Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_018843.1
Length=103299
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 235 4e-57
seq353462 116 2e-21
seq497288 95.1 8e-15
seq504168 93.3 3e-14
seq517074 84.2 1e-11
>seq449735
Length=3187
Score = 235 bits (260), Expect = 4e-57
Identities = 687/1045 (66%), Gaps = 20/1045 (2%)
Strand=Plus/Plus
Query 68459 TCTCTGCCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTGC 68518
|| || || |||||||||||||| || || || || || || |||||||| | ||
Sbjct 31 TCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGCTCGTGT 90
Query 68519 GTGCTGATTGAAGCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCATC 68578
|| | || || || || || || | |||| ||| | || || ||||| |
Sbjct 91 GTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCAATTGTT 150
Query 68579 GACTACGTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGGC 68638
| ||||| || | || || |||||||| ||| | || || | ||||| |||||
Sbjct 151 AAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCACTGGGT 210
Query 68639 AGTGAGATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACTTC 68698
|| | || ||||||||||| || ||| || || | |||| || || |||||
Sbjct 211 AGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAGCACTTT 270
Query 68699 CAGACGGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTTC 68758
|| || ||||| ||| ||| || || |||||||| || |||||||| || || ||||
Sbjct 271 CAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAACCTTGTTC 330
Query 68759 TATCCGATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCATT 68818
|| ||| | ||||| || ||||| |||| ||| | || || ||||| ||||| || ||
Sbjct 331 TACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGCGGGGTT 390
Query 68819 GAAGAGAACCGCGTTCGTCATCTCGACTATGGCGTGATGATCAACCGTCTGATGTA-TCG 68877
|| || |||||||| |||||| | || || ||||| | | || || ||||| |||
Sbjct 391 GATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATGTACTCG 450
Query 68878 CCGCCTGGTGCGCAACGAAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTA 68937
|| | | |||| ||||||| |||| ||||| |||||||| ||||| ||
Sbjct 451 -CGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATGTGCCAGGCCTTTA 509
Query 68938 CGACGCGTTCTTTGTTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGA 68997
||| || || |||| || || ||| |||| || | ||| || | || |||||| ||
Sbjct 510 CGATGCATTTTTTGAAGACCAAGACGAGTTTGACGCGCTTTATGTAAAATACGAACAAGA 569
Query 68998 CGAGAGCATCCGTAAGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGA 69057
||| || ||||| ||| || || | || |||||||| | | | ||| ||
Sbjct 570 CGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCTCAATGTTTGCGCAAGA 629
Query 69058 GCGTGCCTCCACTGGTCGTGTTTATATTGCCAACGTCGACCACATGAACGATCACGGCGC 69117
||||| || |||||| |||| | ||||| |||||| || ||| || |
Sbjct 630 ACGTGCAAGTACCGGTCGTATTTACTTACAAAACGTTGACCACTGTAATACGCACAGCCC 689
Query 69118 ATTCGTTCCGGAAATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACC 69177
||| || | || | ||||| | | ||| || ||| | ||| | || || | ||||
Sbjct 690 GTTCATTGCTAAAGTGGCACCTATTCGCCAATCTAATTTATGTTTAGAAATTGCATTACC 749
Query 69178 GACCAAGCCACTGG----CGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCC 69233
|| ||||| ||| ||| || ||||| ||| || ||||| ||||| || || |
Sbjct 750 AACTAAGCCGTTGGATAACGTAAAC-GACGA--AGAA-GGCGAAATTGCGCTATGTACAC 805
Query 69234 TGTCTGCGTTCAACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGC---GT 69290
| ||||| || ||| | || || || | || || ||| |||| |||| |
Sbjct 806 TCTCTGCATTTAACTTAGGGGCTATTGAGTCACTAGATGAACTTGAAGAATTGGCTGAGC 865
Query 69291 TTTACGCTGTGGCGGCACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTG 69350
|| ||||| || | || | || || | ||| |||||||| | | ||||
Sbjct 866 TT---GCTGTACGCGCTTTAGATAACTTACTTGATTTTCAAGACTACCCAGTACCGGCTG 922
Query 69351 CAGAAATCCCGGCTAAAGCTCGT-CGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTAC 69409
|| |||| || ||| | |||| |||| ||| || || ||||| | |||| || |||
Sbjct 923 CAAAAATGCC-ACTATGGGTCGTACGTACTCTAGGAATAGGCGTAATTAACTACGCATAC 981
Query 69410 TATCTGGCGAAGAACGGCTTTAACTACTCTGAC-GCTGCGGGCAACCAGCTGGTGCATGA 69468
|| || ||||| ||||| || || || ||| || ||| | || || ||| |
Sbjct 982 TACCTAGCGAAAAACGGTAAGAAATATTCAGACGGCAGCGCAAATGCA-CTAACGCACAA 1040
Query 69469 GACCTTCGAAGCCATTCAGTACTAC 69493
|| || ||||| ||||| ||||||
Sbjct 1041 AACATTTGAAGCGATTCAATACTAC 1065
>seq353462
Length=332
Score = 116 bits (128), Expect = 2e-21
Identities = 195/279 (70%), Gaps = 5/279 (2%)
Strand=Plus/Minus
Query 70333 GTCAACGTAGCACGCTACGATCAGCAAAAGTACCGTGACTTCGAAAAGCTGATTGAAAAA 70392
|||||||| || || ||||| || |||||| ||| | ||| || | ||||||||||
Sbjct 277 GTCAACGTGGCGCGTTACGACCAACAAAAGCACCCTATCTTTGAGCAATTGATTGAAAAG 218
Query 70393 CAACTTTCGTTCTTCTGGCGCCCTGAAGAAGTCGACATTACCAC-TGACCGCATCGACTT 70451
||||| |||||||| ||||| || ||||||||||| || ||| ||| || || || |
Sbjct 217 CAACTGTCGTTCTTTTGGCGTCCAGAAGAAGTCGA-TGTATCACGTGATCGTATGGATT- 160
Query 70452 CAATACCAAGCTGCAAGAGCACGAGCGCCATATTTTCCTGAGCAACCTGCGTTACCAGAC 70511
|| ||| || ||||| | ||||| || | || ||||| || || ||
Sbjct 159 --ATGGCAATTTGTCCTCACACGAACAGCATATCTTTATCAGTAACCTAAAGTATCAAAC 102
Query 70512 GCTGTTGGATTCCGTTCAGGGTCGCAGTCCTAACGCAACACTGCTGCCGCTGATCTCCAT 70571
||| | || || | || ||||| || || |||| || |||| || | || ||
Sbjct 101 GCTACTCGACTCTATCCAAGGTCGTAGCCCAAACGTGGTGCTATTGCCATTGGTATCGAT 42
Query 70572 TCCTGAGCTGGAGACATGGGTCGAGACCTGGTCGTTCTC 70610
||||||||| ||||||||| | ||||| ||| |||| ||
Sbjct 41 TCCTGAGCTTGAGACATGGATTGAGACGTGGACGTTTTC 3
>seq497288
Length=389
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 70480 CATATTTTCCTGAGCAACCTGCGTTACCAGACGCTGTTGGATTCCGTTCAGGGTCGCAGT 70539
||||| || | || ||||| || ||||| || | || || | || ||||| ||
Sbjct 343 CATATCTTTATCAGTAACCTAAAGTATCAGACCCTACTCGACTCTATCCAAGGTCGTAGC 284
Query 70540 CCTAACGCAACACTGCTGCCGCTGATCTCCATTCCTGAGCTGGAGACATGGGTCGAGACC 70599
|| |||| || |||||||| | || ||||||||||| || || ||| | |||||
Sbjct 283 CCAAACGTGGTGCTATTGCCGCTGGTGTCTATTCCTGAGCTTGAAACGTGGATTGAGACG 224
Query 70600 TGGTCGTTCTCCGAGACGATTCACAGCCGCAGCTATACGCACATTATCCGCGGTATGGTG 70659
||| |||| || ||||| |||||| ||||||||||| || || || || ||| |
Sbjct 223 TGGACGTTTTCTGAGACCATTCACTCGCGCAGCTATACCCATATCATTCGTAATATTATC 164
Query 70660 GATGACCCTAGCATCGTTTTCGACGGCATC 70689
|||||||| ||||| || || | ||||
Sbjct 163 AATGACCCTGCTATCGTCTTTGATGACATC 134
>seq504168
Length=536
Score = 93.3 bits (102), Expect = 3e-14
Identities = 186/274 (68%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 69791 AAAGACGGCATCGTGAAGATGGTCGTTCCAGACTTCGCTCAACTGAAAGACCAGTACGAG 69850
|| ||||||||| | ||| ||||| || || | | | || ||| | ||||| |||
Sbjct 1 AAGGACGGCATCCTAAAGCAAGTCGTGCCTGAGATTGACAAGCTAAAAAATCAGTATGAG 60
Query 69851 TACCTGTGGGATATGCCGGATAACCGCGGCTATCT--GACTAAGGTGGCCATCATTCAGA 69908
|| ||| | ||||| | || ||| || || | || ||| || |||| ||||
Sbjct 61 CTACTATGGCAAATGCCAAACAATGACGGTTACCTACGGCT--GGTCGCTGTCATGCAGA 118
Query 69909 AGTTCTTCGATCAGGCCATCTCTGCGAACACCAACTACGACCCGACTCGCTTCCCTGGCG 69968
| ||| ||||||| |||||||| || ||||||||||| || ||| | |||| |
Sbjct 119 AATTCGTCGATCAAAGTATCTCTGCCAATACCAACTACGATCCTGTTCGTTATGCTGGTG 178
Query 69969 ACAAGGTTCCAATGATGAAGCTGCTGGAAGATCTGCTGTTTGCGTATCAGCAAGGTGTGA 70028
| || || |||| || |||| |||| |||| || ||| || |||||||
Sbjct 179 GCCGTGTACCGATGAAGATATTGCTAAAAGACTTGCTAAACGCTTATAAGATGGGTGTGA 238
Query 70029 AGACGCTTTATTACCACAACACGCGTGATGGCGC 70062
||||| | || ||||| ||||| |||||||| ||
Sbjct 239 AGACGTTGTACTACCATAACACTCGTGATGGTGC 272
>seq517074
Length=256
Score = 84.2 bits (92), Expect = 1e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 70294 AACGACGCAACGAAGGAACCTATGTTCCTCGGCCAGTCTGTCAACGTAGCACGCTACGAT 70353
||||| || | ||| |||||||||||| | || | |||| ||||| || || ||||||
Sbjct 103 AACGATGCTATGAAAGAACCTATGTTCTTTGGTAACCCTGTTAACGTGGCTCGTTACGAT 162
Query 70354 CAGCAAAAGTACCGTGACTTCGAAAAGCTGATTGAAAAACAACTTTCGTTCTTCTGGCGC 70413
|| ||||| | | || || ||||| || ||||| || || || ||||| |||||
Sbjct 163 CAACAAAAATTTGAGGTATTTGAGAAGCTTATCGAAAAGCAGCTGTCTTTCTTTTGGCGT 222
Query 70414 CCTGAAGAAGTCGACATTA 70432
|| |||||| | ||| |||
Sbjct 223 CCAGAAGAAATTGACGTTA 241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328315729875720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |