Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019398.1
Length=178193
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 255 7e-63
seq509673 150 2e-31
seq506238 150 2e-31
seq508109 147 2e-30
seq351952 105 8e-18
seq522862 96.9 4e-15
seq128994 95.1 1e-14
>seq449735
Length=3187
Score = 255 bits (282), Expect = 7e-63
Identities = 441/634 (70%), Gaps = 14/634 (2%)
Strand=Plus/Plus
Query 40707 TAAACTGTCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTC 40766
|||| | ||| |||||||||| |||||||| ||||| ||||| || || || |||||
Sbjct 24 TAAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAG 83
Query 40767 CAGTTGTGTTGTAATCGAATCGGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCCGC 40826
| ||||| |||| || | || || || | ||| | ||||| |||| ||
Sbjct 84 CTCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGC 143
Query 40827 GATCGTGAAGTATATCTCTCAACGTGCTGGTATTGGTGTCAACGCCGGACACATTCGCGC 40886
|| || || || | || |||||||| || ||||| | ||||| || | |||||| ||
Sbjct 144 AATTGTTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGC 203
Query 40887 TATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTAC-ATACAGGCGTTATCCCGTTCTGGA 40945
||||| | || || ||| ||||| |||| |||| || ||| || || | |
Sbjct 204 ACTGGGTAGCCACATTCGCAATGGCGAAGC-GTACCATACGGGTTGTATTCCTTTTTATA 262
Query 40946 AACACATTCAGACGGCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAA 41005
| ||| |||| || ||||||||| |||||| || |||||||| ||||| || |||||||
Sbjct 263 AGCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAA 322
Query 41006 CCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACC 41065
|| ||| || ||| | |||||| | ||||| ||||||||||| || || ||||||||||
Sbjct 323 CCTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACC 382
Query 41066 GTGGCGTTGAAGAAAACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGA 41125
| || ||||| || ||||| | ||||| | ||||| ||||||||| |||| | | |
Sbjct 383 GCGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAA 442
Query 41126 TGTATAAGCGTTTAATCAATAACGATTACATCACTCTGTTCAGCC---CTGACGTTGCGA 41182
|||| ||||||||| || |||| ||||| || |||| |||| |||| | ||| |
Sbjct 443 TGTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATG-TGCCA 501
Query 41183 ACGATCGCCTGTATGACGCGTTCTATCAAGCGGATCAGACTGAGTTTGAAGAACTGTATA 41242
|||| || || || || | | ||| | |||| |||||||| | || |||
Sbjct 502 -----GGCCTTTACGATGCATTTTTTGAAGACCA--AGAC-GAGTTTGACGCGCTTTATG 553
Query 41243 CCAGTCTTGAAAAAGACCCAACGGTACGCAAGAAACGCATCAAAGCGGTAGATCTGTTCC 41302
| ||| ||||| | | | || || |||||||| ||||| | || ||||||
Sbjct 554 TAAAATACGAACAAGACGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTGTTCT 613
Query 41303 AGTTGCTTGTTCAGGAACGCGCACAGACCGGACG 41336
|| ||| || ||||| ||| ||||| ||
Sbjct 614 CAATGTTTGCGCAAGAACGTGCAAGTACCGGTCG 647
>seq509673
Length=441
Score = 150 bits (166), Expect = 2e-31
Identities = 256/366 (70%), Gaps = 9/366 (2%)
Strand=Plus/Minus
Query 40900 ATCCGTGGTGGTGAAGCAGTACATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACG 40959
|| ||||| || ||||| ||||| || |||||| |||| |||| | || ||
Sbjct 439 ATTCGTGGCGGCGAAGCGCAGCATACGGGTTGTATCCCATTCTATAAACTGTTCCAAACT 380
Query 40960 GCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41019
|| ||||||| ||| || || ||||| || ||||| |||||||| || ||| ||| ||
Sbjct 379 GCTGTTAAATGCTGCTCACAAGGCGGCGTCCGTGGCGGTGCAGCGACGTTGTTTTACCCA 320
Query 41020 ATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41079
| |||||| | |||||||| | ||||| |||||||||||||| ||||| |||||
Sbjct 319 TTATGGCATTTAGAAGTTGAGTCATTATTGGTACTGAAAAATAACCGCGGCGTGGAAGAC 260
Query 41080 AACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTA 41139
|||||| | ||||| ||||||| ||||||||| | || | ||||| | || |
Sbjct 259 AACCGTGTCCGTCATATGGATTACGGCGTACAGTTAAATAAAACTATGTACACTCGCCTC 200
Query 41140 ATCAATAACGATTACATCACTCTGTTCAGCCCTGACGTTGCGAACGATCGCCTGTATGAC 41199
||||| | ||||| | || ||| || | || | | || |||||||
Sbjct 199 ATCAAAGGTCAAGACATCTCGCTATTCTCACC---AGGTGACACCCCAGGCTTGTATGAT 143
Query 41200 GCGTTCTATCAAGCGGATC-AGACTGAGTTTGAAGAACTGTATACC-AGTCTTGAAAAAG 41257
||||||| | || |||| |||| | || ||||| || |||||| ||| | ||||| |
Sbjct 142 GCGTTCTTTGAA---GATCAAGAC-AAATTCGAAGAGCTATATACCAAGTATCGAAAATG 87
Query 41258 ACCCAA 41263
||||||
Sbjct 86 ACCCAA 81
>seq506238
Length=275
Score = 150 bits (166), Expect = 2e-31
Identities = 137/173 (79%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 51003 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51062
|||||||| ||||| |||||||| || ||||| || || ||||| |||||||||||||
Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162
Query 51063 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51122
|| || || |||||||| ||||| ||||| || ||||| || || || |||||||||||
Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102
Query 51123 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGA 51175
|| ||| | || || |||||||||| ||||| | | || || ||||||||
Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGA 49
>seq508109
Length=334
Score = 147 bits (162), Expect = 2e-30
Identities = 218/307 (71%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 90663 CCGCGTCCCTTTTGTTTCAGTCCCAGGAACACGATCGCATTAAC--TCGTTTCAGGCGTG 90720
||||| |||||||| |||| | | |||||| || ||||| || | | | | ||||
Sbjct 305 CCGCGACCCTTTTGCTTCAATGATAAGAACACAATAGCATTTACATTAGCT--AATCGTG 248
Query 90721 GATCATTCTTCACAGCGTCAACCACGTTAAACGCGTCATCATAGGTTTTAGAGCTAACCA 90780
| ||| | |||| ||| ||| || || |||| || ||| || | || | ||
Sbjct 247 GGTCAGTTTTCATAGCTTCAGTTACAGTATACGCATCTTCAATAGTACGACCACTGATCA 188
Query 90781 TGAAATGAAGGTTGATTTGCTGTTGTCCGGCTTCTGTCAGGTTCGCTACGGAGTCGAAAG 90840
| || || ||||||||||||| ||| || || | || | ||| || ||| || |
Sbjct 187 TAAAGTGTAGGTTGATTTGCTTTTGACCAGCAGCGGTTAAACGCGCAACACTGTCAAACG 128
Query 90841 CGACATCAAAGCCAGCGTGTTTATAAACAGATACCGCAACAGCCCCAGCAACCGCCGCTA 90900
| |||||||| ||||||||||||||||| ||||| |||| ||| |||||||| | ||||
Sbjct 127 CTACATCAAAACCAGCGTGTTTATAAACTGATACAGCAATAGCACCAGCAACTGATGCTA 68
Query 90901 AACGCGCTGCAACGTCTTTTGATACATCAGCAATGGTAAGGTTCGGCACAATGCCTTTAG 90960
| || ||||| |||| ||| ||||||||||| || || || || | ||| |||| |
Sbjct 67 ATTTAGCAGCAACTTCTTCTGACACATCAGCAATTGTTAGATTTGGGATAATACCTTGTG 8
Query 90961 AACGCGC 90967
|||| ||
Sbjct 7 AACGAGC 1
>seq351952
Length=416
Score = 105 bits (116), Expect = 8e-18
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 51003 GAAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTG 51062
|||||||| |||||||||||||| || || || ||| |||| | ||||| ||
Sbjct 203 GAAGGTGGTCAACACTTAAACGTTAATGTAATGAACCGTGAAATGTTATTGGATGCAATG 144
Query 51063 AAGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTC 51122
| ||||||| || || ||||| ||||| || ||||| || || || ||||| || ||
Sbjct 143 GAAAATCCAGATAAGTATCCACAATTAACAATTCGTGTATCGGGTTACGCAGTACGATTT 84
Query 51123 AATTCACTGACTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACAGAGAGTCTA 51182
|| || | ||| | |||||| ||| || || ||| | || |||||||||| || |||
Sbjct 83 AACTCGTTAACTGCAGAACAAAAGCAAGATGTAATCACACGTACCTTTACAGCGACGCTA 24
Query 51183 TAA 51185
|||
Sbjct 23 TAA 21
>seq522862
Length=256
Score = 96.9 bits (106), Expect = 4e-15
Identities = 176/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 43096 TCAAACCTACAATATCAAACCCTGTTGGATACCATTCAGGGACGCGGCCCTAACCTGGCT 43155
|||||||| |||||||||| || || || | || ||||| || | |||||| ||||
Sbjct 2 TCAAACCTGAAATATCAAACACTATTAGACTCGATACAGGGTCGTAGTCCTAACATGGCA 61
Query 43156 TTCCTCCCTATCGCTTCCGATGTCTCAATG-GAAACGTGGATCGAAACATGGGCGTTCAG 43214
|| || || |||| ||| | || | | || || ||||||||||| ||| | |||||
Sbjct 62 TTACTTCCGATCGTATCCT-TACCTGAGTTAGAGACATGGATCGAAACCTGGTCCTTCAG 120
Query 43215 TGAAACAACCCATAGCCGCAGTTACACGCACATTCAGCGCAACCTACACATCGACCCGTC 43274
||| || | ||| |||| || ||||| || |||| || ||| || | ||||||||
Sbjct 121 TGAGACTATCCACAGCCAGAGCTACACACATATTCTTCGTAACATATTCGATGACCCGTC 180
Query 43275 GAAAGAGTTCGATAAGATTCTGCGCAACGAAGCGATCATGAAACGTTCTGCTTCCATGAC 43334
||| | | ||| | ||| | |||| | | ||| |||||| |||| | || |
Sbjct 181 TGAAGTGCTAGATGATATTGTCAGCAATGTTGAGATACAGAAACGAGCTGCACCAATCGC 240
Query 43335 AAAATACTACGATGA 43349
|| || || |||||
Sbjct 241 AAGCTATTATGATGA 255
>seq128994
Length=861
Score = 95.1 bits (104), Expect = 1e-14
Identities = 193/285 (68%), Gaps = 4/285 (1%)
Strand=Plus/Minus
Query 43487 TGTATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATCCGCTTCTACGTGTCGTTTA 43546
||||| |||| ||| | ||||| || | |||||||| |||||||| || |||
Sbjct 474 TGTATTTGTGCATGATGTCAGTCAATGCCTTAGAAGCGATTCGCTTCTATGTCAGTTTTG 415
Query 43547 CCTTCACGTTCAACTTTGCCGAACAAGGCAAGATGGAAGGTAACGCGAAGATCATGCGTC 43606
||| |||| |||||| |||| | ||||||||||| || || || || ||
Sbjct 414 CCTGTTCGTTTGCCTTTGCTGAACGTCGTGTTATGGAAGGTAATGCTAAAATTATTCGCT 355
Query 43607 TGATTGCCCGTGATGAAGCACTTCATCAGAAAGGCACTCAAAGCAAGATCCGACTCTG-- 43664
| ||||||||||||||||| | || | || | || ||| || | |||||
Sbjct 354 TAATTGCCCGTGATGAAGCCTTACACCTCAATAGTACACAA--CACATTTTAGCTCTGAT 297
Query 43665 GCAGATGGGTAAAGATGACCCAGAAATGGCGGAAATCGCTTACCAGTACGAAGAAGAAGC 43724
|||| |||||||| ||||||||||||| ||||| ||| ||| | |||||||
Sbjct 296 GCAGGGTGGTAAAGACGACCCAGAAATGGGAGAAATTGCTGCTGAGTGTAAGCAAGAAGC 237
Query 43725 GACAAAGATTTTCCTGGAAGTGTACGAACAGGAAAAAGAATGGGC 43769
| | | ||| | ||| | ||||| ||||||||||||||
Sbjct 236 GTATGACTTATTCGTCAAAGCGGCGGAACAAGAAAAAGAATGGGC 192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566344809687760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |