Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq449735 255 7e-63 seq509673 150 2e-31 seq506238 150 2e-31 seq508109 147 2e-30 seq351952 105 8e-18 seq522862 96.9 4e-15 seq128994 95.1 1e-14 >seq449735 Length=3187 Score = 255 bits (282), Expect = 7e-63 Identities = 441/634 (70%), Gaps = 14/634 (2%) Strand=Plus/Plus Query 40707 TAAACTGTCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTC 40766 |||| | ||| |||||||||| |||||||| ||||| ||||| || || || ||||| Sbjct 24 TAAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAG 83 Query 40767 CAGTTGTGTTGTAATCGAATCGGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCCGC 40826 | ||||| |||| || | || || || | ||| | ||||| |||| || Sbjct 84 CTCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGC 143 Query 40827 GATCGTGAAGTATATCTCTCAACGTGCTGGTATTGGTGTCAACGCCGGACACATTCGCGC 40886 || || || || | || |||||||| || ||||| | ||||| || | |||||| || Sbjct 144 AATTGTTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGC 203 Query 40887 TATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTAC-ATACAGGCGTTATCCCGTTCTGGA 40945 ||||| | || || ||| ||||| |||| |||| || ||| || || | | Sbjct 204 ACTGGGTAGCCACATTCGCAATGGCGAAGC-GTACCATACGGGTTGTATTCCTTTTTATA 262 Query 40946 AACACATTCAGACGGCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAA 41005 | ||| |||| || ||||||||| |||||| || |||||||| ||||| || ||||||| Sbjct 263 AGCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAA 322 Query 41006 CCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACC 41065 || ||| || ||| | |||||| | ||||| ||||||||||| || || |||||||||| Sbjct 323 CCTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACC 382 Query 41066 GTGGCGTTGAAGAAAACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGA 41125 | || ||||| || ||||| | ||||| | ||||| ||||||||| |||| | | | Sbjct 383 GCGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAA 442 Query 41126 TGTATAAGCGTTTAATCAATAACGATTACATCACTCTGTTCAGCC---CTGACGTTGCGA 41182 |||| ||||||||| || |||| ||||| || |||| |||| |||| | ||| | Sbjct 443 TGTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATG-TGCCA 501 Query 41183 ACGATCGCCTGTATGACGCGTTCTATCAAGCGGATCAGACTGAGTTTGAAGAACTGTATA 41242 |||| || || || || | | ||| | |||| |||||||| | || ||| Sbjct 502 -----GGCCTTTACGATGCATTTTTTGAAGACCA--AGAC-GAGTTTGACGCGCTTTATG 553 Query 41243 CCAGTCTTGAAAAAGACCCAACGGTACGCAAGAAACGCATCAAAGCGGTAGATCTGTTCC 41302 | ||| ||||| | | | || || |||||||| ||||| | || |||||| Sbjct 554 TAAAATACGAACAAGACGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCT 613 Query 41303 AGTTGCTTGTTCAGGAACGCGCACAGACCGGACG 41336 || ||| || ||||| ||| ||||| || Sbjct 614 CAATGTTTGCGCAAGAACGTGCAAGTACCGGTCG 647 >seq509673 Length=441 Score = 150 bits (166), Expect = 2e-31 Identities = 256/366 (70%), Gaps = 9/366 (2%) Strand=Plus/Minus Query 40900 ATCCGTGGTGGTGAAGCAGTACATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACG 40959 || ||||| || ||||| ||||| || |||||| |||| |||| | || || Sbjct 439 ATTCGTGGCGGCGAAGCGCAGCATACGGGTTGTATCCCATTCTATAAACTGTTCCAAACT 380 Query 40960 GCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41019 || ||||||| ||| || || ||||| || ||||| |||||||| || ||| ||| || Sbjct 379 GCTGTTAAATGCTGCTCACAAGGCGGCGTCCGTGGCGGTGCAGCGACGTTGTTTTACCCA 320 Query 41020 ATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41079 | |||||| | |||||||| | ||||| |||||||||||||| ||||| ||||| Sbjct 319 TTATGGCATTTAGAAGTTGAGTCATTATTGGTACTGAAAAATAACCGCGGCGTGGAAGAC 260 Query 41080 AACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTA 41139 |||||| | ||||| ||||||| ||||||||| | || | ||||| | || | Sbjct 259 AACCGTGTCCGTCATATGGATTACGGCGTACAGTTAAATAAAACTATGTACACTCGCCTC 200 Query 41140 ATCAATAACGATTACATCACTCTGTTCAGCCCTGACGTTGCGAACGATCGCCTGTATGAC 41199 ||||| | ||||| | || ||| || | || | | || ||||||| Sbjct 199 ATCAAAGGTCAAGACATCTCGCTATTCTCACC---AGGTGACACCCCAGGCTTGTATGAT 143 Query 41200 GCGTTCTATCAAGCGGATC-AGACTGAGTTTGAAGAACTGTATACC-AGTCTTGAAAAAG 41257 ||||||| | || |||| |||| | || ||||| || |||||| ||| | ||||| | Sbjct 142 GCGTTCTTTGAA---GATCAAGAC-AAATTCGAAGAGCTATATACCAAGTATCGAAAATG 87 Query 41258 ACCCAA 41263 |||||| Sbjct 86 ACCCAA 81 >seq506238 Length=275 Score = 150 bits (166), Expect = 2e-31 Identities = 137/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 51003 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51062 |||||||| ||||| |||||||| || ||||| || || ||||| ||||||||||||| Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162 Query 51063 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51122 || || || |||||||| ||||| ||||| || ||||| || || || ||||||||||| Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102 Query 51123 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGA 51175 || ||| | || || |||||||||| ||||| | | || || |||||||| Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGA 49 >seq508109 Length=334 Score = 147 bits (162), Expect = 2e-30 Identities = 218/307 (71%), Gaps = 4/307 (1%) Strand=Plus/Minus Query 90663 CCGCGTCCCTTTTGTTTCAGTCCCAGGAACACGATCGCATTAAC--TCGTTTCAGGCGTG 90720 ||||| |||||||| |||| | | |||||| || ||||| || | | | | |||| Sbjct 305 CCGCGACCCTTTTGCTTCAATGATAAGAACACAATAGCATTTACATTAGCT--AATCGTG 248 Query 90721 GATCATTCTTCACAGCGTCAACCACGTTAAACGCGTCATCATAGGTTTTAGAGCTAACCA 90780 | ||| | |||| ||| ||| || || |||| || ||| || | || | || Sbjct 247 GGTCAGTTTTCATAGCTTCAGTTACAGTATACGCATCTTCAATAGTACGACCACTGATCA 188 Query 90781 TGAAATGAAGGTTGATTTGCTGTTGTCCGGCTTCTGTCAGGTTCGCTACGGAGTCGAAAG 90840 | || || ||||||||||||| ||| || || | || | ||| || ||| || | Sbjct 187 TAAAGTGTAGGTTGATTTGCTTTTGACCAGCAGCGGTTAAACGCGCAACACTGTCAAACG 128 Query 90841 CGACATCAAAGCCAGCGTGTTTATAAACAGATACCGCAACAGCCCCAGCAACCGCCGCTA 90900 | |||||||| ||||||||||||||||| ||||| |||| ||| |||||||| | |||| Sbjct 127 CTACATCAAAACCAGCGTGTTTATAAACTGATACAGCAATAGCACCAGCAACTGATGCTA 68 Query 90901 AACGCGCTGCAACGTCTTTTGATACATCAGCAATGGTAAGGTTCGGCACAATGCCTTTAG 90960 | || ||||| |||| ||| ||||||||||| || || || || | ||| |||| | Sbjct 67 ATTTAGCAGCAACTTCTTCTGACACATCAGCAATTGTTAGATTTGGGATAATACCTTGTG 8 Query 90961 AACGCGC 90967 |||| || Sbjct 7 AACGAGC 1 >seq351952 Length=416 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 51003 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51062 |||||||| |||||||||||||| || || || ||| |||| | ||||| || Sbjct 203 GAAGGTGGTCAACACTTAAACGTTAATGTAATGAACCGTGAAATGTTATTGGATGCAATG 144 Query 51063 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51122 | ||||||| || || ||||| ||||| || ||||| || || || ||||| || || Sbjct 143 GAAAATCCAGATAAGTATCCACAATTAACAATTCGTGTATCGGGTTACGCAGTACGATTT 84 Query 51123 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTA 51182 || || | ||| | |||||| ||| || || ||| | || |||||||||| || ||| Sbjct 83 AACTCGTTAACTGCAGAACAAAAGCAAGATGTAATCACACGTACCTTTACAGCGACGCTA 24 Query 51183 TAA 51185 ||| Sbjct 23 TAA 21 >seq522862 Length=256 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 43096 TCAAACCTACAATATCAAACCCTGTTGGATACCATTCAGGGACGCGGCCCTAACCTGGCT 43155 |||||||| |||||||||| || || || | || ||||| || | |||||| |||| Sbjct 2 TCAAACCTGAAATATCAAACACTATTAGACTCGATACAGGGTCGTAGTCCTAACATGGCA 61 Query 43156 TTCCTCCCTATCGCTTCCGATGTCTCAATG-GAAACGTGGATCGAAACATGGGCGTTCAG 43214 || || || |||| ||| | || | | || || ||||||||||| ||| | ||||| Sbjct 62 TTACTTCCGATCGTATCCT-TACCTGAGTTAGAGACATGGATCGAAACCTGGTCCTTCAG 120 Query 43215 TGAAACAACCCATAGCCGCAGTTACACGCACATTCAGCGCAACCTACACATCGACCCGTC 43274 ||| || | ||| |||| || ||||| || |||| || ||| || | |||||||| Sbjct 121 TGAGACTATCCACAGCCAGAGCTACACACATATTCTTCGTAACATATTCGATGACCCGTC 180 Query 43275 GAAAGAGTTCGATAAGATTCTGCGCAACGAAGCGATCATGAAACGTTCTGCTTCCATGAC 43334 ||| | | ||| | ||| | |||| | | ||| |||||| |||| | || | Sbjct 181 TGAAGTGCTAGATGATATTGTCAGCAATGTTGAGATACAGAAACGAGCTGCACCAATCGC 240 Query 43335 AAAATACTACGATGA 43349 || || || ||||| Sbjct 241 AAGCTATTATGATGA 255 >seq128994 Length=861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 193/285 (68%), Gaps = 4/285 (1%) Strand=Plus/Minus Query 43487 TGTATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATCCGCTTCTACGTGTCGTTTA 43546 ||||| |||| ||| | ||||| || | |||||||| |||||||| || ||| Sbjct 474 TGTATTTGTGCATGATGTCAGTCAATGCCTTAGAAGCGATTCGCTTCTATGTCAGTTTTG 415 Query 43547 CCTTCACGTTCAACTTTGCCGAACAAGGCAAGATGGAAGGTAACGCGAAGATCATGCGTC 43606 ||| |||| |||||| |||| | ||||||||||| || || || || || Sbjct 414 CCTGTTCGTTTGCCTTTGCTGAACGTCGTGTTATGGAAGGTAATGCTAAAATTATTCGCT 355 Query 43607 TGATTGCCCGTGATGAAGCACTTCATCAGAAAGGCACTCAAAGCAAGATCCGACTCTG-- 43664 | ||||||||||||||||| | || | || | || ||| || | ||||| Sbjct 354 TAATTGCCCGTGATGAAGCCTTACACCTCAATAGTACACAA--CACATTTTAGCTCTGAT 297 Query 43665 GCAGATGGGTAAAGATGACCCAGAAATGGCGGAAATCGCTTACCAGTACGAAGAAGAAGC 43724 |||| |||||||| ||||||||||||| ||||| ||| ||| | ||||||| Sbjct 296 GCAGGGTGGTAAAGACGACCCAGAAATGGGAGAAATTGCTGCTGAGTGTAAGCAAGAAGC 237 Query 43725 GACAAAGATTTTCCTGGAAGTGTACGAACAGGAAAAAGAATGGGC 43769 | | | ||| | ||| | ||||| |||||||||||||| Sbjct 236 GTATGACTTATTCGTCAAAGCGGCGGAACAAGAAAAAGAATGGGC 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566344809687760