Identities = 186/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 69791 AAAGACGGCATCGTGAAGATGGTCGTTCCAGACTTCGCTCAACTGAAAGACCAGTACGAG 69850 || ||||||||| | ||| ||||| || || | | | || ||| | ||||| ||| Sbjct 1 AAGGACGGCATCCTAAAGCAAGTCGTGCCTGAGATTGACAAGCTAAAAAATCAGTATGAG 60 Query 69851 TACCTGTGGGATATGCCGGATAACCGCGGCTATCT--GACTAAGGTGGCCATCATTCAGA 69908 || ||| | ||||| | || ||| || || | || ||| || |||| |||| Sbjct 61 CTACTATGGCAAATGCCAAACAATGACGGTTACCTACGGCT--GGTCGCTGTCATGCAGA 118 Query 69909 AGTTCTTCGATCAGGCCATCTCTGCGAACACCAACTACGACCCGACTCGCTTCCCTGGCG 69968 | ||| ||||||| |||||||| || ||||||||||| || ||| | |||| | Sbjct 119 AATTCGTCGATCAAAGTATCTCTGCCAATACCAACTACGATCCTGTTCGTTATGCTGGTG 178 Query 69969 ACAAGGTTCCAATGATGAAGCTGCTGGAAGATCTGCTGTTTGCGTATCAGCAAGGTGTGA 70028 | || || |||| || |||| |||| |||| || ||| || ||||||| Sbjct 179 GCCGTGTACCGATGAAGATATTGCTAAAAGACTTGCTAAACGCTTATAAGATGGGTGTGA 238 Query 70029 AGACGCTTTATTACCACAACACGCGTGATGGCGC 70062 ||||| | || ||||| ||||| |||||||| || Sbjct 239 AGACGTTGTACTACCATAACACTCGTGATGGTGC 272 >seq517074 Length=256 Score = 84.2 bits (92), Expect = 1e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 70294 AACGACGCAACGAAGGAACCTATGTTCCTCGGCCAGTCTGTCAACGTAGCACGCTACGAT 70353 ||||| || | ||| |||||||||||| | || | |||| ||||| || || |||||| Sbjct 103 AACGATGCTATGAAAGAACCTATGTTCTTTGGTAACCCTGTTAACGTGGCTCGTTACGAT 162 Query 70354 CAGCAAAAGTACCGTGACTTCGAAAAGCTGATTGAAAAACAACTTTCGTTCTTCTGGCGC 70413 || ||||| | | || || ||||| || ||||| || || || ||||| ||||| Sbjct 163 CAACAAAAATTTGAGGTATTTGAGAAGCTTATCGAAAAGCAGCTGTCTTTCTTTTGGCGT 222 Query 70414 CCTGAAGAAGTCGACATTA 70432 || |||||| | ||| ||| Sbjct 223 CCAGAAGAAATTGACGTTA 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328315729875720